KEGG   Rhinichthys klamathensis goyatoka (western speckled dace): 130075990
Entry
130075990         CDS       T09701                                 
Symbol
rbx1
Name
(RefSeq) E3 ubiquitin-protein ligase RBX1
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
rkg  Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg03420  Nucleotide excision repair
rkg04110  Cell cycle
rkg04114  Oocyte meiosis
rkg04120  Ubiquitin mediated proteolysis
rkg04141  Protein processing in endoplasmic reticulum
rkg04310  Wnt signaling pathway
rkg04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:rkg00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    130075990 (rbx1)
   04120 Ubiquitin mediated proteolysis
    130075990 (rbx1)
  09124 Replication and repair
   03420 Nucleotide excision repair
    130075990 (rbx1)
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    130075990 (rbx1)
   04350 TGF-beta signaling pathway
    130075990 (rbx1)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    130075990 (rbx1)
   04114 Oocyte meiosis
    130075990 (rbx1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:rkg04121]
    130075990 (rbx1)
   03400 DNA repair and recombination proteins [BR:rkg03400]
    130075990 (rbx1)
Enzymes [BR:rkg01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     130075990 (rbx1)
Ubiquitin system [BR:rkg04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   130075990 (rbx1)
  Multi subunit type E3
   SCF complex
    Ring finger protein
     130075990 (rbx1)
   Cul2 complex
     130075990 (rbx1)
   Cul3 complex
     130075990 (rbx1)
   Cul4 complex
     130075990 (rbx1)
   Cul7 complex
     130075990 (rbx1)
   Cul8 complex
     130075990 (rbx1)
   Cul9 complex
     130075990 (rbx1)
DNA repair and recombination proteins [BR:rkg03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      130075990 (rbx1)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      130075990 (rbx1)
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-C3HC4_2 zf-RING_11 DUF8003 PHD_NSD
Other DBs
NCBI-GeneID: 130075990
NCBI-ProteinID: XP_056096840
LinkDB
Position
Unknown
AA seq 108 aa
MAAAMDVDTPSGANSGASKKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQ
ASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYGH
NT seq 327 nt   +upstreamnt  +downstreamnt
atggcggccgcgatggatgtggacaccccgagtggagccaacagtggagccagtaagaaa
cgttttgaagtgaaaaagtggaatgcggtggctctgtgggcttgggacattgtggtggac
aactgtgccatttgtagaaatcacattatggacctctgtatagagtgtcaggccaatcag
gcatcagctacatcagaggagtgcacagtggcctggggagtctgcaatcacgcgtttcat
ttccactgcatctctcgctggctgaagaccagacaggtgtgtccactggacaacagagag
tgggagtttcagaagtatggccattag

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