KEGG   Rhinichthys klamathensis goyatoka (western speckled dace): 130070608
Entry
130070608         CDS       T09701                                 
Symbol
smndc1
Name
(RefSeq) survival of motor neuron-related-splicing factor 30
  KO
K12839  survival of motor neuron-related-splicing factor 30
Organism
rkg  Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:rkg00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    130070608 (smndc1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:rkg03041]
    130070608 (smndc1)
Spliceosome [BR:rkg03041]
 Complex A
  U2 snRNP components
   U2 related factors
    130070608 (smndc1)
 Complex B
    130070608 (smndc1)
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    130070608 (smndc1)
SSDB
Motif
Pfam: SMN_Tudor TUDOR DUF2730 DUF2067 DUF7671 DUF7902
Other DBs
NCBI-GeneID: 130070608
NCBI-ProteinID: XP_056091014
LinkDB
Position
Unknown
AA seq 237 aa
MSEELVKQLSNYKAQLQQVEAALSTDPDNEDLRKLQKDLQEVIELTKDLLTSQPVEGTTS
TKSSETVAPTHSWRVGDHCMATWSQDGQLYEAEIEEIDSENGTAAITFAGYGNAEVLPLH
VLKEVEEGRSREEKDGKPKSKKELLAEQREYKKKKAQKKVLRMKELEQEREVQKSKWQQF
NNKAYSKNKKGQVKRSIFASPESVNGKVGVGTCGIADKPMTQYNDTSKYNVRHLMPQ
NT seq 714 nt   +upstreamnt  +downstreamnt
atgtctgaagagttggtaaagcagttgagcaattataaagctcagctgcagcaggtggag
gcggcactctctacagatccagacaatgaagatctgcgtaaactgcagaaggatctccag
gaggtgattgagttgactaaagacctgttgacatcacagcctgtggagggtacgaccagt
acaaaaagctcagagacagtcgctcccactcacagctggagggtcggagaccattgcatg
gccacctggagccaggacggacagttgtatgaggcggaaattgaagagattgacagcgag
aatggcacggcagccatcaccttcgctggctacggcaacgcagaggtgttgccacttcat
gtgctcaaagaagtggaggagggcaggagcagggaagagaaggacggaaagcccaaatcc
aagaaagagctgctggcagaacagagggaatataagaagaaaaaagcccagaagaaggtg
ctgcgcatgaaggagctggagcaagagagagaagttcagaagtccaagtggcagcagttt
aacaataaagcctattcaaaaaataagaaaggacaggtgaagaggagtatatttgcatct
ccagagagtgtgaatggaaaggttggcgtcggcacgtgtggtatcgcagataaacccatg
acccagtacaatgacacttcaaagtataatgtcaggcacctaatgccccagtga

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