Rhinichthys klamathensis goyatoka (western speckled dace): 130089197
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Entry
130089197 CDS
T09701
Symbol
tcf3b
Name
(RefSeq) transcription factor 3b isoform X1
KO
K09063
transcription factor E2-alpha
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rkg03000
]
130089197 (tcf3b)
Transcription factors [BR:
rkg03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Ubiquitous (class A) factors
130089197 (tcf3b)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
HLH
Motif
Other DBs
NCBI-GeneID:
130089197
NCBI-ProteinID:
XP_056112365
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All DBs
Position
Unknown
AA seq
653 aa
AA seq
DB search
MNEAHQRMATVGTDKELSDLLDFSAMFAPPVANGKNRPTTLASSQFSGSGMEERSSTWAA
GDQNSPSFNQSYGEGSHYNEHDGLSSPFLGTGISGKNERGPYSSFGGQPGFLPSDIAMPS
ADAMSPSGLKSGSQFYPSYPNNPRRRPSDGAMDPQPKKIRKPPGLPSSVYAATSGDDYIR
DGAAYPGSKPGTVYPGSFYMQEGLHSSSDPWAPSGPLGQSGYTAMLGNSPHINQPGSFSA
INAQDRMNYPLHGADVNGFHSGTTAYSHSSSLNGSDSILANRGPVASSSGDEIGKALASI
YPSDHNSNNFSSTPSTPVGSPQGIATGAAQWSRASGQTALSPNYEGGLHALQNKMEDRLE
EAIHVLRSHAVGQAPGIPGAHADMHGLLGAVSTSSGSMGGLTQTYSNPGLPLSNRHPAMA
GSHHDDHACLPPSSTLLQPAHASGTPQPGGAPEGFNNSSLPGGLAHSTHSSNKSDVKNED
KEDDENSSVADKSEEEKKESKQSRTRSRKEVFAHQVLSSLSDQGDDLDNEEDDEDLPPEL
KVEREKERRVANNARERLRVRDINEAFKELGRMCQLHLTNDKPQTKLLILHQAVNVILNL
EQQVRERNLNPKAACLKRREEEKVSGVVGDTQMQLSGAHQGLGGDGRNSVSHM
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaggcgcaccagagaatggctacagtgggaacagataaggaactcagtgacctg
ttggatttcagtgcgatgtttgcgccacctgtggctaatgggaagaacagaccaaccaca
cttgctagcagtcaatttagtggttcaggtatggaagagcgcagtagtacttgggctgcc
ggagatcaaaacagtccatcttttaaccagagctatggagagggttcgcactacaatgaa
catgatggactatcttccccattccttggcacagggattagtggtaagaatgaaaggggt
ccatactcttcctttgggggccagccggggttcttgccctcagacatcgccatgccttct
gcagatgccatgtcaccatccggtctgaagtcaggctctcaattctacccttcatacccc
aacaacccccgaagacgcccttctgatggagccatggatccccaaccaaaaaagatcagg
aagccgccaggactgccatcttcagtttatgctgccacctctggtgatgactatatccgt
gatggtgctgcctacccgggctccaaacctggcactgtgtacccaggatctttttacatg
caagagggcctacactcctcttcggacccctgggccccctctggacccttaggtcagtca
ggatacacggctatgctggggaattcgccacacatcaatcagcctggctccttctccgca
ataaacgcacaagacaggatgaactaccctttgcatggagcggacgtcaatggtttccat
tcgggcaccacagcctatagccactcatcctccctgaatggatcagacagcattttggcc
aatagaggcccagttgcaagcagctcaggtgatgagatcggaaaagctcttgcttcgatc
tacccttcggaccacaacagcaacaacttctcctccactccttccactcctgtgggctcc
cctcagggcattgcaacaggtgcagcacagtggtcgagagcttctggccagactgctctg
tctcctaactatgagggtggactacatgcactgcagaacaaaatggaagaccgactggag
gaggccattcacgtgctccgaagtcatgcggtgggtcaggccccgggaattcctggagcc
catgccgacatgcatggcctactgggtgccgtctccacatccagtggatccatggggggt
ctcactcagacctattccaacccaggactgcccctaagtaacagacaccctgccatggct
ggaagccatcatgacgaccatgcctgccttcctcccagcagcaccctgttgcagccagct
catgcttcaggcaccccacagcctggaggagcaccggagggttttaacaattcgagtttg
cccggaggcttggcccactccacgcattcgtcaaacaaatccgacgttaagaatgaagac
aaggaggatgacgagaactcatctgtggctgataagtctgaagaagagaagaaggaaagc
aaacagtctcgcaccagatcaagaaaggaggtgtttgcccatcaagtcctttcaagttta
tcagaccagggagacgatctagacaatgaagaagatgatgaggatttgccgccagagttg
aaggtcgagagggagaaggagcgacgagtggccaataacgcacgagagcgactgcgcgtg
cgtgacattaacgaggccttcaaagagctgggccgcatgtgccagctgcacctgaccaac
gataaaccccagaccaaactgctcatcctgcaccaggccgtcaacgtgatactaaacttg
gagcaacaagtccgtgaacgcaacctgaaccccaaagcagcttgtctgaagcgacgtgaa
gaggagaaagtgtccggggtggttggagacactcaaatgcagctgtccggagcacatcaa
ggccttggaggagatggacgcaactctgtcagtcacatgtga
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