KEGG   Rhinichthys klamathensis goyatoka (western speckled dace): 130069253
Entry
130069253         CDS       T09701                                 
Symbol
kdm6a
Name
(RefSeq) lysine-specific demethylase 6A isoform X1
  KO
K11447  lysine-specific demethylase 6A [EC:1.14.11.68]
Organism
rkg  Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:rkg00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:rkg03036]
    130069253 (kdm6a)
Enzymes [BR:rkg01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.68  [histone H3]-trimethyl-L-lysine27 demethylase
     130069253 (kdm6a)
Chromosome and associated proteins [BR:rkg03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    MLL3/MLL4 complex
     130069253 (kdm6a)
   Histone demethylases
    130069253 (kdm6a)
SSDB
Motif
Pfam: KDM6_C-hel JmjC KDM6_GATAL TPR_1 TPR_2 TPR_8 TPR_17 TPR_16 TPR_12 TPR_11 TPR_CcmH_CycH TPR_7 TPR_19 TPR_9 ARM_TT21_C ANAPC8 ChAPs
Other DBs
NCBI-GeneID: 130069253
NCBI-ProteinID: XP_056088995
LinkDB
Position
Unknown
AA seq 1451 aa
MKSCGVSVAAVARAAAGGGDEEKKMAAGKASETEEDFPKLTPQERERLASIDSTLFGFQR
LHEDGARTKALLLKAVRCYDVYILKAEGKVEPEVFCQLGHFNLLLEDYSKALSAYQRYYS
LQSDYWKNAAFLYGLGLVYFHYNAFQWAVQRTPSDAHSGQRRAIKAFQEVLYIDPSFSRA
KEIHLRLGLMFKVNTNYESSLKHFQLALIDSTPCTLSKAEIQFHIAHVYEIQKKYRIAKE
AYESLLQTENLPAQVKATTLQQLGWMHHTVEQLGDKANKNSYAIQCLQKSLEADPSSGQT
WYFLGRCYSSIGKVQDAFISYRQSIDKSEASADTWCSIGVLYQQQNQPMDALQAYICAVQ
LDHSHAAAWMDLGTLYESCNQPQDAIKCYINATCSKSCSNIPALTARIKCLQAQLCNLQQ
GSLPSKSKMLPSIEEAWSLPIPAELTSRQGALNTTQQQTTCNAHQSNEAQSQIPGQSLPS
HMLSDQTDDQSSPAKRKRIASPARSSPDSWANDPGHQVPNWSLTPQKLQLLEQLRTNRAN
LKPVQLQMLEQLEKQLSLMQQNQQMRLNAMGQIRPNVSNGPVADSSLPMKSNSTSSPHHP
HIPLCRTPCAHSQCAAQPIANGPVLASPTPCSTAGTLGNTDAVSVGNNHLPGLRSNGNVP
YLRQNALPHNCTTPTSSSMDDEPWKSQHINSTQGLQKSPGSHSAGPNSEQPFSSAGTSQP
TPAAGTGVPNQVGRLATASDTLAQEASHNHLPSPSSPHSATSGGQQGMVHTKESKPSGNG
HSAGTPNSTATAEGLPNHVHQGQADAAGAKPCSPGVLSSDNPQLSALLIGKANDSNNSNG
GGLAAPSTKVNNVHPSLHPGLKAQENSVASSPCSAMSTATPSPKSADHHSAQNSVNSLNS
PTLNGKGLENSQSPLKVASPLVCRKPTPPSFAPWSSVSIYPSSSDVLKACRNLGKNGVSN
NSILLDKCPPPRLPPPPFPPLPKDKLNPPTPSIYLENKRDAFFPPLHQFCTNAANPVTVI
RGLAGALKLDLGLFSTKTLVEANPEHLVEVRTQLSQPTDENWDVTGSRKMWRCESSRSHT
TIARYAQYQASSFQESLREENEKKGQKDHSDTESAPSENVLRRRRGSFKHIKFGTNIDLS
DEKKWKLQLAELSKLPAFARVVSAGNLLSHVGHTILGMNTVQLYMKVPGSRTPGHQENNN
FCSVNVNIGPGDCEWFAVPEPYWGVMNDFCEKNNINYLMGSWWPNLEDLYEANVPVYRFI
QRPGDLVWLNTGTVHWVQAIGWCNNIAWNVGPLTVHQYKSAVERYEWNKLQSVKSIVPMI
HLSWNMARNIKVSDHKLFEMIKYCLLRTLKQCQMLKEALIAAGKELVWHGRTKDEPAHYC
SICEVEVFDMLFVTSESNSRKTYVVHCQGCARRCSPNHENFVVLEQYKIEDLMQVYDQFT
LAPPLPSSSSS
NT seq 4356 nt   +upstreamnt  +downstreamnt
atgaaatcgtgcggagtgtctgtggccgctgtagctcgcgctgctgctggtggtggtgat
gaggaaaagaaaatggcggcgggaaaagcgagtgaaaccgaggaggactttccgaagctt
acgccgcaagaaagggagcgcttagccagcatagacagcacactgtttggatttcagagg
cttcatgaagatggcgccagaacgaaggccttgctgttaaaggctgttcgctgctatgac
gtctacatcttaaaagctgaagggaaagtggagccagaggtgttttgccagttaggacac
ttcaaccttttactggaagattattctaaagcattatctgcataccagagatactacagt
ttacagtcagactactggaagaatgctgcctttttatatggccttggtttggtttacttc
cattacaatgcttttcagtgggcagtgcagcgcaccccctcagatgcccattctggacag
agaagggcaataaaggcatttcaggaggtgctttacattgaccccagcttctcaagagcc
aaggagatccatctacgactcggcctgatgtttaaagtcaacacaaattatgagtcaagc
ctcaagcattttcagctggcattgattgactccacaccctgcactttgtccaaagctgaa
attcagttccacatcgctcatgtatatgaaattcagaagaagtaccgcatcgcaaaggaa
gcttacgagagtctgttacaaacagagaatctccctgcacaggtgaaggcaactacgctc
caacaattaggctggatgcatcacacagtcgaacagttgggagataaagccaacaaaaac
agctatgctattcagtgtctgcagaagtccctagaagcagaccccagttcgggacagact
tggtacttcctgggcaggtgctactcaagtattgggaaggtccaagatgccttcatatct
taccgacagtctattgataagtctgaggccagtgcagatacatggtgctcaattggtgtg
ttgtaccagcagcagaaccagccgatggatgcactgcaggcatacatctgtgcagtgcag
ctggaccacagccatgcagccgcctggatggacctgggcacgctgtacgagtcctgcaac
cagccgcaggatgccataaagtgctacatcaatgccacatgcagcaagtcctgcagtaac
atcccagctttaaccgctcgcattaaatgcctccaggctcagttgtgtaatcttcagcaa
ggtagtttaccaagtaaaagtaaaatgctccctagtattgaggaggcgtggagcctacca
atcccagcagagctcacctccagacagggagcgctcaacacaacacaacagcagaccacc
tgcaatgctcatcagagcaatgaagcacagtcccaaatcccaggccagtctcttccttct
catatgctctctgaccagacagacgaccagtccagcccggccaaaaggaagaggattgct
agtccagccaggagttcaccagattcctgggcaaatgatccaggtcatcaagtccccaac
tggagtttaaccccacagaaacttcagcttctggaacagttacggaccaacagggccaat
ctgaagccagtgcagctgcaaatgttggaacagttggaaaagcagctcagtctaatgcaa
cagaatcagcagatgaggctgaatgctatgggtcagatacgacccaatgtgtccaacggt
cctgtagcggactcctcactgcctatgaaatctaattccacatcatcccctcaccatcca
cacatccctctttgtcgcacaccctgtgcccactcacaatgcgctgctcagccaatagcc
aacggacctgtccttgcaagccccaccccatgcagcacggcgggaaccctgggtaacaca
gatgccgtctctgtgggcaataatcacctcccaggattgaggagcaacggaaatgtgcct
tacttgcggcaaaacgcactacctcataactgcacaacccccaccagcagcagcatggat
gatgaaccgtggaaaagccaacacatcaactccactcaggggcttcagaaaagtccaggt
tcacattcagcaggtcctaacagtgagcagcctttctcttctgctgggacttcccagcct
accccggcagccggcactggcgttccaaatcaggtcggacgtttggccacagccagcgac
acgttagcgcaggaggccagtcacaatcacctcccctcgcctagctcccctcactctgct
acctcaggtggacagcaaggcatggtgcacaccaaagagagcaagccttcaggaaacggg
cattccgcagggacgcctaacagcactgccactgcagaaggactgcctaatcacgtccat
cagggccaggcagacgctgctggggcgaaaccctgctcaccaggtgtacttagttcagac
aatcctcaactctctgccttgttgattggaaaagccaatgatagtaataatagtaatggc
ggtgggttggcggctcccagcacaaaggttaacaacgttcacccgagtctgcacccaggg
cttaaggcgcaggaaaactcggtggcctcctctccgtgttctgccatgtccacggccaca
ccctcacccaaatcggcagaccatcacagcgctcagaacagtgttaacagccttaacagt
cccacgctcaacggcaaaggtctggagaactctcagagccccttgaaggtggcatctccg
ctggtttgtaggaaaccgacgcctccctcgttcgccccgtggtcctctgtctccatctac
cccagctccagtgatgtgctcaaagcatgcagaaacctggggaagaatggtgtgtccaat
aacagcatcttactggacaagtgtccccctccgcggttaccacctccacctttccctcct
ctgccaaaggacaagctcaatcctcccacccctagtatttatttggagaacaagagggac
gctttctttccgccgctacaccagttctgcacaaacgctgccaaccccgttacagtgatc
cgtggcctggcgggagcactcaagctagacctaggattgttctccaccaagactctggtg
gaggccaacccagagcacctggtggaggtgaggactcagttatctcagcccactgatgag
aattgggacgtgacgggcagcaggaagatgtggcgttgtgagagcagccggtctcacacc
accattgccagatacgctcagtaccaggcctcgtctttccaggaatcgttgcgggaggaa
aatgaaaagaaaggccagaaagaccactcagacacagaatctgctccgtcagaaaatgtg
ttgcggagaagaagaggttcctttaagcacatcaaatttgggacaaacattgacttgtca
gatgagaaaaagtggaagctgcagctggctgagttgagtaagctgcctgcctttgcgcgg
gtggtgtctgcagggaatctgctcagtcatgtgggccataccattctcggcatgaacacc
gtacagctctatatgaaggtcccaggcagcaggacaccaggtcatcaagaaaataacaac
ttctgctctgtcaacgttaatattggccctggagattgtgaatggtttgctgttcctgag
ccgtactggggtgtcatgaatgatttctgtgaaaagaataatattaattacctgatgggc
tcatggtggccaaatctagaggacttgtatgaggccaatgttccagtgtatcgctttatc
cagcgaccaggtgatctggtctggctcaatacaggcactgtgcattgggttcaggctatt
ggctggtgcaacaacattgcctggaatgtaggaccactcactgtgcatcagtataagtca
gctgtggaacgctacgagtggaacaaactccagagtgtcaaatccatcgttcctatgatt
cacctctcttggaacatggccaggaacatcaaagtgtcagaccacaagctctttgagatg
atcaagtactgtttgttgaggacactaaagcagtgtcagatgctgaaggaggctcttata
gctgctggcaaagagctagtttggcatggaaggaccaaggacgaacctgctcactactgt
agcatctgtgaggtggaggtctttgatatgctgtttgtcaccagtgagagcaactcacgg
aagacgtatgtggtgcactgccagggctgcgctcggagatgcagccctaaccatgagaac
tttgtggttttagagcagtacaaaatagaggacctcatgcaagtgtatgaccagttcaca
ttagccccaccccttccctcctcctcctcgtcttga

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