Rhinichthys klamathensis goyatoka (western speckled dace): 130086636
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Entry
130086636 CDS
T09701
Symbol
socs7
Name
(RefSeq) suppressor of cytokine signaling 7 isoform X1
KO
K04699
suppressor of cytokine signaling 6/7
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rkg04121
]
130086636 (socs7)
Ubiquitin system [BR:
rkg04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul5 complex
Target recognizing subunit
130086636 (socs7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SOCS_box
SH2
Motif
Other DBs
NCBI-GeneID:
130086636
NCBI-ProteinID:
XP_056108706
LinkDB
All DBs
Position
Unknown
AA seq
783 aa
AA seq
DB search
MNNAQDMSPDFVLMRLVSAAEDDRLDEENGNLSSGTGLTVAIKGNFECTQNHGHISAVNK
APQASGTEAPDAGVMATRPALSVPPPPLHSAEAHGYDLTHRGGMGPQLLVFRNISRDSEG
FAENKSEDQRRAFEEQAVLASESGAVDAQHPPTWTLHPQLKLPAVATDTEGAELCHRHRL
ITDKQDWPPVVDHKTGSMTEPGWSCTTALPEGPVLELARKFGELGVAPVPEFLLKDGELQ
HCSCQSMLGSAGIRQGDDPTETSDALLVLEGLGSEEVNGLGINACQKTDSQNNEPGAFAL
KCFPSVLSGQAMAVSGGLCSPACCLLRDSVNTRPQAPTTDKLTPEVLSQAASNQDTPCSS
QASTPKARSDRSTTRAHLSAASGGEKTLKVPGKSRKGSLKIRLSKLFRTKSCSGSNNLLD
KRPSVTFSISSAGSLVDMSGASGGEQDTASQPGLTRAQSAFSAASFTPVFTGETVSLVDV
DISQRGRNSPHPPTPPPPPRRSLSLLDDIGGPQPGPFLVSVMGASLQSLPLPLPPPPPLH
ATIQHSLSLNDAFFRALPHSAASPMDTAAPARVAPAPIMCPLRGADSSSFTASLRELERC
GWYWGPMNWEDAEMKLRGKPDGSFLVRDSSDPRYILSLSFRSQGVTHHTRMEHYRGTFSL
WCHPKFEDRCHSVVEFIERAIMHSKNGKFLYFLRSRVPGLPPTPVQLLYPVSRFSNVKSL
QHLCRFCIRQLVRIDHIQELPLPKPLIVYLRKFYYYDPEEEMYLSIKGMRQAAGVEQEAE
SET
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atgaacaacgcgcaagatatgtctcccgattttgtcttgatgcgcctggtctccgcggcc
gaggatgaccgcttggacgaggagaatgggaatctgtcatcgggcactggactgacggtg
gctatcaaggggaactttgaatgcacgcagaatcacggccacatctcggcggtgaacaaa
gctccgcaggccagcggaacggaggcacctgacgcgggagtgatggcgactagacctgcg
ctgtctgtgccgccgcctcctcttcattcagccgaggcccacgggtacgatctcacccac
cgaggtggaatggggcctcagctgttggtattcagaaacatatcgagagactctgaagga
tttgccgagaacaagtcggaggatcagcgaagggcttttgaggagcaagcggtactcgct
tcggagtctggcgctgtggacgctcagcatccgcctacatggacgctgcatccacagctc
aaactgccagcggttgctacggatacggagggagccgaactgtgtcaccggcatcgcttg
atcacagacaaacaagactggccgccggtggtggatcacaaaacgggctcgatgacagag
ccgggctggagctgcacgacggctctgcctgagggtcctgtcctggagctggcgaggaaa
ttcggcgagctgggagtcgctccggtacccgaatttctactgaaggacggcgagctgcag
cactgctcgtgtcaaagcatgctcggctcggctggaatcaggcagggagatgacccgacc
gagaccagcgatgctctgctggttctggagggcctcgggtcagaagaagtgaacggcctg
ggcatcaatgcctgtcagaagaccgattcccaaaacaatgagccgggtgcgtttgcgctc
aaatgtttcccgtcggtgctgtccggacaagctatggcagtgtccgggggactttgctca
ccggcgtgttgtttgttgcgagactctgtaaacaccaggcctcaggctcccaccacagat
aaactgactcccgaggttctatcgcaagccgcatccaaccaggacaccccgtgctccagc
caggcgtccacaccgaaggcccggtcggacaggagcacgacccgggcgcatctttccgcg
gccagcggaggagagaagactttgaaagtaccagggaaatccaggaagggctctcttaaa
atacgcctgagtaaactttttagaactaaaagctgtagtggctctaacaaccttttggac
aagagaccttcagtcacgttctccatatcatcagcgggcagtttagtggacatgtccgga
gcgagcggtggggaacaagacacagccagccaacctggactaacaagggcacaaagtgcc
ttctctgcggcctcttttactcccgttttcacaggagagacggtgtcgttggtggatgtg
gacatctctcagagagggaggaactcccctcaccctcccactcctccacctccccctcgg
cggagcctcagtctgctagacgatataggtgggccgcagcctgggcctttcctagtgagt
gtaatgggggcgtccctgcagtctctccctctgcctcttcctcctcctccccctctccac
gccaccatccagcatagtctcagcctcaatgatgctttcttccgagcacttcctcattcg
gccgcgtcaccgatggacacggcggcccctgccagagtggccccggctccgatcatgtgt
ccattgagaggagccgattccagcagcttcactgccagcctgagagagctggagcggtgt
ggctggtattgggggccgatgaactgggaggatgctgaaatgaagctaagagggaagcca
gatggctcgtttttggtgcgggacagttcagacccacgatacatcctcagcctcagtttt
cgctcacagggagtcacacaccacacgcgtatggagcactacagaggaaccttcagttta
tggtgccaccctaaatttgaggaccgctgccattctgtggttgaattcattgagcgagcc
atcatgcactctaaaaatggaaaattcctctacttcctacgttcccgtgtacctgggttg
cccccgacccccgtgcagctgctctacccagtctcacgcttcagcaatgtgaaatcactc
cagcatctgtgccgtttctgtatccgacaactcgtccgcatagaccacatccaggagctg
cccctccccaaacctctcattgtctacttgaggaagttctattactatgatccagaggaa
gaaatgtacctgtcaatcaaaggcatgcgccaggcagcaggtgtggaacaggaagccgag
tctgaaacatag
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