KEGG   Rhinichthys klamathensis goyatoka (western speckled dace): 130088204
Entry
130088204         CDS       T09701                                 
Name
(RefSeq) TNF receptor-associated factor 2
  KO
K03173  TNF receptor-associated factor 2 [EC:2.3.2.27]
Organism
rkg  Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg04010  MAPK signaling pathway
rkg04137  Mitophagy - animal
rkg04141  Protein processing in endoplasmic reticulum
rkg04210  Apoptosis
rkg04217  Necroptosis
rkg04621  NOD-like receptor signaling pathway
rkg04622  RIG-I-like receptor signaling pathway
rkg04920  Adipocytokine signaling pathway
rkg05132  Salmonella infection
rkg05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:rkg00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    130088204
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    130088204
 09140 Cellular Processes
  09141 Transport and catabolism
   04137 Mitophagy - animal
    130088204
  09143 Cell growth and death
   04210 Apoptosis
    130088204
   04217 Necroptosis
    130088204
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    130088204
   04622 RIG-I-like receptor signaling pathway
    130088204
  09152 Endocrine system
   04920 Adipocytokine signaling pathway
    130088204
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    130088204
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    130088204
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rkg03019]
    130088204
   04121 Ubiquitin system [BR:rkg04121]
    130088204
Enzymes [BR:rkg01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     130088204
Messenger RNA biogenesis [BR:rkg03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     130088204
Ubiquitin system [BR:rkg04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRAF proteins
    130088204
SSDB
Motif
Pfam: TRAF-mep_MATH MATH_2 TRAF_BIRC3_bd zf-TRAF TRAF2_zf TRAF3_RING zf-C3HC4 zf-C3HC4_2 zf-RING_6 ATG16 Sina_ZnF zf-C3HC4_4
Other DBs
NCBI-GeneID: 130088204
NCBI-ProteinID: XP_056110845
LinkDB
Position
Unknown
AA seq 581 aa
MAAQEPSPPSSMENNKPGFPKKILANKLEDKHLCNCCQNILRRPFQAQCGHRFCSYCFNR
TVGSGPQKCNACIKEDIFEEPTSILKQGCAFPDNAARREVENLPAVCINEGCAWKGSIRD
YELSHEGKCEFMILSCPLCKELIRFNEQERHNERVCPERTLNCKYCKEPFHFKNIKAHDE
ICPKYPMICEGCAKKKIPREKYVDHIKFCSKFRTPCRYHVVGCDMSVEKEKIHDHERACA
HEHLNLLLHYIMGMKVSLEGLQPQSLELAGHKAHELHQALRDLEARVSQLSAIPVQGVPS
SSSSSSSSSACAVAPPPPLPTSFTPLPSSVGAALELQLHSEKTKVADLGRRCQDLEVKAG
TFEDVVCVLNREVERFATTMEASNRQHRLDQDKIEALSNKVRQLERQVGVKDLTVAEMEG
RLREMSATTFDGVFIWRISDITKKRQDAIAGRAPAMFSPAFYTSKYGYKMCLRIYLNGDG
TGRGTHLSLFFVVMRGMSDALLKWPFNQKVTLMLLDQSNREHIIDAFRPDITSSSFQRPV
SEMNIASGCPLFCPLSKLEGKNSYIRDDTIFIKAIVDLTGL
NT seq 1746 nt   +upstreamnt  +downstreamnt
atggctgctcaagaaccctcccccccgtcctccatggagaacaacaagccagggttccca
aagaagatcctggccaacaaacttgaagacaaacatttatgcaactgctgtcagaacatt
ttgagaaggccgttccaagctcagtgcggtcatcgcttttgttcttactgcttcaaccgg
actgttggatctggaccacagaaatgtaatgcctgtatcaaggaggacatcttcgaagag
cccacgtcaattctcaaacaaggctgcgcgtttcccgacaatgctgccagaagagaagtt
gaaaatcttccagctgtgtgtatcaacgagggctgcgcctggaaaggcagtattagagat
tatgagttgagccatgaggggaagtgtgagttcatgattctgtcctgtcccttgtgcaag
gagctcattagatttaacgaacaggaacgtcataatgagcgcgtgtgtcctgagagaacg
ctcaactgcaaatactgtaaagaaccatttcacttcaaaaacatcaaggcccatgatgag
atctgtcccaaatatcctatgatttgtgaaggatgcgcgaagaagaaaatccccagggaa
aagtatgttgaccacatcaagttctgcagcaaattcaggactccgtgcagatatcatgtg
gttggctgtgacatgtcagtggagaaggagaagatccacgatcacgagcgtgcctgtgct
cacgaacatctaaacctgctgttgcactacatcatgggcatgaaggtcagtctggagggc
ctgcagccacaaagtctggagctggcgggtcacaaagctcacgagcttcaccaggcgctc
cgagacctggaagccagagtgagtcagctgagcgccatccccgtgcagggggttccctcc
tcttcgtcctcctcctcgtcctcctccgcgtgtgccgtcgctcctcctcctcctctgccc
acgtccttcacgcctctgcccagctcggtcggcgccgccctggaactgcaactccacagc
gagaagaccaaggtggcagatctgggccggcgctgccaggacctggaggtgaaggcgggg
acgtttgaagatgtggtgtgtgtgctgaatcgagaagtagagcgcttcgccaccaccatg
gaggccagcaaccgacaacacagactcgatcaggacaaaatcgaggctcttagcaacaag
gttcgtcagctggaacggcaggtgggtgttaaagacctgactgttgctgaaatggagggc
agactacgggagatgtccgcaaccacgtttgatggcgtcttcatctggcggatttcagat
attactaaaaagagacaagatgccattgctggacgggcgcctgccatgttttcacctgca
ttttacacaagcaagtatggctataagatgtgcctgcgcatttacctgaacggggatggg
acgggtcgtgggactcacctctcgctgttttttgtggtcatgagaggaatgagcgacgcg
ctgctcaaatggcccttcaaccagaaggtcacactgatgctgctggaccagagtaaccga
gagcacatcatcgatgcgttccgtcccgacatcacttcctcctcattccagaggcccgta
agcgagatgaacatcgccagcggctgcccgcttttctgtccgctgtccaagctggagggc
aagaactcgtacatacgggacgacaccatcttcatcaaagccatcgtggacctcacgggc
ctttag

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