Rhinichthys klamathensis goyatoka (western speckled dace): 130069207
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Entry
130069207 CDS
T09701
Symbol
pdgfab
Name
(RefSeq) platelet-derived growth factor alpha polypeptide b isoform X1
KO
K04359
platelet-derived growth factor subunit A
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg04010
MAPK signaling pathway
rkg04020
Calcium signaling pathway
rkg04510
Focal adhesion
rkg04540
Gap junction
rkg04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
130069207 (pdgfab)
04020 Calcium signaling pathway
130069207 (pdgfab)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
130069207 (pdgfab)
04540 Gap junction
130069207 (pdgfab)
09142 Cell motility
04810 Regulation of actin cytoskeleton
130069207 (pdgfab)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
rkg04052
]
130069207 (pdgfab)
00536 Glycosaminoglycan binding proteins [BR:
rkg00536
]
130069207 (pdgfab)
Cytokines and neuropeptides [BR:
rkg04052
]
Cytokines
Growth factors (RTK binding)
130069207 (pdgfab)
Glycosaminoglycan binding proteins [BR:
rkg00536
]
Heparan sulfate / Heparin
Growth factors/receptors
130069207 (pdgfab)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDGF_N
PDGF
TraY
LOH1CR12
Motif
Other DBs
NCBI-GeneID:
130069207
NCBI-ProteinID:
XP_056088933
LinkDB
All DBs
Position
Unknown
AA seq
230 aa
AA seq
DB search
MRTLFCCFLLLTSHLLLATAEKEFAIPQDFIDRLSHSEINSISDLQRLLEVNSPGPGNEV
IEEVKQKHHQKNHHSYKAGSSDLKSLQLSHRRKRSVVEEAVPAMCKTRTVIHEIPRSQVD
PTAANFLIWPPCVEVKRCTGCCNTGNMRCHPSKKHHRTVKVAKVEFSSRKKAKLKEVLVR
LEDHLECVCTSQHHVMEHVEADAGPLTVKNGKKRKHRKHAVAAQINKDIQ
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgagaaccttattctgctgctttctgctcctcacctcgcaccttctgctggcaactgct
gagaaggagtttgcaatccctcaagatttcatcgacagactgtcccacagcgaaatcaac
agcatcagcgacctccagcggctactggaggtaaattccccaggtcctggaaatgaggtg
atcgaggaggtcaaacagaagcaccaccagaagaaccatcactcatataaggccggttcc
tcagatctcaagagtctgcagctgtcccacagacggaagaggagtgtcgtagaggaggcg
gtacccgccatgtgcaagacacggacagtgatccacgagatcccccgcagtcaagtggat
cccaccgctgcaaacttcctaatatggcctccgtgcgtggaggtgaaacgctgtacaggc
tgctgcaacacaggcaacatgcgctgtcacccctccaaaaaacatcaccgtactgtcaag
gtggcgaaggtagagttttcatcgcgtaagaaagcgaaattgaaggaggtgcttgtccgg
ttagaggatcacctggaatgcgtgtgcacgtcacagcatcatgtgatggagcacgtggaa
gcagacgcaggcccactcacagttaaaaacggtaaaaaacggaaacacagaaagcatgca
gtggcagcacagatcaacaaggatattcaataa
DBGET
integrated database retrieval system
