KEGG   Rhinichthys klamathensis goyatoka (western speckled dace): 130082905
Entry
130082905         CDS       T09701                                 
Symbol
kdm6bb
Name
(RefSeq) lysine (K)-specific demethylase 6B, b isoform X1
  KO
K11448  lysine-specific demethylase 6B [EC:1.14.11.68]
Organism
rkg  Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:rkg00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:rkg03036]
    130082905 (kdm6bb)
Enzymes [BR:rkg01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.68  [histone H3]-trimethyl-L-lysine27 demethylase
     130082905 (kdm6bb)
Chromosome and associated proteins [BR:rkg03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    130082905 (kdm6bb)
SSDB
Motif
Pfam: JmjC KDM6_C-hel KDM6_GATAL
Other DBs
NCBI-GeneID: 130082905
NCBI-ProteinID: XP_056103793
LinkDB
Position
Unknown
AA seq 1703 aa
MYHIADQYSGRNSWDSFPSSGPNRAPWAPGSNRHWAPPSRCSGGNYQSPSQNYTAGRNYP
NKPYNNRPPGFSRDRPRDRGIGKEQRVPRGCGPTQNQHHNPERSTLNYNSGCGGHLSSSN
NHGSQPHRYGGPHQQQRSTGRPPQTQGEKWTQSTQSRTFHGPSLKRPAPPHNISPTLRDP
SPSREDCPSKRSRSISSHQNFHPRDKYFINRPPPSHPPRSWSPAYKSSMSWSLSEKRSSP
SRSQESSHSVMRDHIYRPYSLPSPPNIALSQGPHSKKPTKQGPPHHPVQDHPGPHPRGAK
GGWDCPSPANLTSVPYNQQHQLPPPQRHTGPSSSPVTSVPQPRFNTAQPGWKTQSRSGKH
GNSEMGRTTSSLESQKSEGGDRKRPSASKHISRQRSPIQPYCSAEGRVRDCTEWRNPETG
LRKHDQRDSNSPSEPTTQTSDRGLRAQRSEMKKSRHSKHQTEFKSIHKSSLSKLDTELLK
HIQAKRRHKDRLKRKERKEEGELLDTKERIEKKLEDRKKKKMREGRKGHDKKNIHQNGRK
LGQMKRRAKKERKQGMHKDRKSEMPTSKSASPNLGTLYPIDSGPLLDDLLSEPLHLSHRE
EEFSQHTSGFIPPCKSHVNNNHCSPCQSTHKANTKALEVDNQSDSSEPDHVDTSDDDSIE
TQDVGGYKPTLPDKQVCKEEPIRNKEGVPGLHSAPDLLPAHCTYSEELLRLDPPTSPPVL
SWQGSPVSDLSDDEEGKEEDMIGVLRRPVLQPSPTHSSPLRDSVEISTGVDYCHRDLAKL
YGISESSKSMDTEEEDEEKREGEQKDSSPNASRSPVPNKPHLHQMDTFKSTTSAMGSHRY
TYRGGPFGRPPPGSLVGVKYSSSLSLGPEIHPPDQHSPPATSPTTDIPDQVTPPQIQPTE
KDKESQTEEERVENEAKEEEIAGEKEETKVQKMYEQTETKVAESDKDLTCTSLEEKEPLM
SHATLQAKLVHSCELLLAQNSRPVSKAMKGSGPISTERENERDRVRHKDQVRSHRKVVKS
MKGQNREKREGGETKKKTVKKGIEIKDSCSKGSYEQLMEIRTKQVVPENQQIDMKDGESE
LKEVKREKETDVKKGTMKKDTVKVDTSSTASARTSTQTSVTVTLSDSPPILDRVNLLNLQ
ELSKIPLKELTIRLVKVESGSRQTFIASEIEQKSMPLNDINISNNADEVIRACKGANVNN
KFRESYLLPAFSVKPVLSSETPIPREKLNPPTPSIYLESKRDAFSPVLLQFCTDPKNAVT
VIRGLAGSLRLNLGLFSTKSLVEANSEHAVEVRTQVQQPADENWNHSGSAQTWPCESSRS
HTTIAKYAQYQASSFQESLQEEKDSEDEDEEDKSENKNVTKSNLQVNIGSSVTTASSEQK
TVGKIIKFGTNIDLSDPKRWKPQLQELLKLPAFMRVSSSTNMLSHVGHTILGMNTVQLYM
KVPGSRTPGHQENNNFSSVNINIGPGDCEWFAVHEHYWKAISDFCEKHGVDYLTGSWWPV
LEDLYRSNIPVYRFIQRPGDLVWINAGTVHWVQAVGWCNNIAWNVGPLNAYQYQLALERF
EWNEIKKVKSIVPMIHVSWNVARTIKVTDPNTFKMIKHCLLQSIKHIQILRDQLVSIGKK
ISYQSRVKDEPAYYCNECDVEVFNLLFVTSENSSRKTYVVHCEDCARERSPSLTGVVVLE
QYRVDELMNTYDSFILAPVPCCR
NT seq 5112 nt   +upstreamnt  +downstreamnt
atgtatcacatagcagaccagtattctggacgtaactcgtgggactccttcccctcttct
gggccgaatcgagcaccatgggccccaggcagcaaccggcactgggctcctccatccagg
tgcagcggagggaactatcaatccccatcccaaaactatacagcaggaagaaactaccca
aacaaaccttataacaacagacctccaggttttagcagggacagacccagagacagaggc
atcggaaaggagcagagggtcccgaggggctgcggaccaacacagaaccagcaccacaac
ccagaacgttccaccctaaattacaactcagggtgtggaggacacctctctagcagcaac
aatcacggcagccagccacacaggtatgggggtccgcaccagcagcagcgttccactggg
cgccccccacagacccagggagagaagtggacacagtcaactcagtccaggactttccat
gggccctctctcaaacgtccagcacctcctcacaatatctcaccaactctccgtgaccca
tccccttcacgggaggactgtcccagcaagaggagtagaagcatcagctcgcaccagaat
ttccacccgagagataaatatttcatcaaccgtccacctccatcacatccacctcggtcc
tggagcccagcatacaaaagctcaatgtcctggagcctgtctgagaagaggtcttccccc
tctcgctctcaggagtccagtcattctgtcatgagagatcacatctacagaccatattcc
cttccatcaccacccaacattgccctaagccaggggccccacagcaagaaacccaccaaa
caggggccaccccatcatccggtccaagatcatccaggcccccatccccgtggggccaaa
gggggctgggattgcccatcaccagcaaacctcaccagtgtgccttacaatcagcagcac
cagctccctccaccacagaggcacactggcccctccagcagcccagtcacctcagtacct
cagcccagattcaacacagcacagcccggctggaaaacacagagccgctcgggaaaacac
ggcaacagcgagatggggcgtaccacctctagcctggaatcccaaaagtctgagggtggg
gacagaaaacgtccaagtgcatccaaacacataagccgtcaacggagtcccattcagccg
tactgcagtgctgagggtagagtcagagattgcacagaatggaggaacccagagactggg
ttaaggaaacatgatcagagagactcaaattctccttctgagcccaccactcaaacctca
gacagaggtctgagggcacagaggtcagaaatgaagaagagcagacactctaaacaccag
actgaattcaaatccatccacaagagctccctcagcaagctggacactgaactattgaaa
cacattcaggccaagaggaggcacaaagatcgtttaaagaggaaggagagaaaggaagaa
ggagagctgttagacacaaaggaaaggatagagaaaaaactggaggacaggaaaaagaaa
aagatgagggaaggaagaaaaggacatgataagaaaaacatacatcaaaatgggaggaag
ttgggacagatgaaaagaagagcaaaaaaggagagaaaacaaggaatgcataaagacagg
aagagtgagatgcccacttcgaagtcagcatctcccaatttaggaacattgtatcccatt
gattctggacctctcctggatgacctactgtctgagccacttcatctcagtcacagagag
gaagagttctctcaacatacgtcagggtttatcccaccctgtaaatctcatgtcaataat
aaccattgttctccatgccagtcaacccacaaagccaatactaaagccttagaggttgac
aaccaatcagactcttctgagcctgaccatgtagacactagcgatgatgacagtatagag
acccaagatgttggtgggtacaaacctactcttcctgataagcaggtttgcaaagaagaa
cccattagaaacaaggagggtgtcccagggttgcatagtgccccagaccttctcccggct
cactgcacctatagcgaggagctccttaggttggacccaccaacaagcccacctgttctg
agctggcagggctctccagtgtcggacttgagtgatgatgaagaagggaaagaggaagat
atgattggagttctgagaaggccagtgctacaacctagtccaacacactcatctccactt
agagactcagtggagatcagcactggagttgactattgccacagggatttggccaagttg
tatggcatttctgagtcctctaaatccatggacactgaggaagaggatgaagaaaagaga
gaaggagagcagaaagatagtagtcctaatgcctcaagaagccctgtgcccaacaaaccg
cacttgcaccaaatggacacgttcaaatcaacaacctcagcaatgggcagccatagatac
acttacaggggtggaccatttggtcggcctcccccaggttctttagttggggtgaaatac
tcatcatctctgtccttgggtcccgagatccaccctccagaccagcatagtccacctgcc
acatctccaacaacagatatcccagatcaggtcacaccaccacagatccagcccacagag
aaggataaagagagtcaaacggaggaagaaagagtggaaaatgaagcaaaagaggaagaa
attgcaggagaaaaagaggaaactaaggtgcagaagatgtatgaacaaacagagaccaaa
gtagctgaatcagataaagacttaacctgcacatccctggaggagaaggaacctctgatg
tctcatgccaccctgcaggcaaaattagttcacagctgtgagctactactcgctcagaac
tcgaggcccgtgtcaaaggccatgaaaggcagcggccccatttctactgagagagaaaat
gaacgagacagggtcagacacaaagatcaagtgaggtctcatagaaaagttgttaagagc
atgaaaggacaaaatcgtgaaaagagggagggaggagagactaaaaagaaaacggtgaag
aaagggattgagataaaggattcctgctctaaaggttcatatgagcaactaatggaaatc
aggaccaaacaggttgtcccagaaaaccaacaaattgacatgaaagatggagaatcagaa
ctcaaagaagtcaagagagaaaaagagacagatgttaaaaaagggactatgaaaaaagac
acagtaaaggttgacacatcctccacagcatctgccagaaccagcacacaaacctctgtt
actgtgactctctccgacagccctccaattctagaccgggtcaatctcctaaatctgcag
gagttgtctaaaattcccttgaaagaactgacgatccgtttggtcaaggttgagagcgga
agtcggcagacttttatcgcctcagagatcgagcagaagagcatgccactcaatgacatc
aacatcagtaataacgcagatgaggtcattcgagcctgcaaaggggcaaatgtcaacaat
aagtttcgggagtcgtacctgctcccagcgttttcagtgaagcctgtcctgtccagcgag
actcctattcccagagagaaattgaaccctccaaccccaagcatttatctggagagtaaa
agggacgctttctctcccgtgctgctgcagttctgcacagaccctaaaaatgctgtcact
gtcatcagaggactggctggatccctccgtctcaacctgggtctgttctccactaaatcc
ctagtggaggccaactccgagcatgcagtggaggtgaggactcaggtgcagcagccggcg
gacgagaactggaaccattcaggatccgctcagacctggccctgtgaaagtagcagatct
cacacaaccattgctaaatatgcacagtaccaagcatccagtttccaggagagcttacag
gaagagaaagacagtgaagatgaagatgaggaagacaaatcggaaaacaaaaatgtgaca
aaatccaacttacaagtcaacattgggtcttctgtcaccacagccagctcagagcagaag
actgttggaaaaatcatcaaatttgggaccaacattgacttatctgacccaaaacggtgg
aagccccagctgcaggagctgttgaagttgcctgcgttcatgcgagtgtcgtccagtacc
aacatgctgagtcacgttggtcacactatactgggtatgaacacagtccagctttatatg
aaggtccctggcagccgcacaccaggacatcaggaaaataataacttctcttcagtgaac
atcaatattggccctggagactgtgagtggtttgctgttcatgaacactactggaaagcc
atcagtgacttctgtgaaaagcatggcgtggactatctgacaggctcatggtggccagtt
ctggaggacctgtaccgttcaaacatccctgtgtaccgcttcattcagagaccaggtgac
cttgtgtggatcaacgctggcactgtgcattgggtccaggccgtggggtggtgcaacaac
atcgcctggaacgtgggccctttaaacgcctatcaataccagctggctcttgagcgcttt
gagtggaacgagatcaagaaagtcaaatcgatcgtccctatgatccacgtgtcctggaat
gttgcccgcacaatcaaggtcacagacccaaacacattcaagatgatcaaacattgtctc
ctccagtccatcaaacacattcagattttgagggaccagctggtgtctatagggaagaag
atctcctatcagagcagagtgaaggatgagccagcgtattactgcaacgagtgtgatgtg
gaggtgtttaacctgctgtttgtgaccagtgagaacagcagtaggaagacgtatgtggtt
cactgtgaggactgcgcccgggagaggagccccagtctgaccggggtggtggtgctagag
cagtaccgcgtcgatgagctgatgaacacatatgatagcttcatcctggctccagttccg
tgctgtaggtga

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