Rivularia sp. PCC 7116: Riv7116_0829
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Entry
Riv7116_0829 CDS
T02364
Name
(GenBank) RND family efflux transporter, MFP subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
riv
Rivularia sp. PCC 7116
Pathway
riv01501
beta-Lactam resistance
riv01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
riv00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Riv7116_0829
01503 Cationic antimicrobial peptide (CAMP) resistance
Riv7116_0829
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
riv03036
]
Riv7116_0829
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
riv02000
]
Riv7116_0829
01504 Antimicrobial resistance genes [BR:
riv01504
]
Riv7116_0829
Chromosome and associated proteins [BR:
riv03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
Riv7116_0829
Transporters [BR:
riv02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
Riv7116_0829
Antimicrobial resistance genes [BR:
riv01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
Riv7116_0829
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-barrel_RND_2
BSH_RND
CzcB_C
YknX_C
RND-MFP_C
Beta-barrel_YknX
HH_EMRA
BSH_CusB
BSH_Fcp1
BSH_CzcB
Beta-barrel_AprE
Biotin_lipoyl
BSH_YhbJ
Motif
Other DBs
NCBI-ProteinID:
AFY53413
LinkDB
All DBs
Position
1057166..1058566
Genome browser
AA seq
466 aa
AA seq
DB search
MYNQRQHFKIAKKSIQKDSRTSQDVCEKINIFTSQLLIKTKKNLLRSSSIFCAFPLTISL
LIAGCDSAPKETAQATSKRRGGATAVDTAIAKKAQLDKQISYIGTTLPYRKISVRSQIEG
QLLALNVDVGVMVSKGYIIGLIDDSLLNSSLNQAEAELAALNSEVARANTQVSNALTEVE
RARLQLQQAQSDAQRQQKLLSEGAIAQQIAEQSRTEAQTAAKALRLAEKRVQTERQAVAA
AKGRVVAQQAVVAQAKERKSYAKLTSPIAGVVLEKIIEPGNLVQPGNEIIKIGDFSKVKI
EIQVSELELGKLEVGQSVEVLLDAFPNQEYIGTLKRISPAANSTARLIPVEVVIPNVENK
IGSGLLARANFQNTANQQIVVPFRAIQTEDKLGSNLQGKIFTVVEDGNKNKVKVRSVTLG
KKADGKVEILSGLQPGESYVVRSSKPLKDGENVRLSILSETVNSEQ
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgtacaatcaaagacagcatttcaagattgcgaaaaagtctattcaaaaagatagtaga
acttcccaagatgtttgtgaaaaaataaatatatttacaagccagttattaataaaaact
aagaaaaatttattacgttctagctcaattttctgtgcgtttcctttaactattagttta
ttaattgcaggttgtgattcagcacccaaagaaaccgctcaagccacatctaagcgtcgt
ggtggtgcaactgccgtagatacagctattgctaaaaaagcacaattagacaagcaaata
tcttatatcggaaccaccctgccataccgcaaaatatcggtgcgatcgcaaatagaaggg
cagttattagcgttgaatgtagacgtaggggtaatggtttctaaaggttatattatcgga
ttaattgatgattccttgctcaatagttcgttaaatcaagcagaagcggaacttgcagcc
ctaaattcagaagtagccagagcaaatactcaagttagtaacgctttgacagaagtagaa
agagcgcgattgcaattgcagcaagctcaatcggatgctcaaagacagcaaaagttgctt
tctgaaggcgcaattgctcaacaaatagccgaacaaagccgtaccgaagctcaaacagca
gcaaaagcgctgcgtttagcagaaaaaagagtgcaaacagagcgtcaagcagtcgctgct
gccaaaggaagagtagtcgcacagcaagcggtagtggctcaagcaaaagaacgtaaaagt
tacgctaaattaacatctccaattgcaggtgtagttttagaaaaaattattgaaccgggt
aacttagttcaacccggtaatgaaattattaagataggcgattttagtaaggtaaaaata
gaaattcaagtttcagagttagagttaggaaaacttgaagttggacaatccgtagaagtt
ttattagatgcttttcccaaccaagaatatataggtactttaaaacgcatttctccagca
gcaaattcaacggctcgtttaatacctgtagaagtagtaattcccaatgttgagaataaa
attggtagtggtttattagcaagagccaactttcagaatacagctaatcagcaaattgtc
gtaccattcagagcaattcaaacagaagataaattaggttcaaatcttcaaggtaaaata
tttactgttgtagaagatggtaataagaataaagtaaaagtcagaagcgtcacattaggg
aaaaaagcagacgggaaagtagaaattttatcgggattgcagccgggagaatcctatgta
gtcagaagtagcaaacctttaaaagacggtgaaaatgtacgtttgtccattctttcggaa
acagtgaacagtgagcagtga
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