Rahnella inusitata: I2123_11195
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Entry
I2123_11195 CDS
T09790
Symbol
rlmC
Name
(GenBank) 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC
KO
K03212
23S rRNA (uracil747-C5)-methyltransferase [EC:
2.1.1.189
]
Organism
riu
Rahnella inusitata
Brite
KEGG Orthology (KO) [BR:
riu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
riu03009
]
I2123_11195 (rlmC)
Enzymes [BR:
riu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.189 23S rRNA (uracil747-C5)-methyltransferase
I2123_11195 (rlmC)
Ribosome biogenesis [BR:
riu03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
I2123_11195 (rlmC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
MTS
Methyltransf_25
Cons_hypoth95
Methyltransf_12
Methyltransf_15
Methyltransf_11
Methyltransf_4
Motif
Other DBs
NCBI-ProteinID:
QUT13316
LinkDB
All DBs
Position
2381129..2382271
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AA seq
380 aa
AA seq
DB search
MHCALYTAGTCRSCQWLDKPYSRQLADKQQDLHDLLSGMPVGEWCEPVTGEEREFRNKAK
MVVSGSVERPLLGMLHRDGTPVDLCDCPLYPASFPAVFAVLKTFIARAGLTPYNVARKRG
ELKFLLLTESQKDGGMMLRFVLRSETKLTQLRAALPWLQQQLPQLKVISANLQPVHMAIL
EGDTEIPLTDVQRLEEEFNHVPLFIRPQSFFQTNAQVAEKLYATARDWVRECGNIGSMWD
LFCGVGGFGLHCATPDMTLTGIEISAEAISCAKESAARLGLRNVEFQALDSTGFATGKGE
VPDLVLVNPPRRGIGKTLCDYLSQMAPATVLYSSCNAKTMAADLALLPDYRIERVQLFDM
FPHTAHYEVMALLIRESADK
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgcattgcgctctctacaccgccggaacctgtcgctcctgccagtggctcgacaaacct
tactcccgccagctggccgataaacagcaagacctgcacgatttgctgagcggaatgccg
gtaggggagtggtgcgaaccggtaacaggcgaagagcgcgaatttcgcaataaagccaaa
atggtggtcagtggcagcgtggagcgtccgctgctcggcatgttacatcgcgacggcacg
ccggtggatttgtgcgattgcccgctgtatccggccagctttccggcggtctttgccgta
ctcaaaacctttatcgcccgcgcaggtctgacgccctataacgtcgcgcgtaaacgcggc
gaattgaaattcctgttgctgaccgaaagccagaaggacggcggcatgatgctgcggttt
gtcctgcgttcagagaccaaactgacccaactgcgcgcggcgttgccgtggctgcaacag
cagctgccgcagttgaaggttatttccgccaatcttcagccggtgcatatggcgatcctc
gaaggggatacggaaattcctttgactgacgttcagcgtctggaagaggaattcaaccat
gtgccgctgtttattcgcccgcaaagcttcttccagaccaatgcgcaggtggcggaaaaa
ctgtacgccacggcgcgcgattgggtgcgtgagtgcggtaacatcggcagtatgtgggat
ctgttctgcggcgtcggtggttttggtctgcactgcgcgacacccgacatgacgctgacc
gggatcgaaatcagtgccgaagccatctcgtgtgcaaaagaatccgccgcgcggctgggg
ctgcgaaacgttgaatttcaggcgctggactccaccggttttgccaccggcaaaggagaa
gtgccggacctggtcctggttaatccgccacgtcgcggcattggaaaaacgctgtgcgat
tacctgagccagatggcgcctgcgacggtactctattccagctgcaatgcgaaaactatg
gcagccgatctggccttgctgccggattaccgcatcgaacgcgttcagttgttcgacatg
tttccgcataccgcacattatgaagtaatggcattactcattcgcgagtcagccgataaa
taa
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