KEGG   Rhinichthys klamathensis goyatoka (western speckled dace): 130084787
Entry
130084787         CDS       T09701                                 
Symbol
ran
Name
(RefSeq) GTP-binding nuclear protein Ran
  KO
K07936  GTP-binding nuclear protein Ran
Organism
rkg  Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg03008  Ribosome biogenesis in eukaryotes
rkg03013  Nucleocytoplasmic transport
rkg03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:rkg00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    130084787 (ran)
   03008 Ribosome biogenesis in eukaryotes
    130084787 (ran)
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    130084787 (ran)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rkg03019]
    130084787 (ran)
   03009 Ribosome biogenesis [BR:rkg03009]
    130084787 (ran)
   03016 Transfer RNA biogenesis [BR:rkg03016]
    130084787 (ran)
   03036 Chromosome and associated proteins [BR:rkg03036]
    130084787 (ran)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rkg04147]
    130084787 (ran)
   04031 GTP-binding proteins [BR:rkg04031]
    130084787 (ran)
Messenger RNA biogenesis [BR:rkg03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     130084787 (ran)
Ribosome biogenesis [BR:rkg03009]
 Eukaryotic type
  Pre-40S particles
   Export and cytoplasmic maturation factors
    130084787 (ran)
  Pre-60S particles
    130084787 (ran)
Transfer RNA biogenesis [BR:rkg03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    130084787 (ran)
Chromosome and associated proteins [BR:rkg03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     130084787 (ran)
   Spindle formation proteins
    130084787 (ran)
Exosome [BR:rkg04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   130084787 (ran)
GTP-binding proteins [BR:rkg04031]
 Small (monomeric) G-proteins
  Ran Family
   Ran
    130084787 (ran)
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU MMR_HSR1 G-alpha RNA_helicase AAA_24 Gtr1_RagA Pox_A32 ArgoMid AAA_7 Septin TsaE AAA_16 AAA_22 DUF5906 SRPRB AAA_33
Other DBs
NCBI-GeneID: 130084787
NCBI-ProteinID: XP_056106240
LinkDB
Position
Unknown
AA seq 215 aa
MAENEPQVQFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGAIKY
NVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDLVRVCENIPIVLCG
NKVDIKDRKVKAKSIVFHRKKNLQYYDISAKSNYNFEKPFLWLARKLIGDPNLEFVEMPA
LAPPEIAMDPSLAAQYEHDLKVASETALPDEDDDL
NT seq 648 nt   +upstreamnt  +downstreamnt
atggcagagaacgagccacaagttcagtttaagctggttctggttggagacggaggtacg
gggaaaaccacctttgtgaagagacatttgactggggagtttgaaaagaaatatgttgcc
acacttggagttgaggtacatcccctggtcttccacacaaacagaggagccatcaaatat
aacgtatgggacacagccggacaagagaagttcggaggcctgagagatggatattacatc
caggctcagtgtgcaatcatcatgtttgatgtaacttctcgagtgacctataaaaacgtg
cccaactggcatcgtgacttggtgcgtgtgtgcgagaacattcccatagtgctgtgcggt
aacaaagtggacatcaaggacaggaaggtcaaagcaaagagtattgttttccatcgtaag
aagaatctacagtactatgacatctctgccaagagtaattataactttgagaagcccttc
ctttggcttgcacggaaactgattggagatcctaatctggagtttgttgagatgccagcc
cttgcaccacctgaaattgctatggacccatcacttgctgcacagtatgagcatgacttg
aaagtggcatcagaaacagctctcccagatgaagatgacgacctttaa

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