Rhinichthys klamathensis goyatoka (western speckled dace): 130076049
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Entry
130076049 CDS
T09701
Symbol
nr1i2
Name
(RefSeq) nuclear receptor subfamily 1 group I member 2
KO
K08540
pregnane X receptor
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rkg03000
]
130076049 (nr1i2)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
rkg03310
]
130076049 (nr1i2)
Transcription factors [BR:
rkg03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
130076049 (nr1i2)
Nuclear receptors [BR:
rkg03310
]
1. Thyroid hormone like
1I. Vitamin D3 like receptor
130076049 (nr1i2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
zf-RRPl_C4
Motif
Other DBs
NCBI-GeneID:
130076049
NCBI-ProteinID:
XP_056096924
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Position
Unknown
AA seq
427 aa
AA seq
DB search
MCILQIRMSKEMEELSPLGDSGHGDGSEEETEEDDEPKICQVCGDKSTGYHFNAMTCEGC
KGFFRRAMKRPAQLSCPFQNACVITKSNRRQCQSCRLQKCLSMGMKRELIMSDEAVEKRR
MQIKRKRMHEEPVMLSPQQEAVIEELLSAHQKTFDMTCAQFIQFRPLDRDQNSMSEYSRE
PKTGRYSNPTMHKPPPEDGVQRTVNLSSPSSSFQSLENKEKKWLKGAIFTSLPHFTDLTT
YMIKNVINFSKTLAMFRTLIIEDQISLLKGATFEIILIHFNMFFNEMTGIWECGPLQYCL
DDAMRAGFQQHLLDPMMNFHYTLRKLHLHEEEYVLMQAISLFSPDRPGVTHHNVVDRNQE
TLALTLKTYIEAKRAEPDKHLLYPKIMACLTEMRSMNEEYTKQVLKIQDIQPEVSPLLLE
IISKDGC
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgtgcatacttcagatcaggatgagtaaagaaatggaggagctttctcccctgggcgac
tcgggacacggggatgggtctgaggaagaaacagaggaggatgatgagcccaaaatttgt
caagtatgcggtgacaaatccacaggctaccactttaacgccatgacatgtgagggctgc
aaaggcttcttcaggcgtgccatgaagcgacccgcacagctcagctgcccgtttcagaat
gcctgtgtcatcaccaagagcaacaggagacagtgccagtcctgccgtctccagaaatgc
ctctcaatgggcatgaagagggagctgatcatgtcggatgaggccgtggagaagcggagg
atgcagatcaagaggaagaggatgcatgaggagcccgtaatgctctcccctcaacaggaa
gctgtcatagaggagctgctctccgcacatcaaaagaccttcgacatgacttgcgcccaa
ttcattcagttccggcctttagatcgggatcaaaattccatgtctgagtacagtcgagaa
ccaaaaaccggcagatactctaacccaaccatgcataaaccaccgcctgaagatggagtg
cagcggacggtcaacctctcatccccttcctccagctttcagagtcttgaaaataaagag
aagaagtggcttaaaggtgccattttcacctctttgccacattttacagacctcaccaca
tacatgatcaagaatgtaatcaacttcagcaagacgcttgcaatgttcaggactctgatc
atagaggaccagatctcactgctgaagggcgctacctttgagatcattctgattcacttc
aacatgttctttaatgagatgacaggcatttgggagtgcggcccgctgcagtactgcctg
gatgacgccatgcgagctggttttcagcagcatctgctggaccctatgatgaatttccat
tacacattgcgcaagctgcacttgcatgaagaggagtatgtgctgatgcaggccatctcg
ctcttctcaccagatcgacctggtgtgacgcatcacaatgtggtcgaccgtaaccaggaa
acgctagctctcaccctgaagacctacatcgaggcaaagagggccgagccagataagcat
ctgctgtacccgaagatcatggcgtgcctgaccgagatgaggagtatgaacgaagagtac
acaaaacaggtgctgaaaatccaggacattcagcctgaagtgtctccgcttttgttggaa
ataataagtaaagacggctgctag
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