Rivularia sp. PCC 7116: Riv7116_0703
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Entry
Riv7116_0703 CDS
T02364
Name
(GenBank) RND family efflux transporter, MFP subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
riv
Rivularia sp. PCC 7116
Pathway
riv01501
beta-Lactam resistance
riv01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
riv00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Riv7116_0703
01503 Cationic antimicrobial peptide (CAMP) resistance
Riv7116_0703
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
riv03036
]
Riv7116_0703
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
riv02000
]
Riv7116_0703
01504 Antimicrobial resistance genes [BR:
riv01504
]
Riv7116_0703
Chromosome and associated proteins [BR:
riv03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
Riv7116_0703
Transporters [BR:
riv02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
Riv7116_0703
Antimicrobial resistance genes [BR:
riv01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
Riv7116_0703
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSH_RND
YknX_C
BSH_CzcB
Biotin_lipoyl
Beta-barrel_RND
BSH_CusB
Beta-barrel_RND_2
CzcB_C
BSH_YknX
HH_AprE
PYNP_C
RND-MFP_C
RnfC_N
DUF4131
PBP1_TM
PTS_EIIA_1
HH_EMRA
DUF7194
Motif
Other DBs
NCBI-ProteinID:
AFY53292
LinkDB
All DBs
Position
complement(892217..893542)
Genome browser
AA seq
441 aa
AA seq
DB search
MTSLPPENVIAEDENQLEKPPEPPRKKRWWFWLLLALLLLGGGGFAAFRMISGGEQKPAA
QNPEARKIPVKLATVAEGIIEDRDEYIARLESRRSVTLQPQTQGRINKILVNSGDKVQAG
NPIMQIDSRQQQAAVNSVDAAAQAARSELQNAIATLKSLQAEKLSNVADVNLNQQEYERY
TSLAAQGAVSQQTRQQYVNRLATAKARLNAIDAQIQAQQASINRAEKALKQAQANTKQQQ
VQLQYYTVSAPIAGQVGDLLVKLGDVVNTSSQLTTITQNNPLQVEISVPQERAAELRKGM
PIELVDNQGKILGRSQVFFISPNVNQNTQSILVKALFENQNNQLRADEYVRARVIWQRRP
GVLIPATAVVRLAGETFVYVAKKPDSSLENPDFIAKQKRVKLGNIRGNNYQVLEGLMQGE
RIIVSGILNLRDGAQIIPDSK
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgacatctctaccaccagaaaatgtaattgcagaagacgaaaatcaactagaaaaacct
cccgaaccacctcgtaaaaaacgatggtggttttggttattgcttgccctgcttctgtta
ggaggtggtggttttgcggcgtttcgtatgatatctggaggagagcaaaaaccagcagca
caaaaccctgaagctagaaaaataccggtaaaactagctacggtagcagaagggataatt
gaagatagagatgaatacatcgccagattggaatcgcgacgttcggttactctccagcct
caaacacaagggagaatcaataagattttggttaattctggagataaagtacaagctggc
aatccgataatgcagattgattcgaggcaacaacaagcagcagttaacagtgtagatgca
gcagcacaagccgctcgctctgaattacaaaacgcgatcgcgactttaaaatctttgcaa
gctgagaaattgtctaatgttgccgatgtaaatttgaatcagcaggaatatgaaagatat
acgagtttggcagcccaaggagcagtatcgcaacaaactaggcagcagtatgtgaatagg
cttgctacagcaaaagcgaggttgaatgcaattgatgctcaaattcaagcgcaacaagct
tccattaatcgagccgaaaaagcattaaaacaagctcaagcaaataccaaacagcaacaa
gtccagcttcaatactatacagtttccgctccaattgccggacaagttggcgacttgcta
gtcaagcttggcgatgtcgttaatacatcttcgcagctaactactattactcaaaataat
cctttgcaagttgaaatatcggtaccccaagagcgtgcggcagaattacgtaaaggaatg
cctatagagttagttgataatcaagggaaaattttgggcaggagtcaagtctttttcatc
tctcctaacgttaatcaaaatactcaatcaatactggttaaagcattgtttgagaaccaa
aataatcaattaagagcagacgaatacgttcgcgccagagtaatttggcagcgccgccct
ggtgtattaattccagcaaccgcagtggtgcgtttagctggagaaacttttgtatatgtt
gccaaaaagcccgattcatcattagaaaatccagatttcatcgcaaaacagaagcgcgtt
aaattaggtaatatccggggtaataattatcaagttttagaaggcttaatgcagggagaa
agaattattgtttccggcattttgaatttaagagatggagcgcagataattccagattct
aaatga
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