Rhinichthys klamathensis goyatoka (western speckled dace): 130084616
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Entry
130084616 CDS
T09701
Symbol
dse
Name
(RefSeq) dermatan-sulfate epimerase
KO
K01794
chondroitin-glucuronate 5-epimerase [EC:
5.1.3.19
]
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
rkg01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
130084616 (dse)
Enzymes [BR:
rkg01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.19 chondroitin-glucuronate 5-epimerase
130084616 (dse)
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4962
Motif
Other DBs
NCBI-GeneID:
130084616
NCBI-ProteinID:
XP_056105998
LinkDB
All DBs
Position
Unknown
AA seq
951 aa
AA seq
DB search
MRTYTRGAPTVFFISALWILASPALAQVDPSGGIAFLGGNYEGTHPMLYFGQAEVEELQR
AAVGTHKALARQIREAGEAILERPEEYLPPWSPAEFSARWNEVYGNNLGLLSMFCMLYPH
RAGALDVAKEYMERMAVQPNWMVKDAPWDEVPIAHSLVGFATAYDFLYEYLSKVQQERFL
QVIGNASRYMYEKSYHRGWGFQYLHNHQPTNCVALLTGSLVVMNQGYLQEAYLWTKQALS
IMEKSMVLLQDVTDGSLYEGVAYGTYTTRSLFQYMYLVQRHFDIGHFSHPWLHKHFAFLY
RTLLPGFQRTVAIADSNYNWFYGPESQLVFLDRYVMRNGSGNWLAEVIRQNRVLEGPGQA
GKGQRWCTLHTEFLWYDASLQPTPPPDYGTSRLHYFEDWGVVTYGSALPAGRNHTFLSFK
SGKLGGRAIFDIVHQNKYKDWIKGWRNFNAGHEHPDQNSFTFAPNGVPFITEALYGPKYT
SLNNAVMFGPAVSESCFAPWEGQVTEVCNSKWLKYKHGQAADCQGQVEAALERQGMVFVR
GEGHAAYNPELKIKNFQRNLLLLHPELLLVVDHIQLHLGSSTHSMSAFFHNTDLPFQKTQ
VDGVHGALIRHGNETSKMFWLDDTGGSEQAIVGYRSYPRGYPYNGSNYVNVTLPLRYPIS
RVAYVFFGSGVDVQSFSVHGDSERLDIYLATRDHTYNICLLTGEVPAKPLAVVFMDQKKV
EFERTTGVHVHPVEEVEEYVNVVEDNLQHVKPVFQQLERHILSRVLNTDRFHKTAERLLE
SSDKRKAPGTIEKMFSLSKKQGKGKGGKKASLSDSLPDIFAQIEASEKKERQRTMKRVYE
ELPEEADGDSRAFIDYSDLRKGRKVGFVKGRKFKEVRVGATAESDDVFSTTSYIRLFLIL
NIATFFALLAVLLTRFQRAQSLHTQRCLYCILLIDSFILVWLYSSCSQTQC
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atgagaacttacacccgtggtgcaccaacagtgttctttataagtgcactgtggattctg
gcatccccggctctggctcaagtggaccccagcggaggaattgccttccttggagggaac
tacgagggaactcaccccatgctgtacttcggccaggcggaggttgaggagctgcagcgg
gcggcagtggggacgcacaaggctttagcccgacagatccgggaggctggggaggccata
ctggagcgaccggaggagtacctgcccccctggagccctgctgagtttagtgcccgctgg
aatgaagtgtatgggaacaacttaggcctgctctctatgttctgcatgctgtacccgcac
cgtgccggtgcgctggatgtagccaaggaatacatggagcgcatggctgtgcagcccaac
tggatggtgaaagatgctccgtgggatgaggttcctatagcgcactccctggttggcttc
gctacggcatacgacttcctatacgagtaccttagtaaagttcagcaggagcgtttcctg
caggtgatcgggaacgcttcgcgctacatgtatgagaagtcttaccaccgcggctggggc
tttcagtacctccacaaccaccagcccaccaattgtgttgctcttttgactggcagtctt
gtggtcatgaaccaaggatacctccaggaggcgtacctctggacaaaacaggctctttcc
atcatggaaaagtccatggtgcttctccaagatgtgacggatggttctctgtacgagggt
gtggcctatgggacgtacaccactcgttcactctttcagtacatgtatttggtccagagg
cactttgacatcggccacttcagtcatccctggctgcacaaacactttgcctttctctac
aggacattgttacctggttttcagagaaccgttgcaattgcagattccaactataactgg
ttctatgggccagagagtcagctggtgtttttggatcggtacgtcatgcgaaatggcagc
gggaattggctggctgaggtgatcagacagaatcgtgttctggagggcccgggacaggcg
gggaagggtcagcgctggtgcacactgcacactgagttcctctggtatgacgccagtctg
caacccacccctcctcctgattatggtacatcccggctgcattatttcgaagactgggga
gtggtgacctatggaagtgcccttcctgctgggagaaaccacacatttctgtcctttaag
tcggggaagcttggcggacgtgctattttcgacattgttcaccaaaacaaatacaaagac
tggatcaaagggtggcgaaactttaatgcgggccatgagcacccggaccagaactccttt
acctttgctcccaatggagtcccgtttatcacagaggctttgtatggacccaaatacacc
tctctcaacaatgccgtcatgttcgggcctgccgtgtctgagagctgctttgcaccatgg
gaaggccaagtcactgaggtttgcaactcaaaatggctgaagtataagcacggtcaggca
gcagactgccaaggtcaggtggaggcggctctggagcggcagggcatggtgtttgttcgc
ggggagggtcatgcagcttacaaccctgagctgaagatcaagaactttcagaggaacttg
ctcctgcttcatcctgagcttctgttggtggtggaccacattcagctgcatttaggcagc
tccacacacagcatgagcgccttcttccacaacactgacctgcccttccagaaaacccaa
gtcgatggagtccacggtgctctgatcagacacggaaatgaaacgtccaagatgttctgg
ttggacgatacgggcggcagtgagcaggcaatagtgggatataggagctacccccgggga
tacccgtataatggttcaaactatgtgaatgtgactttgccactgaggtacccgatcagc
agagtggcctacgtcttcttcgggtccggagtggatgtgcagagtttcagcgtgcatgga
gactcagagagactagacatctatctggccaccagggatcacacctacaacatctgtctg
ctcacaggtgaggttcccgccaaacccttggccgtggtgttcatggaccaaaagaaagtg
gagtttgaaaggacaacaggggtacatgtgcatcccgtggaggaagtagaggagtacgtt
aatgttgtggaggacaatcttcagcatgtcaaaccagtcttccaacagctggaaaggcac
attctttcacgggttcttaacacggaccgtttccacaaaactgctgagcgcctcctggag
tcctcagacaagaggaaggccccagggactattgagaagatgttttccctttctaagaag
caggggaaggggaagggaggcaagaaggcaagcctttctgacagccttccagacatcttt
gctcagattgaggcgagtgagaagaaggagaggcagcggacgatgaagcgcgtctatgag
gagcttccagaggaggcggacggggactcaagggctttcattgattacagtgatttacga
aagggcagaaaagtgggcttcgtaaagggccggaaattcaaagaagtgcgggtgggggcc
acggcagagagtgatgatgtgtttagcaccacctcgtacattcgccttttcctcattttg
aatatagccactttctttgccctgctggccgtgctgttgacgcgcttccagagggcgcag
agtttgcacacgcagagatgcctttactgcatcctcctcatagacagcttcatcctggtc
tggctgtactcctcctgctctcaaacacagtgctga
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