Rhinichthys klamathensis goyatoka (western speckled dace): 130069886
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Entry
130069886 CDS
T09701
Symbol
traf3
Name
(RefSeq) TNF receptor-associated factor 3 isoform X1
KO
K03174
TNF receptor-associated factor 3
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg04620
Toll-like receptor signaling pathway
rkg04621
NOD-like receptor signaling pathway
rkg04622
RIG-I-like receptor signaling pathway
rkg05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
130069886 (traf3)
04621 NOD-like receptor signaling pathway
130069886 (traf3)
04622 RIG-I-like receptor signaling pathway
130069886 (traf3)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
130069886 (traf3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-TRAF
TRAF3_RING
Rod_CreS
zf-C3HC4
PEA2_C
zf-C3HC4_2
ATG16
RING_XB3-XBAT31
EzrA
CENP-K
NOCA1_mid
zf-RING_4
Sina_ZnF
YonD_C
BLOC1_2
ODF2_C
AAA_13
CCDC18_1st
zf-TRAF_2
Motif
Other DBs
NCBI-GeneID:
130069886
NCBI-ProteinID:
XP_056090020
LinkDB
All DBs
Position
Unknown
AA seq
573 aa
AA seq
DB search
MSAGRNVEQQIALQQRPPSLAMPSMAQRPRSEPGFLPLHGGFRDRFVMTPEPKYCCEACR
LVLCIPRQTECGHRFCESCITDLLSKPNPVCPADLEPLFEDKIFRDVCCNREIMALKVYC
RSEKNGCKEQISLQRVMDHLEVCPYYEVPCPLGKCKEKMLRKDMPEHLSRKCKHREITCE
FCNHKMALTELQKHKETVCPAFPVACPNHCSFSSILRSELSSHQHDCPKAQVTCSFIRYG
CTYKGLNQEMREHESSFASEHLRMMTVRNTTLEAKVEDIKSELMERYKVLPSLSSRLAEV
ETQYEEMREKNRQLEQKLVSMQMLMSAHSEKLLEVEMELRELRPLRAMRDEVEALRGSVE
SMRSVVSSLDSGRVGSSSGSHTLGSLEQQLSRHDDMMSVHDIRLAEMDLKLQVLETASFN
GTLIWKIRDYKRRKQEAVASKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFF
VVMRGEYDALLPWPFKQKVTLMLMDQGPARKHLGDAFKPDPSSSSFRRPTGEMNIASGCP
LFVAQTVLENGTYIKDDTIFIKVTVDTSDLPDP
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcagggcgtaatgtggaacagcagattgccctgcagcagcgtccgccatctctt
gctatgccctccatggcccagcggcccaggtccgagccgggcttcttgcccctgcatgga
ggcttcagggaccgttttgtcatgacacctgagcccaagtattgctgtgaggcctgcagg
ctagtgctctgtatacctcggcaaactgagtgcggacatcgcttctgcgagagctgcatc
acagacctgctcagtaagcctaacccagtgtgtccagctgatctagaaccactctttgaa
gataagatattccgggatgtttgctgcaatagggaaattatggctctgaaggtctactgc
cgaagtgagaaaaatggatgcaaagaacaaataagtttacagcgggtcatggaccacttg
gaagtttgtccgtactatgaggtgccgtgccccttgggaaaatgtaaggagaagatgctg
aggaaagacatgcccgagcatttgagccgcaaatgcaaacacagagagatcacctgtgaa
ttctgcaatcacaagatggccctcactgagttacagaaacacaaagaaacagtctgtcct
gcatttcctgtagcatgccctaatcactgctcgttttcttccattctaagaagcgagctg
tccagtcaccagcatgactgtccaaaggcccaggtgacctgctccttcattcgctacggt
tgcacctataaggggctgaatcaagagatgagagaacatgagtccagttttgcatctgag
cacctgagaatgatgacagtcaggaacaccacactagaggccaaggtcgaggacattaag
agcgagctgatggagcgctataaagttctgcccagcctcagcagtcgtcttgcggaggta
gaaacgcagtatgaggagatgagagaaaagaacaggcagctggagcagaagctagtcagc
atgcagatgttgatgagcgctcactcagagaaactgcttgaggttgagatggagctgcgg
gagcttcgtccactgcgggctatgagggatgaggtggaggctctgagagggtctgtggag
agcatgcgttcagttgtatcttctctcgattcgggtcgtgttggctccagttctggttct
cacaccctgggctccttagagcagcagctttcacgtcacgatgacatgatgagtgtccat
gacatccggttggcggagatggacctgaagctgcaggtgctagagacggccagcttcaat
ggtaccctcatttggaagatccgtgactacaaaaggcggaaacaggaagccgtggcctcc
aaaaccctctcgctctacagccagcccttctacacgggctatttcggctacaagatgtgt
gcccgcgtttatctcaatggggatggaatgggtaaaggcacacatctctcgctcttcttc
gtggtcatgcgcggggaatatgacgccttgctgccttggccatttaaacagaaagtaaca
ttaatgctaatggaccaggggccggcacggaaacacttaggtgatgccttcaaaccggac
cccagtagcagtagctttcgccggcccactggtgaaatgaacatcgcctcaggctgtccg
ctcttcgtggctcagactgtcctggagaacggaacctacatcaaagacgataccatcttc
atcaaagtgactgtagacacctctgacctcccggacccttga
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integrated database retrieval system
