Rhinichthys klamathensis goyatoka (western speckled dace): 130070278
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Entry
130070278 CDS
T09701
Symbol
scn4ab
Name
(RefSeq) sodium channel protein type 4 subunit alpha B
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rkg04040
]
130070278 (scn4ab)
Ion channels [BR:
rkg04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
130070278 (scn4ab)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
PilO_N
ResIII
Motif
Other DBs
NCBI-GeneID:
130070278
NCBI-ProteinID:
XP_056090591
LinkDB
All DBs
Position
Unknown
AA seq
1831 aa
AA seq
DB search
MNKRKINLSEIWRRNRAPHPIRAKLKLWPHQLEQLRDPEVVAALLQQNVKMARLLPHAGI
DVFRPFTLESLAEIERRMAEEAAEQEHMKAQNIEVAEENLPKPSSDLEAGKSLPFIYGDP
PPKLLNVPVEELDPFYKAQKTFIVVTKGKTIFRFNAEPACYILSPFNPIRRVAIRILIHS
LFSLFIMLTILSNCAFMTMSDPPSWSKTVEYVFTGIYTFEALVKVLSRGFCKGHFTFLRD
PWNWLDFMVISMAYVTEFVDLGNVSALRTFRVLRALKTITVIPGLKTIVGALIQSVKKLA
DVMILTVFCLSVFALIGLQLFMGNLRQKCVKWPPLGWSYSDNLTMLFNHTDVNGTEADYS
FYNYEEYIEREENHYYVPGHMDPLLCGNSSDAGKCPEGFVCLKAGRNPNYGYTSYDTFAW
AFLSLFRLMTQDFWENLFQLTLRAAGKTYMIFFVVIIFLGSFYLINLILAVVAMAYAEQN
EATFAEAKEKEEEYAKILEQLKKQAEQKNGVVNGSKTSLSSKNKGDDDQIQSDYDGIALK
PLSKSYGSKGSMNYLEVPDSQMRKMSAVNATDNALDELEDNQRACPPCWYKFADIFLKWN
CCLPWVKFKKIVYLFVMDPFVDLGITICIVLNTMFMAMEHYPMTESFEHTLSVGNLVFTG
IFAAEMVLKLIALDPYHYFQVGWNIFDSIIVTMSLVELFLADVEGLSVLRSFRLMRVFKL
AKSWPTLNMLIRIIGDSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYRDCVCKISEDCVL
PRWHMTDFFHSFLIIFRILCGEWIETMWDCMEVADQGMCIVVFMMVMVIGNLVVLNLFLA
LLLSSFSGDNLAASDDDGEMNNLQIAISRITRGIDWVKAFVIGHTRQLLGLMPKEEGANA
NKEGDSKMATMNSSLSVIKVPIANGESDYEDGNSSSEDEDKEGVDKKKYGDESSTCSTVD
KPPEVEELEVVEEEDSTFPEDCYTENCIRRCPILELDVTQGKGKAWWNLRKACYAIVEHS
YFETFIIFMILLSSGALAFEDIYIEQRRMIKIILEYADQVFTYVFVIEMLLKWVAYGFKV
YFTNAWCWLDFLIVDVSLISFTANILGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN
ALVGAIPSIFNVLLVCLIFWLIFSIMGVNLFAGKFYYCFNETSESIIHPSVVNNKTDCFM
LMENGSDVRWKNLKVTFDNVGMGYLSLLQVATFKGWMDIMYSAVDSRNVEDQPEYESNLY
MYIYFVIFIIFGSFFTLNLFIGVIIDNFNQQKAKIRGTDIFMTEEQKKYYNAMKKLGSKK
PQKPIPRPTNCFQGLVFDLVTKQFFDIFIMVMICLNMVTMMVETDDQSLEMENILFLINF
IFIVLFTGECTLKIIALRYHYFSVGWNIFDFVVVILSISGLLLADLIEKYFVSPTLFRVI
RLARIGRVLRLIRGAKGIRTLLFALMMSLPALFNIGLLLFLIMFIFSIFGMSNFAYVKKE
AGIDDMFNFETFGNSIICLFMITTSAGWDGLLSPILNSPPNCDPYVENPGSPIRGNCGSP
AVGIVFFCSYIVMSFLVVVNMYIAIILENFNVATEESGDPLCEDDFEMFYETWEKFDPSA
SQFIDYSRLSEFCDTLKDPLRIPKPNTLKLITMDLPMVPGDKIHCLDILLALTTEVLGDS
GQMDAMKGTMEEKFMANNPSKVSYEPITSTLRRKQEEVAASTIQKAYRSHILKRCLKHAS
YMYREKTDSKRLEEEAPENEGMIANKIRYLYGDQAIEDNNPVGFSFSRHGETQHGAKRPP
VKVQSDVVLHSAPFPVPDSSRAAENLKESIV
NT seq
5496 nt
NT seq
+upstream
nt +downstream
nt
atgaataagcgaaagataaacctgtcggagatttggcgtaggaaccgtgctcctcaccca
atcagagctaagctaaaactatggcctcatcaactggaacaattgagagaccccgaagtg
gtggcagccctccttcagcagaatgtcaagatggcacgcctactccctcacgctggcatc
gatgtgttccgccccttcactttggagtcgctcgccgagatcgagcggcggatggcagaa
gaagccgccgagcaggaacacatgaaggcccagaatatcgaggtggctgaagaaaatctg
cccaaacccagcagtgatttggaagcaggaaagtcccttccgttcatctacggagaccct
ccaccaaagctcctcaatgttcctgttgaagagttggatccattctacaaagcacaaaaa
actttcatcgtggtcaccaaagggaaaacaatattcagattcaatgctgaacctgcctgc
tacattctaagtcccttcaaccccatccgacgagtagccataagaatactcatacattca
ttgtttagcttgttcatcatgttaaccatcttgtccaactgtgctttcatgacaatgagt
gaccctccatcctggagcaaaacagtagagtacgttttcactggcatctatacctttgag
gcattggtaaaggtgctgtccagaggcttctgcaagggtcatttcacattcctacgagac
ccgtggaattggctggatttcatggtcatcagcatggcgtacgtcacagagtttgtggac
ttggggaatgtatccgctctgaggactttccgtgttctccgcgccctgaaaacaattact
gtaattccaggtctaaaaaccattgttggcgccctgattcagtctgtgaagaaactggcg
gatgtcatgatcctcaccgtcttctgtctcagcgtgtttgctctcattggcctgcaactg
ttcatgggaaatttgcggcaaaaatgtgtcaaatggcctccacttggctggagctacagt
gacaacctgaccatgctcttcaatcacacagacgtcaatggcactgaagctgactacagc
ttttacaactacgaggaatatattgaaagagaagaaaaccactactatgtacctggccat
atggatcctttactctgtgggaacagctctgatgcagggaagtgccctgaggggttcgta
tgcctgaaagctggccgaaacccaaattatggctacactagttatgacacctttgcctgg
gctttcttatcccttttccggctaatgactcaagacttctgggagaacttgttccagttg
acgctccgtgcagcagggaagacgtatatgatcttctttgtagtcatcatcttcttgggt
tcgttctacctcatcaatctgattctggctgtggtggccatggcgtatgctgaacagaat
gaagccacctttgcagaagctaaagaaaaggaggaagagtatgcaaaaatcctggagcag
ctcaagaaacaagctgagcagaagaacggggtggtaaatggcagcaagacatcactatcc
agcaaaaataaaggtgacgatgaccaaattcagagcgactatgatgggatcgcactgaaa
cccctttcgaaatcatatggatccaaaggcagcatgaattacttagaagtccctgactct
cagatgagaaaaatgagtgcagtgaatgctacagacaatgctttagatgagctggaagat
aatcaaagggcttgtcctccctgctggtacaagtttgctgacatattcctgaaatggaat
tgctgccttccatgggtgaaatttaagaagatcgtctacctatttgtaatggaccctttt
gtggatctgggcatcaccatctgcatcgtgctcaacacaatgttcatggctatggagcac
tatcccatgactgagagttttgaacacacattgtcggtgggaaacctggttttcacaggt
atcttcgcagcagagatggtgctaaaacttattgcactggacccttatcattactttcag
gttggctggaacatttttgacagcataattgtgaccatgagcctggtggagttgttctta
gccgatgttgagggcttgtctgtgctaaggtccttccgtctgatgcgtgtgttcaagctg
gcaaagtcttggccaaccctaaacatgctgataaggatcatcggtgattctgtgggtgct
cttggaaacctgacccttgtcctggccattattgtcttcatctttgctgtggtggggatg
cagctttttggaaagagctacagggactgtgtgtgtaagatctcagaggattgtgtgctc
cctcgctggcacatgacagatttctttcactcattcctcatcatctttcgtattttatgt
ggggaatggatcgaaacaatgtgggactgcatggaggtggctgaccaaggcatgtgcatc
gtcgtcttcatgatggtcatggttataggaaacctagtggtgttgaatctcttcctggct
ctgctgctcagttccttcagcggggacaacctggcagcgtctgatgacgatggggagatg
aacaatctgcagattgccatttctagaataacaagaggcattgactgggtaaaggccttc
gttatcggacatacaagacagcttctgggcctgatgccaaaggaagagggtgcgaacgca
aacaaagagggagattctaaaatggccaccatgaattccagtctgtccgttatcaaagtg
cctatagccaatggtgaatcggattatgaggatggcaacagctcttctgaggatgaagac
aaagaaggcgtcgataaaaagaaatatggagatgaatcatcaacctgcagcacagtggac
aaacctcctgaggtagaagagttagaggtggtggaagaagaggattccaccttccctgag
gactgctacacagagaactgcatcaggcgatgtcctatcttggagcttgacgttacccag
ggtaaagggaaggcatggtggaacttacgtaaagcctgctacgccattgtggagcacagc
tattttgaaaccttcatcatcttcatgattctcctcagcagtggagctttggcatttgag
gacatatacattgaacaacggagaatgattaaaatcatccttgaatatgcagatcaggtc
ttcacctatgtgtttgtcattgagatgcttctgaaatgggtagcctatggtttcaaggtc
tatttcacaaacgcatggtgttggctggactttctcatcgttgatgtgtccctgatcagc
ttcactgcaaatatcttaggctactctgaactgggggccattaagtctctcaggactctg
agagcgctaagacctcttcgagctctctccagatttgaaggaatgagggtggtggtgaat
gccctggtgggggccatcccctccatcttcaacgttctcctggtgtgcctaatcttttgg
ctcatcttcagcatcatgggcgtcaacctttttgctggaaagttctactactgcttcaac
gaaacatccgagtcaattatccatcccagtgtggtcaacaataagactgattgctttatg
ctcatggaaaatggatcagatgtgcgatggaagaatttgaaggtcacctttgataacgta
ggcatgggctacctctccttactgcaagtggcaacatttaaaggatggatggacatcatg
tatagtgctgtggattcccgtaacgtggaggatcagccagaatatgagtcaaatctctac
atgtacatttactttgtgatcttcatcatttttggctctttcttcacccttaatctattc
attggtgtcatcattgacaatttcaaccaacaaaaggcaaagataagaggaacagacatc
ttcatgacagaagagcagaaaaaatactacaatgccatgaagaaacttggctccaaaaag
ccacagaaaccgattccaaggcctacgaactgcttccaaggcttggtattcgacctggtc
accaagcaattctttgacatcttcattatggtgatgatctgcctgaacatggtgaccatg
atggtggagacggatgaccagagtttggagatggaaaatatcctgttcttgatcaacttt
atcttcatcgtgctcttcaccggggagtgcactctcaagatcatcgccctgcgctatcac
tacttctccgttgggtggaacatttttgattttgtggtggtcattctttcaatctcgggt
cttttgctggcagacctcatcgagaagtactttgtgtcacctacgctgttccgagtcatc
cgactggccagaattggccgtgtcctgcgtctcatccggggtgcgaaaggaatcaggacg
ttactgtttgcgctgatgatgtcgctacctgccctcttcaacattggcctccttctattc
ttaatcatgttcattttctccatattcggcatgtccaactttgcgtacgtgaaaaaagaa
gcaggcatcgatgacatgtttaatttcgagaccttcgggaacagtatcatatgcttgttc
atgatcacgacgtccgccggctgggatggactgttgtctcctattctcaacagcccacca
aactgtgacccatatgtggagaacccgggatcgcctatccgaggaaactgtgggagcccc
gcggtgggcatcgtcttcttctgcagctacattgtcatgtcgttcctcgtcgtggtcaac
atgtacatagccattatcctggaaaacttcaacgtagcgacggaagaaagtggcgacccc
ttgtgcgaggacgacttcgagatgttctatgaaacctgggagaaatttgacccctctgct
tctcagttcatcgattacagtagactgtctgaattctgcgacacgctgaaagaccccttg
agaatcccgaaaccaaacacattgaagttgatcacaatggaccttcccatggtccctggt
gataagatccactgtctggacatcctcctggccctcactacagaggtgctgggcgattct
ggacagatggatgccatgaaaggaactatggaggagaagttcatggcgaacaacccctca
aaggtttcgtacgagcccatcaccagcactctcagacgtaagcaagaagaagtggctgct
tcgaccatccaaaaagcctaccgctcacacatcctcaaacgctgcctcaaacacgcctcg
tatatgtacagagagaagacagactcgaagagactagaagaagaggctccggagaacgaa
gggatgatcgctaacaaaattaggtatctttatggagatcaagccattgaggacaacaat
cctgtgggtttctctttctctcgacatggggaaacacagcacggggctaagcgtcccccg
gtgaaggttcagagcgatgtggtcttgcactccgccccttttcccgttcctgactcctca
agggctgcggaaaacttgaaggagtcaattgtgtag
DBGET
integrated database retrieval system
