Rhinichthys klamathensis goyatoka (western speckled dace): 130080628
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Entry
130080628 CDS
T09701
Symbol
rfng
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase radical fringe
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg00514
Other types of O-glycan biosynthesis
rkg04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
130080628 (rfng)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
130080628 (rfng)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
rkg01003
]
130080628 (rfng)
Enzymes [BR:
rkg01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
130080628 (rfng)
Glycosyltransferases [BR:
rkg01003
]
Glycan extension
O-Glycan
130080628 (rfng)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fringe
Motif
Other DBs
NCBI-GeneID:
130080628
NCBI-ProteinID:
XP_056102045
LinkDB
All DBs
Position
Unknown
AA seq
378 aa
AA seq
DB search
MHLSHVGTNKICFLLSLAFCALLVLLIPSLQPAQRQADLPQPRPPAKPPRAGRRHDLYGN
PGQGSRDAKDGSFIHPLPPGGRLWDPQTMLEGDTAHANSPGSRSKDSLDLRDIFIAVKTT
RKYHKSRLQLLSQTWVSKAKEQTFIFTDGEDKELRQKAGLNIINTNCSAAHTRQALCCKM
SVEYDKFIESQKKWFCHVDDDNYVILPSLLELLSSYSHTQDVYLGRPSLDHPIEAAERVK
SDGSVSVKFWFATGGAGFCISRGLALKMSPWASLGNFITTAEKIRLPDDCTVGYIIEALL
EVPLTHTGLFHSHLENLQRLPTDSILKQVTLSYGGFENRRNVVSVGGVFSLAEDPSRFKS
IHCLLYPDTEWCPRKTRH
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgcacttatcccatgtcggcaccaacaaaatctgcttcctgctttccctggcattttgt
gccctactggtgctccttattccctccttacaacctgcacagcgtcaggcggatctgccc
caaccgcgaccccctgccaagccccccagagccggacgcagacacgacctctacgggaac
cctggccaaggaagtcgtgatgccaaggatggtagtttcattcacccacttcctcccgga
ggccgactctgggacccacagacgatgttagagggggacactgcacacgctaactcccct
gggtcacgttccaaagactcattggatttgagagacatttttattgccgttaagaccacc
aggaagtatcacaagtccagactgcagctcctgtctcagacctgggtgtccaaagccaag
gaacagacgtttatcttcactgatggggaggataaggagctcaggcagaaagcagggctc
aacatcatcaacaccaactgctctgcggcgcacacgcgtcaagccctgtgctgcaagatg
tctgtggagtatgacaagttcatcgagtcacaaaaaaagtggttctgtcacgtggatgat
gataactatgtgatcctgcccagtttgctggagctgctgtcgtcctactctcacacacaa
gatgtgtatctgggccgacccagtctggaccaccccatagaggccgccgagagggtcaag
agcgacggatcggtgtcagtgaagttctggttcgccactggaggagctggattctgcatc
agccgaggcttagcgctcaaaatgagtccatgggcaagtcttggaaacttcatcacaact
gcagagaagatccgcctcccggacgactgtacagtaggttacatcatcgaggcgttgctg
gaagttcctctgacacacacaggcctgttccactcacacctggagaatctccagagactc
cctacagacagcatactcaaacaggtgaccctcagttatggtggattcgagaacaggagg
aatgtggtcagtgttgggggagtgttctcattggctgaagacccttcacggtttaaaagc
attcactgcctgctctacccagacaccgagtggtgtccacgcaagactcgtcactga
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