Rhinichthys klamathensis goyatoka (western speckled dace): 130077930
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Entry
130077930 CDS
T09701
Symbol
nphs1
Name
(RefSeq) nephrin
KO
K24496
nephrin
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
rkg04990
]
130077930 (nphs1)
Domain-containing proteins not elsewhere classified [BR:
rkg04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
130077930 (nphs1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
C2-set_2
I-set
ig
Ig_2
fn3
C2-set_3
Ig_DSCAM-DSCAML_C
NDNF
SRCR
Motif
Other DBs
NCBI-GeneID:
130077930
NCBI-ProteinID:
XP_056099339
LinkDB
All DBs
Position
Unknown
AA seq
1170 aa
AA seq
DB search
MIWLTTTTSVTEEQTEIDYEDCFSQNGLSLDDYVKEYLELYHEVRWDDETLKQGFWKVPP
SQPYIQQESDEPWVEGDEYTVTCIAPDAKPPAEITMFRDGEELTEIDSFTMSGSHDKLLT
THAEVIIRAQSSYDTRQLTCRAKNPASPRALETGMTMRVYFPPQAPVIMGLENEEVKAGS
FLRVVCISYGGNPLATLHWIKNGEVLSTSWEVDVVSRRSSSMLRMEVKPEDNHAVLQCES
VNQVSRSPMSLTRTLTVVFEPAEVKLLGSFEAVEGQEINLCCYTSSSNPPVHIRWWLGFK
ELNRTDVTISEGDNGGMMTMSNLTHKVSREDNGLPLTCEAFNKGTRFSSVRSEELIVYYP
PQKVWLDAPPPNVFLHSGTTLRLVCFSSGGNPTGQLVWLKNNKVVPTASKQVSSERGVSR
DLLLTLQPSDNLATYRCDSSNKAKKVLSAQSKLRVLFPAVSVKIVAKQKELRRGQTLDLD
CLAGSSNPTANISWSLGPIILKGVDQAPKKAEFGGMSRTSKLSLNLGSHHWKKRITCQAF
SNVLSEGVNNFYSLDVLFPPEFSDDQPDLVQVIEDETATLPVKVLANPDEITCEWIFQGE
KLVKERDPRYHFDDWTLEIVNVSRRDGGDYIIECSNAEGTNHTKLKLDVQYAPTVHMKSD
PVSVNLGDTADLLCVADANPITSSMFSWKWMGEEEVDDLGEQSEDEGTGLLTIYEVTRDR
AGFYQCTADNGIAPPGSVEGQLIVRFAPELQKGPQWRKVASRGDGSNDANVVCQAQGVPR
VHFTWAKNGFPLDLGNPRYEQKTVVTGTVHTSILTVINVSAALDYAIFSCTAHNSMGEDS
LDVQLLSTNHPDPPSDLKLLRVNHNSVTLEWMPGFDGGLTQNFRVRYQWSGSASFMYVDV
FPPTATVYTVTGLNPSTAYNFSVNALNTMGESSYADNNKILTVTTADAEEADGGVSPEDQ
DSAFAGRGLPVYAVVILVVGGLLLFLNPLSCFLLVRCKSRGRSLKEDTRSISRETKSEEQ
RSMSSSSTRYASRELINASAQRTLLIDSSSEPDSSVYETYGRQQSSHYYYSPALYTHPEG
PEDHDGRFGTSPLAHDYEEVRGWGTSQDLQSYSLLPPAGHSDPRAPVSTYHEGRVFGKAD
VDVTAGVYDSMVYRRRRDTDLPFELRGELV
NT seq
3513 nt
NT seq
+upstream
nt +downstream
nt
atgatttggttaacgaccacgacaagtgtgacagaagaacagaccgaaatagattatgag
gactgtttttcacaaaacggcctgtcgctggacgattatgtgaaggagtacctggaacta
tatcacgaggtgcgctgggacgatgaaactttgaaacagggtttctggaaagtcccaccc
tcacagccgtacatccagcaggagtctgatgagccgtgggtggagggagacgaatacacg
gtgacctgcatcgctcctgatgcaaaacctcctgcagaaatcaccatgttcagagatgga
gaggagctgacggaaatcgattctttcacaatgtcaggctcacacgataagcttttaacg
actcatgccgaagtcatcatcagggcacaaagctcgtacgacacacggcaactgacgtgt
cgagcgaagaacccagcttcccctcgagctcttgagactggcatgaccatgagggtatac
tttcccccgcaggctccggtgatcatgggattagaaaatgaagaggtcaaagctggttcc
tttctgagggtggtgtgcatatcgtacgggggcaaccctttagccactttgcattggatt
aagaatggagaagtcctgtccactagctgggaggtggacgttgtgtcacgtaggtccagc
agcatgttgagaatggaggtgaagccagaggacaatcatgctgtgctgcagtgcgaaagc
gtcaaccaagtgtctcgttcaccaatgtccctcactcgcactcttaccgtcgtgtttgag
ccagctgaagtaaaattactgggctcctttgaagctgtagaaggacaggagatcaatctg
tgctgttacacttcctccagtaatccaccggttcacatacgctggtggctcgggttcaag
gagctcaacagaacggatgttaccatctctgagggggacaatggtgggatgatgacgatg
tctaacctgacacataaagtgtcacgtgaggacaacggtcttcctctgacttgcgaggca
ttcaacaaaggcacccgcttctctagtgttcgatctgaagagctcatcgtttactatcct
cctcagaaggtgtggttagatgctcctccaccaaacgtcttcttacactctggtacaact
ctccgtttagtctgtttctccagtgggggaaatcccacaggtcagctggtgtggttgaag
aacaacaaagtcgtgccaaccgcatcgaagcaggtgtcttcagagcgtggtgtgtcacga
gatctccttctcaccctccagcccagcgacaatctggccacctaccgctgcgactcctcc
aacaaagccaagaaagtgctctccgctcaaagcaaactcagggttctgtttcccgcagtg
agcgtgaagatcgtggccaagcagaaggagctgcgcaggggtcagactctggatctggac
tgcctggctggcagcagcaatcccactgcaaatatcagctggagtttgggccctatcata
ctgaaaggagttgaccaggctcctaaaaaggctgaatttggtgggatgtcccgaaccagt
aagctgtccctcaatcttggctcccatcactggaagaaaaggatcacctgccaggccttc
agtaacgtgctgtccgagggtgtcaataacttctacagtctcgatgtgctctttcctccg
gagttttcggatgaccagcccgatctggtccaggtcattgaggatgaaaccgccacactt
cctgtcaaagtcttggccaatccggacgaaatcacctgcgagtggatttttcagggcgag
aagcttgtgaaagaaagagatcctcgttatcacttcgacgactggaccctggaaatcgtg
aacgtttctcggcgggacgggggcgattacatcatagagtgttccaacgctgaggggacg
aaccacacaaagctcaaactggatgtacagtatgccccgactgttcatatgaagtccgat
cctgtgtctgtgaacttgggagacaccgctgacttactgtgtgtcgctgatgccaacccc
atcacctccagtatgttttcgtggaagtggatgggtgaagaggaagtagatgatctggga
gagcagagtgaagatgaaggcactggtttgttaactatatacgaggtgacccgtgaccgg
gcaggtttttaccagtgtacagcagacaacggcatagctcctccaggcagtgtagaagga
cagctcatcgtgcgctttgctccagagcttcagaagggaccgcagtggaggaaggtggcc
agccgaggggacggcagcaatgatgcaaatgtggtgtgtcaggcacaaggcgttcctcgt
gtgcacttcacctgggcaaagaatggattccctttggacttgggcaaccccaggtacgag
cagaagacggtggtgacaggtaccgtccacaccagcattctgaccgtcataaacgtgagt
gcagctctggactatgccatcttctcctgcactgcccacaacagcatgggagaagactct
ctagatgtccagctcctcagcaccaaccaccccgatcccccgtccgacctgaagctgctc
cgtgtcaaccataactccgtgactctggagtggatgcccgggtttgacggtggtttgact
cagaacttccgtgtcaggtaccagtggtcaggatcggcgagtttcatgtatgtggacgtg
tttcctccgacagctacagtgtataccgtcacgggcctcaacccttccactgcgtacaac
ttttcggtcaacgctctcaatacaatgggagagagcagctatgcagacaacaacaaaata
ctgacggtcaccaccgctgatgcggaggaagctgacggtggggtctcaccagaagaccag
gattcagcttttgcaggtcgtggtcttcctgtctatgccgtggtgatcctggttgtgggc
ggcctcctgttattcctaaatccactgagctgctttctattggtcagatgtaaaagcaga
gggcggagcctgaaagaggacaccaggagcatttcacgggagacgaaaagcgaggagcag
aggtccatgtcgagcagctcaacacgctatgcgagcagagagcttatcaacgcctcggca
cagcgaacgctcctcatcgacagcagctctgagcctgacagcagcgtctatgagacctac
ggacggcagcagagttctcattattactacagtcctgcgctgtatactcaccctgaaggc
cccgaggatcatgatggcagattcggcaccagccctctcgctcatgactatgaggaggtg
agaggctgggggacgtcccaggacctgcagagctactcactgctgccccctgctggccac
tctgatccacgcgcaccagtctccacataccatgagggaagggtgttcggtaaagctgat
gtggacgtaacagccggagtttatgattctatggtgtacagacgcaggagagacacagac
ttgccgtttgagctcagaggggagcttgtttaa
DBGET
integrated database retrieval system
