Rhinichthys klamathensis goyatoka (western speckled dace): 130070616
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Entry
130070616 CDS
T09701
Symbol
bcl11ba
Name
(RefSeq) BAF chromatin remodeling complex subunit BCL11B a isoform X1
KO
K22046
B-cell lymphoma/leukemia 11B
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rkg03000
]
130070616 (bcl11ba)
Transcription factors [BR:
rkg03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
130070616 (bcl11ba)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
zf-H2C2_2
zf-C2H2_16
zf-C2H2_15
zf-H2C2_5
Actin_micro
DUF3268
Zn_SUZ12
Motif
Other DBs
NCBI-GeneID:
130070616
NCBI-ProteinID:
XP_056091023
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All DBs
Position
Unknown
AA seq
812 aa
AA seq
DB search
MSRRKQGNPQHLSQREIITPEAEHVDAGLAVADLHSHPLLDPSMPGTLPPGLGDHDLLTC
GQCQLTFPLGDILLFIEHKKKQCQGLTAGHGCYDKMADRNSPSPPRAELRKVVEPVEIGI
QVTPEEEDERLLTPPKGICPKLESGLAGRDEPSSYICTTCKQPFTNAWFLLQHAQNTHGI
RIYLETNSSNTSLTPRITIPPPIGAESIPQSPLTNFLGDNNPFHLLRMAGPLLREPPPGF
VENRLPNTPPFVSPPPRHHLDPHRLERLSAEEMGLISQHPSAFERVMRMTPMAMESQSMD
FSRRLRELAGNNNSTPPLSPSRANPMHRLLNPNPFQPSPKSPFLSTPPLPPMPPNSTTPP
QTQGKSKSCEFCGKTFKFQSNLVVHRRSHTGEKPYKCQLCDHACSQASKLKRHMKTHMHK
SGSMTGRSDDGLSTTSSPEPGTSDVTGEGMKNRDGDFRGEGMGPDNEEEEEEEEEEELEN
ESRPESNFSMDSEFCRNRENGTKPPSDEKNLSLGKMVENVGLSSIQQYNNLIVNNRKRFP
FSKRVSEGQRDVGDDDSVVGEMDQVERATVNGRNCGSGDSFSGLFPRKPTPITSPSLSNS
SNKRIKIEKDLDIPPAPLIPSENVYSQWLVGYAASHHFIKDPFLGFTDSRQSPFATSSEH
SSENGSLRFSTPPGDLLDGGLSGRSGTASGGSTPHLGGGAGPGRPSSKESRRSDTCEYCG
KVFKNCSNLTVHRRSHTGERPYKCELCNYACAQSSKLTRHMKTHGQLGKEVYRCDICQMP
FSVYSTLEKHMKKWHGEHLMTNEVKIEQAERS
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgtcgcaagcagggaaaccctcagcatttgtcgcaaagagaaattataacaccg
gaagctgagcatgtggatgcgggactggccgtggctgatctccactctcacccgctgctg
gatcccagcatgcctgggactctgcctccgggcttgggcgaccacgacctcctcacctgt
ggccagtgccaactaaccttcccactgggggacattctgctcttcatcgagcacaagaaa
aagcaatgccagggtctaacggctggccacggctgctacgacaagatggcagaccgcaat
agcccctcaccgccccgcgccgagctgagaaaagtggtggaaccggtcgaaattggaatc
caggtgacacctgaagaggaggacgagagactgttgacacccccaaaaggaatttgcccc
aagctagaaagtggcctggcaggtagagatgaaccttcgagttacatatgcacgacgtgc
aaacagccctttaccaacgcctggttccttctgcagcatgctcagaacacgcatgggatc
cgcatctacttggagaccaactcctcgaatacctccctgaccccacggatcactattcct
ccccccattggtgctgaatccataccacagtccccattaaccaactttttgggggacaac
aaccccttccacctcctacggatggctgggcccctactccgagagcccccaccaggattt
gtggaaaaccgcctccccaatacgcctccctttgtcagcccccctccacgccatcactta
gatccccatcgcctggaacgccttagtgcagaggaaatgggtttaatctcccagcatccc
agtgcctttgagagagtgatgcgcatgacacccatggccatggagtcccagtccatggat
ttctcccgccgacttagagagcttgctggaaacaacaactccactccaccgctgtcacca
agccgtgctaaccctatgcatcgcctccttaatcccaaccccttccagccgagtccgaag
tcgccctttctgagcacccctccgctgcctcccatgccccctaacagcaccaccccgcca
cagacacagggaaagtcgaaatcctgcgagttctgcggcaagaccttcaagtttcagagt
aatctggttgttcatcggcgaagccacacgggcgagaaaccctacaagtgccaattgtgt
gaccatgcctgttctcaggctagcaaactgaaacgccacatgaagacccacatgcacaag
tctggctccatgacagggcgctctgacgatggcctgtccaccaccagctcacccgagcca
ggcactagtgacgtaaccggggagggtatgaagaacagggatggcgatttcagaggtgag
ggcatgggccctgacaacgaagaggaggaggaagaggaagaggaggaggagttggaaaat
gagagcaggcctgagtcaaacttcagtatggattctgagttctgtcggaacagggagaat
ggcacaaagccaccttcggatgagaagaacctctccttggggaagatggtggaaaacgta
gggctcagctccatccagcagtacaataacttaatagtcaacaatcggaaaaggtttccg
ttctccaaaagggtctcagaggggcagagggatgtgggcgatgatgattcagtagtgggg
gaaatggaccaagtggaacgggcaactgtaaacggaaggaactgtggctcgggtgactct
ttctcaggcctgtttccccgcaagcccactcccatcaccagtcctagcctttccaactcc
tctaacaagaggatcaaaatcgaaaaggatttggacatacccccagcccccctaatccca
tctgaaaacgtctactcccagtggctagtgggctatgcagcatcccaccacttcatcaaa
gatccctttcttggcttcaccgattccagacaatctccattcgccacctcctcggagcac
tcctctgagaacggcagtttgcgattctccacgccgccaggggacctgctggacgggggc
ctctccggccgcagtggtaccgctagcggaggcagcaccccacacttgggtgggggcgcg
ggaccgggccggcccagctcgaaagagagccggaggagtgacacctgtgagtactgtggg
aaggtgttcaagaactgtagcaatctgacagtgcacagacgcagccacacaggcgagagg
ccctacaagtgtgagctttgcaactacgcctgtgcccagagcagcaagctcacccgccac
atgaagacacacggccagctcggtaaggaagtgtaccgctgtgacatttgccaaatgccc
ttcagcgtctacagcacgctcgagaaacacatgaaaaagtggcatggggaacatttgatg
acaaatgaggtcaaaattgaacaagcagagagaagctaa
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integrated database retrieval system
