Rhinichthys klamathensis goyatoka (western speckled dace): 130072221
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Entry
130072221 CDS
T09701
Symbol
cacna2d1a
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-1a
KO
K04858
voltage-dependent calcium channel alpha-2/delta-1
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg04010
MAPK signaling pathway
rkg04260
Cardiac muscle contraction
rkg04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
130072221 (cacna2d1a)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
130072221 (cacna2d1a)
04261 Adrenergic signaling in cardiomyocytes
130072221 (cacna2d1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rkg04040
]
130072221 (cacna2d1a)
Ion channels [BR:
rkg04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
130072221 (cacna2d1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VGCC_alpha2
VWA_N
VWA
VWA_3
VWA_2
dCache_1
MCP-like_PDC_1
SOAR
zf-C2HC_2
Motif
Other DBs
NCBI-GeneID:
130072221
NCBI-ProteinID:
XP_056093209
LinkDB
All DBs
Position
Unknown
AA seq
1080 aa
AA seq
DB search
MMSDRIMDTLRLSAALLLLLSLFSCGSAIQFPDSQLTRKWAEQMQEELVQLIDAESGIQK
LKEIFKDLHKHYTVKQNNAQQLVAKAAREIDKLLANRSKALEALATAAEKLQMEHQWKDD
LDVNETIYYNAKDKFHINDTEMHQNRVRPEFKEDPAFKRLVSYNTTAVHIPTDIYEGSNI
ILNELNWTAALDEVFRKNKEDDPSLLWQVFGSATGLARYFPASPWVDTKNTPNKIDLYDV
RRRPWYIQGAASPKDMLILVDASGSVSGLTLKLIRTSVSEMLETLSDDDYVNIVSFNNSA
KSVACFENLVQANVRNKKILKEAVQKITANGTTDYKIGFKEAFDQLSSMNVSRANCNKII
MLFTDGGEDRASEIFEEYNPLKKVRIFTFSVGQHNYDKTPIQWMACNNKGFYYEIPSIGA
IRINTQEYLDVLGRPMVKEDKKAKNVQWTNVYVDALELGLVITGTLPVFNKTRNSRDKTK
GQSQLILGVMAIDVSLDDIKRLTPRFTLGPNGYYFAIDPNGYVLLHPNLRPKDLKSQEPV
TLDFLDAELEDEMKVEIRRNMIDGLKGQKGFHTLVKSQDERYIDRGTRTYTWAPVNETDY
SLALVLPDYSVSYIKATIGDTITQAKFSESLQVDKFEEYGYTLIAPRDYCTDLKAQSDNN
TQFLIDFNQYIDTKTPNNPLCDMDLINRMLLDAGITAELAKHWSEQGLNDRIKAKFVATD
GGVTRVYPASAGPEWTEEAETYESSFYKRSLDNDVYIFTSYAINKTHDSILASRAMDLRI
DEFMLKPAVVGVKLDIQTWMESFMNTTITPKCVGEICGCRRNDAYLDCVLLDDGGFLVMA
NQDEHMSMIGTFFGMIDPSLMRNMMNVSLYSLNKTYDYQALCEPTRESKAAAGLRSVYVP
TIADILNIGWWASAAAWSILQQLFVSITFPNFLEAVEQDDGLSEIPHKESCIKEQTQYFF
ENNETTFKGTVECLNCSRQFIAEKLPKTNLVLIVADTQMSCQICDENPFSQEEKPSPGPD
PCKLAQNPRYRKGPKECFDNNFDEQNEECGASGLTPSIVSVVILQLLLLWLLIGRGQCLS
NT seq
3243 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcagacagaataatggatacactcagattgtctgctgctcttcttctacttctg
tctttattcagctgtggaagcgctatacagtttcccgactcccaactgacccgcaaatgg
gcagaacagatgcaagaggagcttgtgcagttgatcgatgctgagagcggcatacaaaag
ctcaaagaaattttcaaggatttgcacaaacactatactgtgaagcaaaacaacgctcaa
cagctggtggcaaaagctgcgcgtgaaatcgacaaacttcttgccaaccgctccaaagct
ctagaagcgctggcgactgctgcggagaaactgcagatggaacaccagtggaaggatgac
cttgacgtgaatgagaccatctactacaatgccaaggacaagtttcacattaatgacacg
gaaatgcaccaaaaccgggtccgaccagaattcaaagaggatcctgctttcaaacgcctt
gtttcatacaatacgacagcagtgcacattcccacagatatttatgagggctccaatata
atcctgaatgagctaaactggactgcggctctggatgaggtcttcaggaagaacaaggaa
gatgacccgtccctcctctggcaggtgtttggcagtgcaactggcctggctcgatacttc
ccagcttctccttgggttgacacaaagaacacaccgaacaagatcgacctgtatgatgta
cgccgaaggccctggtatatccagggtgcagcttcacctaaagacatgttgatcctggtg
gatgcgagtggaagtgtgtcgggcctgacgttgaagctcattcgcacttccgtcagtgag
atgctggaaaccctctctgatgatgattacgtcaacattgtctctttcaacaattcggcc
aagtcggttgcctgctttgaaaacctggtccaagcaaacgtccgcaataagaagattctg
aaggaggcggtgcagaagatcactgcgaacggcaccactgactataaaatcggcttcaag
gaggcgtttgaccagctctcctcaatgaatgtttcaagagcaaactgtaataagatcatc
atgctattcactgacggaggggaggacagagcttcagagatctttgaagagtacaacccc
ctcaagaaggttcgaatcttcaccttctctgtgggccagcacaactatgataagacacca
attcaatggatggcttgcaataacaaaggtttttattatgagattccatccattggagcc
atcaggattaacacccaggagtacctggatgtgttgggcagacccatggtgaaagaagac
aagaaagcaaaaaacgtgcagtggaccaacgtttacgtggatgcactggaactgggcctc
gtgattacaggcactctgccagtgttcaataaaaccaggaacagtcgagacaagactaag
ggccagagccagttgattctgggggtgatggccatagacgtgtctctggacgacatcaag
agactgactcctcgtttcactctcgggccaaatggatattacttcgccatcgaccccaac
ggctatgtgctacttcatcccaaccttcggccaaaggatctcaagtctcaggaacccgtg
acgttggacttcctggatgctgaactagaggatgaaatgaaagtagagatcagaagaaac
atgatagatggtctcaagggtcaaaagggattccacacacttgtaaagtcacaagatgag
cgttacatagacaggggcaccagaacctacacttgggctccagtcaatgagacagactac
agtcttgctttagttctacccgattacagtgtgagctacatcaaggccactattggagat
accatcactcaagcaaaattttctgaaagcctgcaggtggacaaatttgaagagtatgga
tatactttaatagcacccagagattactgcacagatctgaaagctcagagtgacaacaac
acacaatttctcatcgacttcaatcaatacattgacacaaagacccccaacaacccactg
tgtgatatggacctaataaataggatgctgctggacgctggcatcaccgctgaactggcc
aaacactggagcgaacaaggactgaatgacagaatcaaggctaagtttgtggcgacagat
ggcggtgtcactagagtctatcctgcgagtgctggtccagaatggacagaagaggcagaa
acgtatgagtccagtttctacaagagaagtctagacaatgatgtttatatatttacatca
tacgcaatcaataaaactcacgattcaattttagcaagcagagcgatggacctgagaatt
gatgaattcatgctgaaaccagcagttgtcggtgtaaaactggatatacagacctggatg
gaaagcttcatgaacactacaattacgcctaaatgtgttggtgaaatctgtgggtgcagg
agaaatgatgcgtatctggactgtgtacttctggacgatggaggcttccttgtcatggcc
aatcaggacgagcacatgagtatgatcggaacgtttttcgggatgattgaccccagccta
atgagaaatatgatgaatgtctccctctactcactcaacaaaacctatgactaccaggcc
ctctgtgaacccaccagagaatctaaagctgccgctggtctcagatcagtctacgtgccc
accatagccgacatcctgaacattggttggtgggcttctgcagcagcctggtcaatattg
cagcagttgtttgtcagcatcacatttcctaatttccttgaggcagtggaacaagatgat
ggcctgtctgaaataccacataaagagagttgcattaaagagcagacgcagtatttcttt
gagaacaacgagacaacttttaaggggactgttgagtgtctaaactgctctaggcagttc
atagctgaaaagcttccgaagacaaatctggtgcttattgttgctgacacacagatgagt
tgccagatatgtgatgaaaatccattctcccaggaagaaaagccttctccgggtccagat
ccctgcaagttagcccagaacccacggtatcggaaaggtccgaaagagtgctttgacaac
aactttgatgagcagaatgaggaatgtggggcatcaggtctgactccatctatcgtgtcc
gtggtcatcctccagttgctgctgctctggcttcttattggacgaggacagtgtctctcg
tga
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