Agrobacterium pusense IRBG74: BN877_II0291
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Entry
BN877_II0291 CDS
T02867
Symbol
nth
Name
(GenBank) endonuclease III DNA-(apurinic or apyrimidinic site) lyase
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
rir
Agrobacterium pusense IRBG74
Pathway
rir03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rir00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BN877_II0291 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rir03400
]
BN877_II0291 (nth)
Enzymes [BR:
rir01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
BN877_II0291 (nth)
DNA repair and recombination proteins [BR:
rir03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BN877_II0291 (nth)
Prokaryotic type
BN877_II0291 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
Motif
Other DBs
NCBI-ProteinID:
CDI10091
UniProt:
U4Q8J7
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All DBs
Position
linear:285301..286083
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AA seq
260 aa
AA seq
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MTIAKKRSSTQTLKKSNPAAARRPARVKTAYSREELSEIFRRFSIQRPEPKGELEHTNPF
TLLVAVALSAQATDVGVNRATRALFKVADTPEKMLALGEEQLIGYIKTIGLYRNKAKNVI
ALSQMLIDNFGGEVPKTRDELVTLPGVGRKTANVVMSMAFGVPTLAVDTHVFRIANRLCL
APGKTPDEVEDRLIRIIPEEYLFHAHHWLILHGRYCCKARKPECERCVIADICKSPEKTF
DIPAPLVELPAQLFGSAGGE
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgacaatcgccaagaaacgatccagcacccaaaccttgaaaaagtcaaatccggcagcc
gcacgcaggccggcgcgggtgaagacggcctattccagggaggagctcagcgaaatcttc
cgccgcttttccatccagcggccggaaccgaaaggcgagctggaacataccaatcccttc
accctgctcgtggccgtggcgctatccgcacaggcgaccgatgtgggcgtgaaccgggcc
acccgcgcgctgttcaaggtggccgatacgccggaaaagatgctggcgctcggcgaggaa
cagctgatcggttacatcaagaccatcgggctttaccgtaacaaggcgaaaaacgtcatt
gccctgtcgcagatgctgatcgacaatttcggcggcgaggtgccgaagacccgcgacgaa
ctggtgacgcttcccggtgtcggccgcaagacggccaatgtggtgatgtcgatggccttc
ggcgtgcccacgcttgcggtggacacacatgtgttccgcatcgccaaccggctctgtctt
gcgccgggcaagacccctgacgaggttgaagaccggctgatccgcatcattcccgaagaa
tatctgttccatgcccatcactggctgatcctgcacgggcgttactgctgcaaggcacgc
aagccggaatgcgagcgctgcgtgattgccgatatctgcaaatcgccggaaaaaaccttc
gatattccggcaccgctggtggaattacccgcgcagctgttcggttcggctggcggcgaa
tga
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