Rhinichthys klamathensis goyatoka (western speckled dace): 130080327
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Entry
130080327 CDS
T09701
Symbol
flnca
Name
(RefSeq) filamin-C isoform X1
KO
K27393
filamin-C
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
130080327 (flnca)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
rkg04812
]
130080327 (flnca)
Cytoskeleton proteins [BR:
rkg04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
130080327 (flnca)
Intermediate filaments
Intermediate filament-binding proteins
130080327 (flnca)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Filamin
Ig_GEX2_N
CH
Big_3_5
Y_Y_Y
Motif
Other DBs
NCBI-GeneID:
130080327
NCBI-ProteinID:
XP_056101655
LinkDB
All DBs
Position
Unknown
AA seq
2717 aa
AA seq
DB search
MSNYTHLDDLPPQYYQGTDLGEEEEEEMPATEKDLAEDAPWKKIQQNTFTRWCNEHLKCV
NKSLTDLQKDLGDGLKLIGLLEVLSQKKMYRKHNVRPNFRQMKLENVSVALEFLDRERIK
LVSIDSKAIVDGNLKLILGLIWTLILHYSISMPMWDDEDDEEVKKLTPKQRLLGWIQNKV
PELPINNFNKDWRDGKALGALVDNCAPGLCPDWQKWDPSQPVANAREAMQQADDWLGVPQ
VIAPEEIVDPDVDEHSVMTYLSQFPKAKLKPGAPLKPKQLYPKKAKAYGPGIEPQGNMVL
KPALFTVETLEAGLGEVIVYVEDPEGHTEEAKVVANNDKKRTFSVTYVPKVEGPHKVKVL
FAGQDIDKSPFMVNVAKALGDPSKVQARGPGLEAVGNMAHKPTYFDIYTAGAGAGDVSVV
IVDPQNKNNTVEVILENKGDNIFRCTYKPLQEGPHTIHVTFAGQPIPNSPFKVNISEAHP
KPSAVPPKQIPPHKKKASNANACRATGRGLQPKGVRVKEVADFTVFTKGAGSGELKVSVK
GPGGVEVPVKVLDVGDGEFKCDYCPVKPGKYNVNITWGGQPIPRSPFEVEVSKEAGPQKV
RAWGPGLKTGMVGKSADFVVEAIGTEVGTLGFSIEGPSQAKIECDDKGDGSCDVRYWPTE
PGDYAVHVICDDEDIKDSPFMAHILPAANDVFPEKVKAFGPGLEPTGIIVNKSTQFTVDA
REAGKGSLKIYAQDAEGCVIDIQITDKGDGTFVCMYVPTKPVKHTIILTWGEVNVPKSPF
RVLVGEGCHPDKVKVYGPGVEKTGLKADEPTYFTVDCSKAGQGDISIGIKCAPGVVGPAE
ADIDFDIIKNDNDTFTVKYTPPGPGRYTIMVLFADQEIPSSPFKVKVDPSHDAGKVRAEG
PGLNKTGIQVDIPTHFTIFTKGAGKAKPEVQFKTAFKGNAVKDFEIIDNHDYSYTVKYTA
LHQGEMAIMVTHGGDPVPKSPFNITVAPSLDLGKVKVEGLNEKVEVGKDQEFIVSTKGAG
GQGMVQVSITSPSGRPIPCKLESDKTKEATCVKYIPPEEGHYKVDISYDGNPVPRSPFSV
EGLMPADPSKVRAYGPGLKGGIVGQPAPFTIDTKGAGAGGLGLTLEGPCEAKIECQDNGD
GTCSVFYLPTEAGDYNINILFGEAHIPGSPFKAAVKPALDAGKVIVSGPGLERAKAGEVA
SFTVDCSRAGEAELTIEIVSDSGAQAEVCIKKNSDGTFSVTYTPLFHGTHTITIKYGGQQ
VPKSPIHVQVEPSVDTSGIKVYGPGVEPRGVLREVTTHFIVDTRAQTKTKGGNHVKIRII
NPSGANTDAYITDKGDGTYRVEYTAFEDGLHLIEVFYDEVAVPKSPFKVSVVEGCDPTRV
RAYGPGLEGGLVNKPNCFTVETRGAGTGGLGLTIEGASESKMFCKDNKDGSCSVEYMPFT
AGDYDVNITYGGQPIPGSPFRVLVKDVVDVSKVKCSGPGLANRVTAHVPQTFTVDSSKAG
LAPLEVQLYGPKGTLEPVVVKNNRDGTHTVNYTPAQEGPHTVSVKYANQEVPGSPFKVNS
APSHDASKVRASGPGLDTKGVAASLPVEFTIDARDAGKGLLTVQILDPEGKPKKASIQDN
RDGTYTVSYVPDMTGRYTITIKYGGDNIPYSPYNIQALPTGDASKCLLTVSIGGHGVESL
GPNIKMAEETFITVDAKAAGKGKVTCTVLTPNGIELDMDVTENPDGTFDIYYTAPEPGKY
VITIRFGGQHIPKSPFQVMATDQPVAPRDDTKPMFQPLNLVIPFTVQQGELSGEVRMPSG
KTARPFIRDNKDGTVTVQFQPTERGLHEMDIKYDGNHIPGSPLQFYVDVMNSGMVTAYGP
GLCHGIINKLATFTVVTKNAGQGGLSLAVEGPSKAEISCKDNKDGTCTVSYLPTAPGDYN
IIVKFDNSHIPGSPFTAKITGDDSLRRSQMNVGTAADVSLKITETDLSYLTASIKAPSGK
DEPCLLKRLPNQHIGLSFTPKEVGEHEVSVRKSGTHVNNSPFKIMVGPTEIGEASRVKAF
GKGLVEAHTFEVAEFFVDTRNAGYGGLGLSIEGPSKVDINCEDVEDGTCKVTYCPTEPGN
YIINIKFADKHIPGSPFTVKITGEGRMKESITRKRQAASIASVGSACDLNLKIPGNWFQM
MSAQERLTRTFTRSSHTYTRTERTEISKSHAGETKREVHVEESTELGGDPFRDVFGSFLG
RERLGSFGTVRQEGDTGIQGMTAQVTSPGGNVTDAEIVDSGNSTYRVRFVPVEMGSHTVN
VKYRGEHVPGSPFQFTVGPLGEGGSHKVRAGGTGLERAVARVPAEFSIWTREAGAGGLSI
AIEGPSKAEISFEDRKDGSCGVIYIVQEPGDYEVSIKFNNEHIPDSPFIVPVATLSDDAG
RLTVTSLQEKDLKVNQEASFAVQRNGARGVIDAKVHAPSGVVEECYVTELDSDKNAIRFI
PRENGVHSIDVKFNGSHIPGSPFRVRVGEAESVGDPGMVSAFGPGLEGGRTGVPSEFVVN
TCKAGSGALSVTIDGPSKVKMDCTECPEGYKVSYTPMAPGNYLICIKYGGPQHIVGSPFK
AKVTGMRLSGGHSLHETSSVIVETVTKTSKMAGAYSCLSSSQSTSDASKVVCHGAGLSKA
FVGQKNNFSVDCSKAGTNMLMVGVHGPRTPCEDVAVKHMGNKLYNVTYTVKEKGNYVVIV
KWGDETVPGSPFHVSTP
NT seq
8154 nt
NT seq
+upstream
nt +downstream
nt
atgagcaattacacacatttagacgatctgccgcctcaatactaccagggcacggacctt
ggggaagaggaagaggaagagatgccagcaactgagaaagatctggctgaggacgcgccg
tggaagaagatccagcagaacaccttcaccaggtggtgcaatgaacatctcaagtgcgtc
aataagagcctcactgacctccagaaagacctgggcgatgggctcaaactcatcgggctt
ctggaggtcctcagtcagaagaaaatgtatagaaagcataacgtcagaccaaacttcaga
caaatgaaactggagaacgtgtcggtggcgctggagtttctggacagagagcgaatcaaa
ttagtgtcaatagacagcaaagccattgtagatgggaacctgaaactgattctgggtctc
atatggacactcattctccattattccatctccatgcccatgtgggatgatgaggatgat
gaagaggttaagaaactcactcccaaacaaagattgctgggctggattcagaacaaggtt
ccagagctgcctattaacaactttaacaaagactggagggatggcaaggcccttggtgcc
ctcgtggacaactgtgcccctggtctgtgccctgactggcaaaaatgggaccccagccag
cctgttgcaaatgctcgtgaggccatgcagcaggccgatgactggctcggtgtgccacag
gtgatagctccagaggaaattgtggatccagatgtggatgagcattcagtgatgacatac
ctctctcaatttcccaaagctaaactgaagcctggagcccctcttaagccaaagcagctg
taccccaaaaaagccaaggcctatggaccaggtattgagcctcaggggaacatggttttg
aagccagctctatttactgtagaaacactggaggctggacttggtgaagtgattgtatat
gtagaggacccagagggtcacactgaggaggctaaagttgtcgccaacaatgacaagaaa
aggacattctctgtcacttatgtgcccaaggttgagggaccccacaaggtgaaggtactc
tttgctggtcaggacattgataagagccccttcatggtgaatgtggcgaaggctctgggg
gatcccagcaaagttcaggctcgaggaccaggtcttgaggcagttggcaatatggcccat
aaacctacttattttgacatctatactgcaggtgctggggctggagatgttagtgtggtc
attgttgaccctcagaataaaaacaacactgtggaagttattctagaaaacaagggtgat
aacatcttccgttgcacctacaaacctcttcaggaggggccgcacaccatccatgtgacc
tttgctgggcagcccatacccaacagcccctttaaagtgaacatctctgaggcacaccct
aaaccttctgctgtgcctccgaagcagataccccctcataaaaagaaagccagcaatgct
aatgcctgtcgtgcaactggccggggactgcagcctaagggcgttcgggttaaggaggtg
gcggatttcacagtttttaccaaaggagcaggaagtggagagttgaaggtctctgtaaaa
gggcctggaggagtagaggtgcctgtgaaagtacttgatgttggtgatggagagttcaag
tgtgattattgccctgttaagcctggaaaatataatgtaaacatcacatggggaggccaa
cctatcccacgcagcccatttgaagtggaagtcagcaaggaagctggaccacaaaaagtg
cgggcttggggtcctggcttgaagactggaatggttggaaagtcagctgactttgttgtt
gaggccattggaacagaagtaggaactctaggcttttcaattgagggcccttctcaagca
aagatagagtgtgatgataaaggtgacggttcctgtgatgtgcgttactggcccaccgaa
cccggagattatgcagttcatgtcatctgtgatgatgaagatatcaaagacagccctttc
atggcccatatccttccagcagctaatgatgtcttccctgagaaggtcaaagcgtttggg
ccaggcctggagcccaccggaattattgtcaacaaatcaacacaattcactgtagatgct
cgagaagctggcaaaggcagtctgaagatctatgctcaggatgctgagggctgtgtgatt
gacattcaaattactgataagggagatggcacttttgtttgtatgtatgttcctaccaag
ccggtgaagcacaccatcatattaacctggggggaggtcaacgtacccaagagtcccttc
agagttcttgttggtgaaggctgtcaccctgacaaagtgaaggtctatgggcctggagtt
gagaaaactggcctaaaggcagatgagcccacctacttcactgttgactgcagtaaagct
ggccaaggtgatattagcattggcatcaaatgtgccccaggtgtggtgggtccagcggag
gcagatatagattttgacatcattaaaaatgacaacgacaccttcactgtaaagtacaca
ccccctggccctggccgttacacaatcatggtgctttttgcagatcaggaaatccccagc
agcccattcaaagtcaaggtggatccgtctcatgatgctggtaaagtcagagctgaaggt
cctggactgaacaagacaggcattcaagtggatattccaacccatttcaccatcttcaca
aagggagcaggaaaggcaaaaccagaggtgcagttcaaaactgcttttaaaggaaacgct
gttaaagattttgagatcattgataatcatgattactcctacactgtgaagtacactgca
cttcatcagggtgagatggctatcatggtcacacatggtggagatcccgttcccaaaagc
cctttcaatatcacagttgccccttcactcgatcttggcaaagtcaaagttgaaggcctt
aatgaaaaagtggaagttggaaaggaccaagagtttattgttagcactaaaggggcaggt
ggacagggtatggtacaagtgagcataacctcaccctctggtagaccaataccttgtaag
ttggaatcagacaagacaaaagaggccacttgtgtgaaatacatcccacccgaggagggt
cattacaaagtggacatcagctatgatgggaaccctgttccaagaagtcccttttctgtg
gagggactcatgcctgccgatccttccaaagttcgtgcctatggaccaggacttaagggt
ggtattgtgggtcagcctgcaccgttcactatagacacaaaaggggcaggtgctggtggt
ctgggtctaacattggaaggcccctgtgaggctaagattgagtgccaagacaacggtgat
ggaacctgctctgtattctacttgcccacagaggctggtgactacaacatcaatatccta
tttggggaagctcatatccctggctctccttttaaagctgctgtcaagccagctctggat
gctggcaaggttatagtgagtggaccaggattagagagggctaaagctggtgaggtggcc
agtttcacagtggactgcagtagagccggagaggctgaactcaccattgagattgtgtca
gattcaggggctcaagctgaagtttgtattaaaaagaacagtgatggaacattctctgtc
acctacaccccactctttcatgggacacacaccatcacaattaaatatggaggtcagcag
gtgcccaagagccccatacatgttcaggtggagccgtcagtggacacgagtgggattaaa
gtgtatggaccaggagtcgagccaagaggggtcctcagggaagtgacaacacacttcatt
gtggatacccgggcccagactaagaccaaaggagggaatcatgttaagattcgcatcatc
aatccatcaggcgctaacacagatgcatatattactgataagggcgacggcacatataga
gtggaatatactgcttttgaggatggtttgcacctgatcgaggtattttatgatgaagtt
gctgttcctaagagcccctttaaggtgtcagttgtagaaggttgtgacccaacacgtgtt
cgagcttatggtccaggcctggaaggtgggctagttaacaaacccaactgcttcacagtg
gagacaaggggtgctgggacaggtggtttgggtttaaccattgaaggagcatcagaatcc
aaaatgttctgtaaggacaacaaagatggtagttgcagtgttgaatatatgcctttcact
gctggagactatgatgtcaatatcacttatggaggccagcctattccaggcagtccattt
cgggtgctggttaaggatgtggtggatgtcagtaaggtgaagtgctcaggtcctggactt
gctaacagagttacagcacatgttccacaaaccttcactgtggacagtagcaaagcagga
ctggctcctctagaggtccagctgtatggaccaaaaggaacacttgagcctgttgttgtt
aaaaacaacagagatggaacgcataccgtcaactacacccctgcacaggaggggccgcac
acagtgtctgtcaaatacgccaaccaagaagtacctggcagtccattcaaagtcaattca
gccccctcacacgatgccagtaaggtgcgggctagcggacctggtctggacactaaagga
gttgctgccagtctaccagtggagtttaccattgatgctcgtgatgcagggaaaggcctt
ctgacagttcaaatccttgatccagagggaaagccgaaaaaagccagcattcaagacaac
agagatggaacttacactgtatcttatgtgccagatatgactggccgatacaccataacc
attaagtatggtggagataacattccatactcaccttacaatatccaagctttaccaact
ggtgatgccagcaagtgtctgctgacagtgtctattggaggacatggtgttgaaagtctt
gggcccaatattaagatggcagaagagacattcatcactgtggatgccaaggctgctgga
aaagggaaggtgacatgtacagttctgaccccaaatggcattgagctggatatggatgtt
acagaaaatccagatggcacctttgacatatattatactgcacccgagccgggaaaatat
gtcatcacaatccgcttcggagggcaacatattcccaaaagcccttttcaagtcatggct
accgatcagcctgttgcaccgagagatgacacaaaacccatgtttcaacccctcaacttg
gttatcccattcactgtccagcaaggagagctcagtggggaggtgcgtatgccctctggt
aagacagctcgtcccttcatcagggacaacaaagatggaacagtcacagtgcaatttcag
cctacagagagaggcctgcatgaaatggacataaagtatgatggcaaccacatcccagga
agtcctttgcagttctatgtagatgtaatgaacagtgggatggtgacagcctatggacct
ggtttgtgtcatgggataatcaataaactggccacttttacggttgttaccaagaatgct
ggacaaggtggtttgtcccttgctgtagagggtccatctaaagctgaaatcagttgtaag
gacaataaagatggtacgtgcactgtgtcctacttgcccactgcaccgggtgattacaac
atcattgtcaagtttgacaacagccatattcctggcagccccttcactgcaaaaattact
ggtgatgattcactccgaaggtctcagatgaacgttggcacagcggcagatgtctcactg
aagatcacagaaacagacctgagctatctgacagctagcatcaaagctccatcaggaaag
gacgaaccttgcctactgaagaggttgcccaaccagcacattggtctctccttcacccca
aaggaagtgggggagcatgaggtcagcgtgaggaagagtgggacacatgtgaacaacagc
ccttttaagattatggttggaccaactgaaattggagaggccagcagagtcaaggctttt
ggtaaaggtttggttgaagctcatacctttgaagtggcagagttctttgtggacaccaga
aatgctggatatggaggtcttggattgtcaatcgagggtccaagtaaagtggatatcaat
tgtgaggatgtggaagatggaacatgtaaagtgacatattgccccactgaaccaggcaac
tacatcatcaacatcaagtttgcagacaaacatataccaggaagtccttttacagtgaag
ataacaggagaaggaaggatgaaggagagtataacaaggaaaaggcaagctgcctctatt
gcttcagtgggcagcgcatgtgacctaaaccttaaaattccaggaaattggtttcagatg
atgtcagcacaggagcgcttaactcgtaccttcacacgcagtagccacacttacacacgt
acagaacgcaccgaaatcagcaagtcacatgctggtgagactaagcgggaagtacacgta
gaagagagcacagagcttggcggcgaccctttcagagatgtatttgggtccttcctggga
agagaacgattgggaagctttggtacagttcgacaagagggtgacacagggatccaggga
atgacagcccaggtgaccagccctggtggaaatgtaacagatgcagagattgttgatagc
gggaacagtacctacagagtccgcttcgtacctgtcgaaatgggttctcacactgtcaac
gtcaaatacaggggtgagcatgtccctggaagccccttccagtttacagtcgggcctctc
ggagaaggaggttcccacaaggtccgggctggaggcacaggtctagagagagctgttgca
agagttcctgctgaattcagtatttggacaagagaggctggagcaggcggtctgtctatt
gctatagaggggccaagcaaggctgaaatctcctttgaagacagaaaagatggatcctgt
ggtgttatttacattgtgcaagagccaggtgactatgaagtttccatcaagttcaataat
gaacatatcccagatagccccttcattgttcctgttgccacattgtctgatgatgcaggt
cgacttactgttacaagccttcaggagaaggatttgaaggttaatcaggaagcctcattc
gcggttcagaggaatggggcgagaggtgtcatagatgctaaagtacatgccccctctggt
gtagtagaggagtgttatgtcactgaattggatagcgacaagaatgcaattcgcttcatt
ccacgtgagaatggtgttcattcaattgatgtgaagttcaatggaagccatatcccaggt
agcccattcagagtccgtgttggagaagcagaatctgttggagatccaggaatggtgtct
gcctttggtccaggacttgagggtggacgcacaggggttccctccgagtttgtcgtcaac
acatgcaaggcaggatcaggtgccttatcggttactattgatggtccctcaaaggtcaaa
atggactgcactgagtgcccagaaggttacaaagtgtcttatactcctatggcaccaggc
aactatcttatatgcattaaatatggtggcccacagcatattgttggcagtcccttcaaa
gcaaaggttacaggtatgcgtttgtctgggggccacagtttgcatgaaacttcatcagtc
attgtggaaactgttaccaaaacctctaagatggccggagcttacagttgtctgtccagc
tcacagtcaacttcagatgccagtaaggttgtatgtcatggtgctggcctctccaaagcc
tttgtgggccagaagaacaatttttccgttgactgtagtaaagcaggtacaaacatgtta
atggttggtgtccatggtcccagaactccatgtgaagatgtggctgttaaacatatggga
aacaagctttacaatgtaacctacacagtgaaggagaaaggaaactatgtagttattgtt
aaatggggggatgaaactgtaccaggaagtcccttccatgtgagcactccctaa
DBGET
integrated database retrieval system
