Rhinichthys klamathensis goyatoka (western speckled dace): 130089827
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Entry
130089827 CDS
T09701
Symbol
traf2a
Name
(RefSeq) TNF receptor-associated factor 2 isoform X1
KO
K03173
TNF receptor-associated factor 2 [EC:
2.3.2.27
]
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg04010
MAPK signaling pathway
rkg04137
Mitophagy - animal
rkg04141
Protein processing in endoplasmic reticulum
rkg04210
Apoptosis
rkg04217
Necroptosis
rkg04621
NOD-like receptor signaling pathway
rkg04622
RIG-I-like receptor signaling pathway
rkg04920
Adipocytokine signaling pathway
rkg05132
Salmonella infection
rkg05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
130089827 (traf2a)
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
130089827 (traf2a)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
130089827 (traf2a)
09143 Cell growth and death
04210 Apoptosis
130089827 (traf2a)
04217 Necroptosis
130089827 (traf2a)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
130089827 (traf2a)
04622 RIG-I-like receptor signaling pathway
130089827 (traf2a)
09152 Endocrine system
04920 Adipocytokine signaling pathway
130089827 (traf2a)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
130089827 (traf2a)
09171 Infectious disease: bacterial
05132 Salmonella infection
130089827 (traf2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rkg03019
]
130089827 (traf2a)
04121 Ubiquitin system [BR:
rkg04121
]
130089827 (traf2a)
Enzymes [BR:
rkg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130089827 (traf2a)
Messenger RNA biogenesis [BR:
rkg03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
130089827 (traf2a)
Ubiquitin system [BR:
rkg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
130089827 (traf2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
TRAF_BIRC3_bd
zf-TRAF
zf-C3HC4
TRAF3_RING
zf-C3HC4_2
TRAF2_zf
zf-RING_5
zf-C3HC4_4
Sina_ZnF
zf-C3HC4_3
zf-RING_UBOX
zf-RING_4
zf-RING_6
zf-RING_2
zf-TRAF_2
DEC-1_N
MATH
zf-ACC
Rootletin
Motif
Other DBs
NCBI-GeneID:
130089827
NCBI-ProteinID:
XP_056113362
LinkDB
All DBs
Position
Unknown
AA seq
574 aa
AA seq
DB search
MAAQEPSPPSSLEGNKPGFPKKILANKLEDKHLCNICLKILRRPFQAQCGHRFCSYCFTK
AVSSGPQKCSACIKEDIFEEPTSILKQGCAFPDNAAKREVEALEAVCINEECCWTGIIKE
YEANHEGKCDFRILPCPSCKELLRANEVERHNERECPERTLNCKYCKEPFHFKNIKAHDE
ICPKYPMICEGCAKKKIPREKYVDHIKLCTKFRTPCRFHVVGCDMTVEKEKIHDHEQACS
YEHLNLLLHFIMGIKVNLESLQPQSLELAGHKIHELHQSLRELELKMGQLSGAVAPVQGA
CAPLPPPPAPTLGTSFTPLPTAVGAALELQIHSEKTKVVELSRRCQELELKVSTFENIVC
VLNREMERSATTMEAYNRQHRLDQDKIEILNNKVRQLERTVGLRDLSIVEMEAKMREMSA
ATYDGVFVWKISDFSKKRQDAVAGRAPAMFSPAFYTSKYGYKMCLRIYLNGDGTGRGTHL
SLFFVVMRGHSDALLKWPFNQKVTLMLLDQNNREHIIDAFRPDISSSSFQRPVSDMNIAS
GCPLFCPLSKLDSKNSYIRDDTIFIKAIVDLTGL
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atggctgcacaggaaccctcaccaccatcttcattagaaggcaacaaacctggcttcccc
aagaaaatactcgccaacaagctggaggacaagcatctgtgcaatatctgtctgaaaatc
cttaggagaccgtttcaggcgcagtgcggacaccgtttctgttcatattgttttactaaa
gcagtgagctccggaccacagaaatgcagtgcctgtataaaagaagatatatttgaagaa
ccaacatcaattttgaaacagggctgtgcatttcctgataatgctgccaagagagaagtt
gaagctcttgaagctgtttgcatcaatgaggaatgctgctggacaggcatcatcaaagaa
tatgaggcaaaccatgaaggaaagtgtgacttcaggatccttccctgcccatcatgcaaa
gagcttctgagagccaatgaagttgaacgtcacaatgagagagaatgcccagaaaggact
cttaattgtaaatactgcaaggagccttttcattttaaaaacattaaggctcatgatgag
atatgccctaaataccccatgatttgtgaaggttgtgccaagaaaaaaattccaagagag
aaatatgtggaccacattaaactgtgcaccaaattccgaacaccttgcagatttcatgtt
gtaggctgtgatatgacggtggaaaaggagaagatccacgaccatgagcaagcctgttcc
tatgagcacttaaaccttctactgcacttcatcatgggcatcaaggtgaacttggagagt
ctgcagcctcagagtttggagctggccggccataagatccacgagctgcatcagtctctg
cgggaactggagctgaagatgggccagctgagtggagcagtggctcccgtgcagggggcc
tgtgcaccgcttcctccaccgccggctccaacgctgggtacgtctttcacccccctccct
actgccgtcggggcagccttggagctgcagatacacagcgagaagaccaaagtggtggag
ctcagccgccgctgtcaggagctggagctgaaggtgagcacctttgagaacatcgtctgt
gtgctcaaccgtgagatggagcgctccgctaccaccatggaggcctataaccgccaacac
cggcttgaccaggacaagattgagatactcaacaacaaggtacggcagttggagaggacg
gtaggccttagggatctctccatcgtggagatggaggcaaagatgagggagatgtccgct
gccacctacgatggcgtctttgtatggaagatctccgacttctcgaagaagagacaggat
gctgtagctggacgggcgcctgctatgttctcacctgcattttatacaagcaaatatggc
tataagatgtgtttgcgcatctatctgaatggggacgggacgggacgtggtactcacttg
tctctgttcttcgtggtgatgaggggacacagtgatgccttgctcaagtggcctttcaat
cagaaggtcaccctcatgttgctggatcagaacaacagggagcacatcattgatgccttc
cgcccagacatttcctcttcctccttccagaggcctgtgagtgacatgaacattgccagc
ggctgccctctcttctgccctctctccaaactagactccaagaactcctacatccgagat
gacactatcttcatcaaggccattgttgacctcacaggcctttaa
DBGET
integrated database retrieval system
