Rhinichthys klamathensis goyatoka (western speckled dace): 130076729
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Entry
130076729 CDS
T09701
Symbol
prdm6
Name
(RefSeq) putative histone-lysine N-methyltransferase PRDM6 isoform X1
KO
K20795
[histone H4]-lysine20 N-methyltransferase PRDM6 [EC:
2.1.1.361
]
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg00310
Lysine degradation
rkg01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
130076729 (prdm6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rkg03000
]
130076729 (prdm6)
03036 Chromosome and associated proteins [BR:
rkg03036
]
130076729 (prdm6)
Enzymes [BR:
rkg01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.361 [histone H4]-lysine20 N-methyltransferase
130076729 (prdm6)
Transcription factors [BR:
rkg03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
130076729 (prdm6)
Chromosome and associated proteins [BR:
rkg03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
130076729 (prdm6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2
zf-C2H2_4
zf-H2C2_2
SET
zf-C2H2_11
zf-C2H2_jaz
Zap1_zf1
zf-C2H2_15
HAT_Syf1_CNRKL1_N
Motif
Other DBs
NCBI-GeneID:
130076729
NCBI-ProteinID:
XP_056097900
LinkDB
All DBs
Position
Unknown
AA seq
526 aa
AA seq
DB search
MRVHHPSSVSDMLKPSEPSGSAFLKVDPTYIQHWQQLFPQNPVPVPVPRASLISVSSSSS
TESPARSLSHALFDTGAASQAKELCLSSNFKNDKGSRLKLSSEELDYYLYGQQRMEIIPV
NNSNGDANNRCDMCADNRNGECPMHGPLHSLRRLVGTSGSSGPVPTPDVPDWLRDLPREV
CLCTSTVPGLGYGICAAQRIPQGTWIGPFQGVPLTLEKLQSGPVRNSRHLWEIYDQEGTL
LHFIDGNEPSKSSWMRYIRCARHCGEQNMMVVQYRSCIFYRACSDIPRGTELLVWYNDSY
TSFFGIPLQCVAQDENLNVPSTVMEAMTRQDSLQPFSKSPKPSPLALRSTVFPQSPCSRS
FSLMDKTGHIESSLNQLSVKNQRVLASPTSTSQLSSEFSDWHLWKCGQCFKTFTQRILLQ
MHVCTQNPDRPYQCGHCSQSFSQPSELRNHVVTHSSDRPFKCGYCGRAFAGATTLNNHIR
THTGEKPFKCERCDRSFTQATQLSRHQRMPNECKPISESSESIQVD
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgagagtccatcatccctcctcggtgtcggacatgctgaagccgagcgagcccagcggt
tctgctttcctcaaagtggacccgacctacatccagcactggcagcagctgttcccgcag
aacccggtgccggttccggtcccgagagccagcctgatctccgtgagctcgagctcgtcc
accgagtctcccgcgcgctccctcagtcacgcgctgttcgacaccggagccgcttctcaa
gccaaagaactttgtttgtcgtccaactttaagaacgataaaggctcgcgactgaagctg
agctccgaggaactggactattatctgtacgggcagcagaggatggagatcatcccggtc
aacaacagcaacggagacgccaataaccgctgtgacatgtgtgctgataaccgtaacggg
gagtgcccgatgcacgggcccctgcactcgctgcggcggctggtgggcaccagcggctcc
tcggggcccgttcccacgccggacgtcccggactggctccgggatctgcctcgagaggtg
tgtctgtgcaccagcaccgtcccgggcctcgggtacggcatctgtgcggcccagcggatc
ccacagggaacgtggatcgggcccttccagggcgtcccgctcacgctggagaagctgcag
tcggggcccgtcaggaactcacgacacttgtgggagatctacgatcaggaaggaacgcta
ctgcacttcatcgacgggaacgagcccagcaagtcgagttggatgaggtacatccgctgc
gctcgacactgcggggagcagaacatgatggtggtgcagtacaggtcgtgtatcttctac
cgggcgtgctccgacatccctcgagggaccgagctgctggtgtggtacaacgacagctac
acgtccttcttcgggatccccctgcagtgcgtcgcacaagacgaaaacctgaacgtgccg
tcgactgtaatggaggccatgacgcgtcaggactcgctccagcccttcagcaagagcccg
aagccctcgccgctggccctgcgctccacagtgttcccccagtcgccctgctcgcgcagc
ttctctctgatggacaagacgggccacatcgagtccagtttgaaccagctgagcgtgaag
aaccagcgcgtgctggccagtcccacgtccaccagccagttgagctcggagttcagcgac
tggcacctgtggaagtgtggccagtgtttcaagaccttcacgcagagaatcctgttgcag
atgcacgtgtgcacgcagaaccccgacagaccgtatcagtgtggacactgctctcagtcg
ttctcccagccgtcggagttgcgtaatcacgtggtcacacactccagcgaccggcccttc
aagtgcggatactgtggacgagcgttcgccggcgcgaccacactcaacaaccacatacgc
acacacaccggggagaagcctttcaagtgcgagcgatgcgaccggagcttcacacaggcc
actcagctcagccgacaccagcggatgcccaacgagtgcaaacccatcagcgagagcagc
gaatcaatccaggtggattaa
DBGET
integrated database retrieval system
