Rhinichthys klamathensis goyatoka (western speckled dace): 130071570
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Entry
130071570 CDS
T09701
Symbol
dhx9
Name
(RefSeq) ATP-dependent RNA helicase A
KO
K13184
ATP-dependent RNA/DNA helicase DHX9 [EC:
5.6.2.6
5.6.2.4
]
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rkg03041
]
130071570 (dhx9)
03012 Translation factors [BR:
rkg03012
]
130071570 (dhx9)
Enzymes [BR:
rkg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
130071570 (dhx9)
5.6.2.6 RNA 3'-5' helicase
130071570 (dhx9)
Spliceosome [BR:
rkg03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
130071570 (dhx9)
Translation factors [BR:
rkg03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
130071570 (dhx9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
dsrm
OB_NTP_bind
Helicase_C
DEAD
HA2_N
HA2_C
Dicer_dimer
AAA_19
ResIII
AAA_14
nSTAND3
Motif
Other DBs
NCBI-GeneID:
130071570
NCBI-ProteinID:
XP_056092404
LinkDB
All DBs
Position
Unknown
AA seq
1275 aa
AA seq
DB search
MADIKNFLYAWCGKKKITPNYDIRAAGNKNRQKFVCEVRVEGYNYIGMGNSTNKKDAQSN
AARDFVNYLVRMKEISPGEVPALGVSVPDGGNGGNEEGVEFGNLPSNCPLPPHLAVKKES
EPSAASAPSAPVPGVTGLGYSGFGNAQWERGANLQEYYSKRQEQDDKATLESEEVDLNAG
LHGNWTLDNAKARLNQFFQKEKNQTDYKYSQVGPDHNRSFIAEMTIFVRQLGRKVFAREH
GSTKKLAAQSCALSLVRQLYHLGVIEAYTGLTKKKEGESVDVYEVNLSDDLQQQLHSIVQ
ELGIQIPPPPQDPNSPVSLVQGKLAHFEPSQRQSMAGVVPWSPPQINWNPWTSSNIDEGP
LAFCTPEQISTDLLQELNFQLEQDKDLQTILADRSQLPVKNFEEQIMAAIHNSPVVIIRG
ATGCGKTTQVPQYILDEFIQRGRASECNIVVTQPRRISAVSVSERVSFERAEEVGKSCGY
SVRFESVLPRPHASILFCTVGVLLRKLESGIRGISHVIVDEIHERDLNTDFLLVVLRDVV
QAYPDVRVILMSATIDTTMFKEYFFNCPVIEVHGRAHAVQEYFLEDCIQMTQFVPPPMDR
KKKDKDEDGGEEEVNCNVICGPEYSPETKRAMSQLNEKETPFELIEALLKYIETLEVPGA
VLVFLPGWNLIYSMQKHLEMNPHFGGHQYRILPLHSQIPREEQRRVFEPVPDGVTKVILS
TNIAETSITINDVVFVLDSCKQKVKLFTSHNNMTNYATVWASKTNLEQRKGRAGRVKPGF
CFHLCSRARFEKLETHMTPEIFRTPLHEVALSIKLLRLGAIGNFLSKAIEPPPLDAVIEA
EHTLRELDALDCNDELTPLGRVLAKLPIEPRLGKMMIMGCIFNVGDAVCTISAATCFQEP
FINEGKRLGFVHRNFAGTRFSDHVALLSVFQAWDEVRMGGEDAEIRFCEHKRLNMPTLRM
TWEAKVQLKEILINVGFPEECLLNQMFNNVGPDNNLDVVISLLTFGSYPNVCYHKEKRKI
LTTEGRNALIHKSSVNCPFSNHDMTYPSPFFVFGEKIRTRAISAKGMTLVSPLQLILFGS
KKITSNGEVVELDDWLKLQIPHDVAAGVAALRAAMEGLVVEVTKDPEYIRNLDPTNEHLL
NVIRLVSRPSSAGINLMATNQRFGDGPRPPKMARTDFGGGQEFRGRGGYRGGGGGGSWSG
GGYRGGGGYQGGGGGFRGSGGYRGGGGAGGGGYRGYGGGGSRGSGGYRGSNGGGGYGGRG
FRGGSGGWGGNRGGY
NT seq
3828 nt
NT seq
+upstream
nt +downstream
nt
atggcggacattaagaactttctgtatgcttggtgtggaaaaaagaagataactccgaac
tatgacatccgagctgctgggaataaaaacagacagaaattcgtgtgtgaggtgcgtgtg
gagggttacaattacattggcatgggaaattccaccaacaagaaggatgctcagtccaat
gctgcccgagattttgtcaattatcttgttcggatgaaagaaataagtcctggtgaagtt
cctgctctaggggtcagtgtacctgatggagggaatggagggaatgaagaaggtgttgag
tttggaaatctcccatccaactgtccactacctccacatctggctgtgaagaaggaatcg
gaaccttctgcagcttctgcaccttctgcacccgttcctggagtcaccggtttgggctac
tctggttttggtaatgcccaatgggagcgaggagccaacctgcaggagtattactccaag
agacaggaacaggatgacaaagcgaccttggaatcagaggaagttgatctgaacgctggc
ctgcatgggaactggactctggacaatgcgaaggcccgtctgaaccagttctttcagaag
gagaaaaaccaaacagactacaagtacagccaagtggggcctgaccacaacaggagtttt
attgctgagatgacaatctttgtaagacaacttggtaggaaggtttttgcccgtgagcat
ggctcaacaaagaagctagcggcccagtcttgtgcactttctcttgtccgtcagctttac
catttgggggttatagaggcttacacaggactgaccaagaagaaagagggagaaagtgtg
gatgtatatgaagtgaatctcagtgatgatttacagcagcaattgcacagtattgtgcaa
gaacttggcatccagatccctcctcctcctcaggaccccaacagtccagtatctctggtg
caagggaagttggctcactttgagccctcacaaaggcagagcatggcaggagtggtgccg
tggtctccaccgcagatcaactggaacccctggaccagctccaacatcgacgaaggaccg
ctggcattttgtaccccagaacagatcagcacagacctgctacaggagctcaactttcaa
cttgagcaggacaaagatctgcagacaattctagcggatcgaagtcaactgccagtcaag
aattttgaggagcaaatcatggccgccattcacaatagcccagtggtcatcattcgtgga
gccactggctgtggaaagaccactcaggttcctcagtacatcttggatgagttcatacaa
agaggcagagcatctgaatgcaatatcgttgttacacagccgagacggatcagtgctgtg
tcagtgtcagaacgtgtatcttttgagagagcagaggaggttgggaaaagctgtggctac
agtgtgcgttttgagtcagtcctgcccagacctcatgccagcatcctcttctgcacagtt
ggggttttgctgaggaagctggaatctggtatccgtggcatcagtcatgtgattgtggat
gaaatccatgagagggacttaaatactgatttcctgttggtagtgttgagagatgtggtc
caggcttaccctgatgtgcgcgtcatcctcatgtctgccaccattgacaccaccatgttt
aaggagtactttttcaactgtcctgtcatcgaggtgcatggacgtgcacatgctgtacaa
gagtatttcctagaagactgcattcagatgactcagttcgtaccaccaccaatggaccga
aagaaaaaagataaagatgaagatggtggagaggaagaagtgaactgtaatgtcatctgt
gggcctgagtatagtcctgagaccaagcgcgccatgtctcagctgaatgagaaggaaact
ccattcgagctgattgaggctttgctgaagtacattgaaacgctggaagtcccaggggct
gtgctagtcttcctcccaggctggaaccttatctattccatgcaaaaacacctggagatg
aacccacacttcggcggtcatcaataccgaatcctgccccttcactctcaaatccccagg
gaagaacagagacgagtgttcgagcctgtccctgacggtgtgactaaggtcattttatcc
acaaacatcgccgagaccagcatcaccatcaatgatgtggtctttgtccttgactcctgc
aagcagaaagtgaagttgttcacttctcacaacaatatgacaaactacgccacagtgtgg
gcctccaagaccaaccttgagcagaggaaggggcgagctggccgagtcaaaccaggcttc
tgctttcacctgtgcagcagagctcgctttgaaaaactggagacccatatgactccagaa
atcttccgcacaccgctgcatgaggtggccctcagcattaagctactgagactgggtgcc
atcgggaatttcttgtctaaagccattgagccgcctccattggatgccgttattgaagct
gaacatacactgagagagctggatgctctagactgtaatgatgagctgactccactggga
cgtgttctggccaaactgcccattgaaccacgtctgggaaagatgatgatcatgggatgc
atctttaatgttggagatgcagtgtgcaccatctcagcagcgacctgtttccaagagccc
ttcatcaacgagggaaaacgtctcggctttgttcataggaactttgcgggcacacgtttc
tcagatcacgtggctttactctctgtcttccaggcctgggatgaagtccggatgggaggt
gaggacgcagagatcaggttttgtgagcacaagaggctgaacatgcccactttgaggatg
acctgggaggccaaggtccagctaaaggagatccttattaacgttggcttccctgaagag
tgcctcctgaatcagatgtttaacaatgtgggaccagacaataacttggatgtggtgatc
tctctgctgacgtttggctcttaccccaacgtgtgctaccacaaagagaaaaggaagatc
ctgaccacagagggacgaaatgctctcattcacaaatcctcagtcaactgtcctttcagc
aaccacgatatgacgtatccatctcccttttttgtctttggggaaaagatccgaactcga
gccatctcagcaaaaggaatgactcttgttagtcctcttcagctcattctgttcggctca
aagaagatcacatccaatggagaagttgttgagcttgatgattggctcaaattgcagatt
ccccatgatgtagctgctggtgtggctgctctgagggcagcaatggaaggcctggtggtg
gaggtgaccaaagacccggaatacatccgaaatttggatcccaccaacgagcacttgttg
aacgtcattcgacttgtgtctagaccctcgtcagcaggcatcaacctcatggccactaac
caacgctttggagatggtccacgtccacccaagatggcccgtaccgattttggaggtggc
caagagttcaggggccgaggaggatacagaggtggcggtggtggtggatcttggtctggt
ggaggatacagaggaggtggaggataccagggtggtggaggcggcttcagaggatcagga
ggttatcgtgggggtgggggtgctggtgggggtggatacagggggtatggtggtggtggg
tccaggggatctggtggatacagaggatctaatgggggtggaggatatggagggagggga
ttcagaggtggctcaggtgggtggggtggaaacaggggtggttattaa
DBGET
integrated database retrieval system
