Rhinichthys klamathensis goyatoka (western speckled dace): 130070813
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Entry
130070813 CDS
T09701
Symbol
setdb1a
Name
(RefSeq) histone-lysine N-methyltransferase SETDB1-A
KO
K11421
[histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase [EC:
2.1.1.366
]
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg00310
Lysine degradation
rkg01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
130070813 (setdb1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rkg03036
]
130070813 (setdb1a)
Enzymes [BR:
rkg01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.366 [histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase
130070813 (setdb1a)
Chromosome and associated proteins [BR:
rkg03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
130070813 (setdb1a)
Heterochromatin formation proteins
Other heterochromatin formation proteins
130070813 (setdb1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SET
Pre-SET
Tudor_5
Tudor_4
MBD
DUF5604
Sigma54_AID
DUF7206
Motif
Other DBs
NCBI-GeneID:
130070813
NCBI-ProteinID:
XP_056091325
LinkDB
All DBs
Position
Unknown
AA seq
1551 aa
AA seq
DB search
MSSGRDENLLRMTKDDLQRWIQEEVDRNPHLMQRREQLTQVEEWVKLRERDSTYTRLLYS
NASESVLECESVMKGLYGMLGLEYQDEDSEEEGGGGPRPQDVIHITDDDEDRQRISVCNG
DDDDDDLVVIDLGATKETLEPMLEKVTMAIQKSSRLVQDLVQMVNKTSSSTAPPSSSSDI
TNRPSSTSTPENSRSESVTPKQITDNSIAIVKTESLLKVPEMSSLLSNSEKFESIAGHNS
DSRPIKTEPELTAITAYEMNISKQHETAPSQNNTSIKLIKTEPQLTAVTPSEMSLIPSKQ
PETIISANSGSIAKIKSEPQSTVVKSEMSSPPSDSKLFKMHSSHNSKSIAEMKTEPQLTA
LTPEINLLESDSEQSEGFNSDRSATIKTELKLSAMTSPEIPSLSGDSKQLKASAGHNSAS
IASNESGPQVTPVTPSEVSSPLSTTEQMDTFASDDTALIETNQTEPESTSATSPEVSPLP
MNSEEPETTPSDDTAFIETNQTEPESTTETSPEVSPLPRNSEEPENIATCDSESTDKTEK
PTTRSKSAKPSVPTTSASTNLRSKNSTSVTSTSSQQKETSAPPSPADSFEEPSDSEDPDY
LPPNSPIPSDDDYYPPESPPSKASTNKPDNTSRNDASAEPSKAAKISKPSLKDSSGSSKA
HKTPEIKLNVSAGVLGKRKPDLWCRGTVQEVQTMEKGNKYKVEFKHGKQILLSAHHVAPV
MRPVLNDLFVGCRVVASYKNDAGKTLFNGGVLVELPERKNRMRFLVFYDDGQTAYLALPD
FHVVCKQFRKVWRDIEDETCRAQVKEYMRVFPNPIAVVLRIGQDTKAVRNGKFEACTVLQ
LDGSLIQICYKKDKQKEWIYKGSDKLEHIINIKKRLSKDKPEQTIPKRTQPSPQQKTQQP
DKTAGNAVPQHNKTSSSTKVDSPTVTSTTVTSATDTPARVTRQSDTTVAKTPSISPQNIM
SAAFQPKVILQKLSRLSPILRMRTANTNHRTLYSRSAKRPAPDEEEEYVSEEEGHVSEQD
QHKSIYLYHRCCPACLDGVRPSQVDMHHGENPLLIPLLFKFRRMTARRRIDGKVFFHIFY
RSPCGRSLCDMQEVQEYLIETRCDFLFLEMFCMDPFVLVNRARPPSTSTSQPHLYLPDIS
VGREVLPVPCINEVDNTLAPNVTYTKDRIPAPGVSVNTSLDFLIGCDCTDGCRDRSKCAC
HQLTIGATSLCSGGPVDVSAGYTHKRLPTSLPTGVYECNPLCRCDPRMCSNRLVQHGLQL
RLELFMTQHKGWGIRCRDDVAKGTFVCVFTGKIVNEDKVNEDETVSGNDYLANLDFIEGV
EKVKEGYESEAYCSDTEVESNKKTITMKTGPLRKNTLYQEDTSSGEEREEPMELVTEQEE
MEVCDESLSARILSHKPHEASKDAQKKVTKQIREDGQGTSGPKRCFAIKSCKRRVKPLET
TDTQNEKTKTVLSANNTRRLFNGEETCYIIDARQEGNLGRYINHSCSPNLFVQNVFVDTH
DLRFPWVAFFASKRIRAGTELTWDYNYEVGSVEGKVLLCCCGSLRCTGRLL
NT seq
4656 nt
NT seq
+upstream
nt +downstream
nt
atgagtagcggaagagatgagaacctcctgaggatgacaaaggatgacctgcagcgctgg
atccaggaagaggtggaccgaaaccctcatctgatgcagagacgtgaacagcttacacag
gtggaggagtgggtgaagctgagggagagagactcaacctacacccgccttctgtacagc
aatgcctccgaatcagtccttgagtgtgagtcggtgatgaagggtctttatggaatgctg
ggattggagtaccaagacgaggactcggaagaggaaggaggaggaggaccacgaccacag
gacgtcattcatatcacagatgatgatgaggatagacagagaattagtgtctgtaatgga
gatgatgatgatgatgatcttgttgtcattgatctgggagccaccaaagaaaccttggaa
ccaatgcttgaaaaggtgactatggccattcagaagtcatccagactcgttcaggactta
gtccagatggtgaacaaaacctcttcaagcactgcaccaccatcatcatcatctgacatc
accaacagaccctcatcgacctcgacccccgagaacagccgttctgaatctgtcacacca
aaacaaataacggacaactcgattgcaatagttaagaccgaatctcttttgaaagtaccg
gaaatgtcctcacttctcagcaattcagaaaaattcgaatctattgccgggcataattca
gattctagaccaattaagactgaacctgaactgacagcaataacagcttatgaaatgaac
atttcaaaacaacacgaaaccgctcctagtcaaaacaatacatccataaaattaatcaag
acagaaccccaattaacagcagtgactccttcagaaatgtctttgattccaagcaaacaa
ccagaaactattatcagtgctaattctggatccattgcaaaaataaaatctgagcctcag
tcgacagtagtaaagtcagaaatgtcttcgcctcctagcgattcaaaactattcaaaatg
cattccagtcataattcaaaatccattgcagaaatgaagactgaacctcagctgacagca
ttaactcctgaaataaatttgcttgaaagcgattcggaacagtccgagggtttcaattca
gatcgcagtgcaacaattaaaactgaacttaaattatcagctatgacttctcctgaaatc
ccttcactttcaggtgattcaaaacaattgaaagctagtgccggtcataattcagcttcc
atagcatcaaatgagtctggtcctcaagtgacaccagtgaccccttcagaagtgtcttcg
cctttaagcactacagaacaaatggacacctttgccagtgatgatacagcattaattgaa
acaaaccagactgagcctgagtcgacctcagcgacttctcctgaagtgtcaccgttgccg
atgaattcagaagaacctgaaactactcccagtgatgatacagctttcattgaaacaaac
cagactgagcctgagtcgaccacagagacttctcctgaagtttcaccgttgccgaggaat
tcagaagaacctgagaatattgccacttgtgattcggaatccacggacaagacggaaaag
ccaacaacaaggagcaaatcagctaaaccttctgtgcccacgacaagtgcatcaaccaat
ctgagatcaaaaaactctacatccgtcaccagcacttccagccagcaaaaagaaacaagt
gcaccaccatcacctgcagatagttttgaggaaccgtctgactcagaggacccagattac
ctgccgcctaatagtcctatacccagtgatgatgattattatccccctgaatcccccccc
tccaaggcatcgaccaataaacctgataatacctcccgcaatgatgcttctgcggaacct
tccaaagctgcaaaaatttccaagccttcattaaaggattcctctgggtcttctaaagca
cataaaactccagagataaaactcaacgttagcgcgggagttttggggaaaaggaaaccc
gatttgtggtgtcgaggaacagtacaagaagtccaaacgatggagaagggcaacaaatat
aaggtggagtttaagcatggtaaacagattctgctgtctgctcatcatgtggcccctgta
atgcgtcctgtgctcaatgatttgtttgttggctgtcgtgttgtggcaagctacaaaaat
gatgcaggaaagaccttgtttaatggtggcgtgctggttgagcttcctgagcgcaagaat
cgcatgaggttcttagtgttttatgatgatggccagacagcgtatctggcactgccagac
tttcatgttgtctgcaaacaatttagaaaggtgtggagggatatcgaggatgagacatgt
cgggcgcaggtgaaggaatatatgcgtgtctttcccaaccccattgctgtggtgcttcgc
atagggcaagacaccaaggcggtgcgaaatggcaagtttgaggcctgcacggtgcttcag
ttggatggcagcctgatccagatctgctataagaaagacaagcaaaaagagtggatttat
aaaggctcagacaagttggaacacattataaatatcaagaaacgtctttctaaagacaaa
ccagaacaaaccattccaaagagaacacaaccatcgcctcaacagaaaactcaacaacct
gataaaaccgcaggaaatgccgtgcctcagcacaacaaaacttcctcctcgacaaaagtg
gactcaccgacagttacatcaacgactgttacctcagcaactgacactcccgcacgcgtg
acccgacaatctgataccacagtcgccaaaacaccatctatctcccctcaaaatatcatg
tcggcagctttccagccgaaggtcatcctccagaagttgtctaggctctcgcccatctta
cgtatgcgaacagcaaacaccaaccaccgcacactatattccagaagtgcaaaacgaccc
gccccggatgaggaagaagagtatgtttctgaggaagaggggcacgtctcagagcaagac
cagcacaagtccatatacttgtatcaccgctgttgtccagcatgtctggatggggtaaga
ccatctcaggtcgacatgcatcatggtgaaaatccgcttctcatcccattgctttttaag
tttcggcgaatgactgctcggaggcgcatcgatggaaaggtgtttttccacattttctat
cgttctccgtgtgggcggagcctgtgtgacatgcaggaagtgcaagaatacttgattgaa
acgcgttgtgacttcctcttcctggaaatgttctgtatggacccgtttgtgcttgtgaat
cgcgcccgacccccttccacatccaccagccagcctcacctctacctgccggacatctct
gtgggtagggaggtgttgcctgtgccctgtattaatgaagtggacaatactcttgctcct
aatgtcacttacacaaaagacagaattccagctccaggtgtttccgtcaatacaagcttg
gacttcttgatcggctgtgactgcacagatggctgtcgggacaggtcaaagtgcgcgtgc
caccagctgaccattggggccacgtccttatgcagtggcggtccagtagatgttagtgct
ggatacacacataagaggttgccaacaagcttgccaacaggggtgtacgagtgtaaccct
ctgtgccgctgtgacccgagaatgtgcagcaacaggctggttcagcacggtctgcagctg
cggctggagctcttcatgacacagcacaagggatggggcatccgctgcagagatgatgtg
gccaagggcacattcgtctgcgttttcactggtaaaatagtgaacgaagacaaagtgaat
gaagatgaaacagtgtccggcaatgactatttggccaaccttgacttcattgagggggtg
gagaaagtgaaagagggttatgagagcgaggcgtactgctcggacacagaggttgaaagc
aacaagaagaccataaccatgaaaacagggccgttgcggaaaaatactctctaccaagaa
gacactagcagtggtgaagaaagagaagaacctatggagctggtcacagaacaagaggaa
atggaagtctgtgatgagtccttaagcgcgagaatactatcccataagccacatgaagca
tctaaagatgctcagaagaaagtgaccaaacaaataagagaggacggtcaagggacctca
ggtccaaagcgttgctttgccataaagtcctgcaagagaagagtaaaaccattagaaacc
actgacacacaaaatgagaaaacaaagacagttctgtctgccaacaacacccgcagactg
ttcaatggcgaggagacctgttacattattgacgcgagacaagagggcaacctcggccgc
tacatcaatcatagctgcagtccaaatttgtttgtccagaacgtctttgtggacactcat
gacctccggttcccatgggtggcgttctttgccagcaagcgcatcagggcaggtacggag
ttgacgtgggattataactatgaggtgggcagtgtggaggggaaggttctgctctgctgc
tgtggctcattgcggtgcactggaagactgctctga
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integrated database retrieval system
