Rhinichthys klamathensis goyatoka (western speckled dace): 130082929
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Entry
130082929 CDS
T09701
Name
(RefSeq) protocadherin gamma-C5-like
KO
K16497
protocadherin gamma subfamily C
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
rkg04515
]
130082929
Cell adhesion molecules [BR:
rkg04515
]
Cadherins
Protocadherins
130082929
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
BppU_N
Motif
Other DBs
NCBI-GeneID:
130082929
NCBI-ProteinID:
XP_056103844
LinkDB
All DBs
Position
Unknown
AA seq
819 aa
AA seq
DB search
MRTQIQRRILFWRVLWLLCFAVLWSETDAQLRYTIPEELKEGSIVGNVAKDLGLDVSEIS
NRKLRIASESGKQYFSLNLRNGELLVNEVIDRETLCGQSASCVLPLQVIIEDPLQFYRVE
VDIQDINDNSPIFLSEINTIEVPESTLTGARFRLEPAQDPDVGTNSLRTYALNKNEHFVM
HIKNEKDGTKVPEIVLEKFVDREKNAVHHLILTGIDGGDPVRSGTTQITVKILDANDNAP
IFEHDLYEVKVMESTVPGTMILTVKAIDLDDGINGEVEYSFAAHTPEIIQNVFAINPVTG
ELVVSKNLDYEISTSYKIDIRARDKGSLAMEEHCSVQVNVLDVNDNAPEITITSSPKPVR
EDAPAGTMVALINVKDLDSGVNGNVTLSMSPGTPFKLKPTFLNHYALVTESQLDREHFPR
YDIELKASDSGSPPLVSSKLITVNILDVNDNPPVFSERVYSVYIKENSAPGSILASVTAS
DLDTGENAKIVYSVLDTNARDVPVSSYVYINSENGSIFSMHSFDYEKIKVFHMIVLAKDH
GSPSLSSNATVHVFILDRNDNAPAVIYPSTSMGSVPHQRMPRSAKAGHLVTKVTAVDADS
GHNAWLFYRLAEATDASLFSVNLHTGEVRTKRAVSEQDDSSQRLMIEIKDNGEPIQSTTI
TVDILIEDGFHEPISDYREKTIEPNKKSGKITLYLIISLGTVSILSVLTLFTLIVKCVRS
SIGSPSCCIRRTDSGYKNPNRNLQIQLNTDGPIKYVEVLGGDMMSQSQSFGSYLSPMSEF
SDLTLVKPSSTTNFTDTLNVLDASLPDSAWTFESQQVSA
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atgaggactcaaatacaaaggagaattttgttctggcgggtgctgtggctgttgtgtttc
gctgttttgtggagcgagacagacgcacagcttcgttatacaataccggaggagctgaag
gagggatccattgttggaaatgtagctaaagatctcggtttggatgtatctgaaatatct
aatcgtaaattacggatagcatctgagtctggtaagcaatatttcagtctgaatttgcgg
aatggcgagctgctggttaatgaagtaatagacagagaaaccctgtgcggacaaagcgcg
agctgtgtgttaccattacaagtcataatcgaggatccactccagttttatcgagtcgag
gtggacattcaagatattaacgacaactcaccaatattcttgtcggaaataaacacaatt
gaggtaccagagtcaacgttaactggagcgaggtttcgtttggaacctgctcaagatcct
gacgttggaacgaactccttgcgcacatacgcgcttaataaaaatgaacattttgttatg
cacataaaaaacgaaaaagacggaacaaaagtcccagaaatagttttagagaaatttgta
gatagagaaaaaaatgctgtgcaccatctcattttgacaggtattgatggaggtgatcca
gtgaggtcagggaccacccagattactgtaaaaattcttgacgcaaatgataatgcccca
atatttgaacacgacttatatgaggttaaagtaatggagagcacagtcccgggaacaatg
atacttacagtaaaagctattgacttggatgatggtataaacggcgaggttgagtattcc
tttgcggcacatacacctgaaataattcaaaatgtgtttgctattaatcctgtgacaggc
gaattagtcgtttctaagaatcttgattatgaaatcagcacctcatataaaattgacata
cgcgcaagagacaaagggtcacttgcaatggaggaacattgttcagtccaggtgaatgtt
ttagatgtgaatgataatgcacctgagatcaccatcacctcctcacccaaacctgtgcga
gaagatgcgcccgctgggactatggtagcattaataaatgttaaagatttagattcaggc
gtaaacggaaacgtaacacttagcatgtcaccaggcaccccttttaaattaaagccaaca
tttttaaaccattacgcactagtgacagaatcacagttagatcgagaacattttcctaga
tatgatattgagcttaaagcgtcagactctggatcacctccactggtatctagcaaactc
attacagtaaatatattagatgtcaatgataatcctcctgttttctctgaacgcgtgtac
tcggtttatattaaagaaaacagtgccccgggatcaattttagcatcagtgacagcatca
gatctggatacgggagaaaatgccaaaattgtctattcagttctcgacactaatgctcga
gacgtacctgtctcttcatatgtatacataaactcagaaaatggtagtatatttagcatg
cactcttttgactatgagaaaattaaggtctttcatatgatcgtgcttgccaaagatcat
ggctctccatctctgagcagtaacgccactgttcatgtgtttattctggaccgaaacgat
aacgctcctgctgtcatttacccatccacatccatggggtctgtcccgcatcagaggatg
ccccgttctgctaaagcaggacatctcgtcactaaggtaacagcagtggacgcggactcg
ggtcataacgcctggctcttctacaggctcgcggaggcgacggacgcgtcactgttcagt
gtgaatttacacacgggagaggtgaggactaaacgcgctgtttcagagcaggatgactcc
tctcagagactgatgatagagataaaggataatggagaaccgatccagtccaccacaatc
acagtggatatactgatagaggacgggtttcatgaacccatttcagactatagagagaaa
actatcgagcccaacaagaaaagcggcaaaataactttatatttgatcatctctttaggc
accgtgtcaattctatctgtattgacattgttcacgttgattgtgaagtgcgttagaagt
agcatcggaagtccaagctgctgtatcaggcgaactgattctggatacaagaaccccaac
agaaacctacagatccagctcaacactgacgggcccattaagtatgtggaggttctggga
ggagacatgatgtctcagagtcagtcctttggctcctatctctctccaatgtcagaattc
agtgatctcaccctcgttaagcccagcagcaccacaaactttacagacacgctaaacgtg
cttgatgcgtcattaccagacagcgcgtggacgttcgagagccaacaggtgagcgcgtga
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