Rhinichthys klamathensis goyatoka (western speckled dace): 130091054
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Entry
130091054 CDS
T09701
Symbol
smcr8b
Name
(RefSeq) guanine nucleotide exchange protein smcr8b
KO
K23611
guanine nucleotide exchange protein SMCR8
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
130091054 (smcr8b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rkg04131
]
130091054 (smcr8b)
Membrane trafficking [BR:
rkg04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
130091054 (smcr8b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Folliculin
UPF0181
Motif
Other DBs
NCBI-GeneID:
130091054
NCBI-ProteinID:
XP_056114716
LinkDB
All DBs
Position
Unknown
AA seq
999 aa
AA seq
DB search
MIGSPDLVAFTKETDFSEIDPSALPEELSVPMYPYTGDITPWSRMSGANFKKDFILLSEF
SEQVGPQPLLTVPPETKACGTFDLNHFSLRIMSVDYQSSLASSASCGSLKLNFVEDSMVV
LGDSREGAFAYVHHLTLYDLEARGFVRPLCLAYVSSDENKIMQQFQQLSTEFSKVSECLK
TGNRKNFANELEIKLRDLEYTKVMLLREIEREFNNASVKCTNERERMLNGMPTLDRNTED
VKLNECETEMKLQEKDGSGISKKAEVESENENRSCITHEKDKRFGDRRDKQDKRSCPMPL
ANKEQELATVEKSIQDYKSLLKQVTCYPTRKLRNSEYSPYEPDDLPHSLELDLDDLRHDQ
LAEPMLECNVFPYTNTPSHSLQLINPTSSCRFDKRLKTLEELCDDYFHQQALQQLYSIER
TFRGDICHLYTQLLCRNLLRNLKSTNFLFEDPCDLEEGAGLQTEIAGQHSVRQPSFLSAP
SILSELVSLESYASCVEMVPIKLELAGSNQSPVVPSSVNTPSEHNLPLTSDTAPVEAEME
NEGVVTALVCQENVEYVSALMKTSISSGDSIEVLGTEKSFRSQGSNLPMDTALQSPPPLS
TTAALEGLRQGRVPTRRTCSEDSIEVLSTTESILQEELRALYPCAIDEESPEQENDEKDR
CQKQDNKNVECVFGVGNVPGDHGGAFLESPQGFYPVVTLTPPDCPITLSLGGLSLQDACH
ATESIPLSLSEEPCRTIPDDLSDCFSYRSTTASTTSECPFSACLPRGKKEGGTRRRRGRV
GRAALQFLRQFPFAVHAVYSLLSGRTLVVLGNEEAAVRRLVTALSVYMPHPSRYRDSIQP
WTSTPLQLTDLLNWKLIGFNRMCCFTHTTLPHCLGHYSRYISVLDVDQKTLRCPTYSGTL
INLLVDPRSNFKRGNTYFMFAQSVQSKLVTRAFLLTFLNGRLTPRRARESTWTKRFLSEF
HKDDKKILNYLSELIKLNLMEIPPNVLRFSYATTSIFKH
NT seq
3000 nt
NT seq
+upstream
nt +downstream
nt
atgattggttctccagacttggtagcttttactaaagaaacagatttcagtgaaatagac
ccatcagctcttccagaggagctgtctgtgcccatgtatccctacactggggatatcact
ccgtggtccaggatgtctggtgctaattttaagaaggactttattcttttatcagagttt
tcagagcaagttgggccccaacctttgcttactgttcctcctgaaaccaaagcgtgtggg
acgtttgatttgaaccacttctcccttcggattatgtcagtggactatcagtcctctctc
gccagctcggcaagttgtggctctttgaaactgaactttgtagaagactcaatggtagtt
ttaggggattctagagaaggagcatttgcatatgtgcaccaccttacgctctatgacctg
gaggctcgagggtttgtacgaccactttgtcttgcttatgtgtcatcagatgagaataaa
atcatgcaacaattccagcagctttccacagagttctccaaagtatctgaatgtctgaaa
acggggaacaggaagaactttgcgaatgaactggagataaaactaagagatctggagtat
acaaaagtcatgttacttagagagatagaaagagagttcaataatgcatctgtgaagtgc
accaatgaaagggaacggatgttgaatggtatgcctacattagatagaaatacagaagat
gtgaaactgaatgagtgtgaaactgaaatgaaattacaagagaaagacggaagtgggatt
tcaaaaaaggcggaagtagaatctgaaaatgagaataggtcatgtattacacacgagaaa
gataaacggtttggggatcgaagggacaagcaggataaaagatcttgcccaatgccattg
gctaacaaagaacaggagttggccactgtagaaaaatcgattcaggattataaaagcctt
ttaaaacaggtcacttgctatccaaccaggaagcttagaaactctgagtactccccttat
gaaccagatgacctccctcattctctggaacttgacctggatgatttaaggcacgatcag
cttgctgagccaatgctagaatgcaatgtttttccttacacaaacacaccctcgcattct
ctgcagctgattaaccccacttcatcttgccgatttgacaagcgtctgaaaactctcgag
gaattgtgtgacgactacttccaccaacaggctctacagcaactgtactccatagagagg
acattcagaggagatatttgccatctctacacacaactcctctgccgtaatcttctccgc
aaccttaaatctaccaatttcttatttgaggatccatgtgacttggaagagggtgctgga
ttacagactgaaatagctggtcaacattcagtgcgacaaccgtcctttctttctgcaccc
tcaattctaagtgaacttgtcagtcttgagtcatatgcctcctgtgttgaaatggtgcca
atcaaactagagttggctggatctaaccaatctccagttgtacccagctctgtaaatacc
ccttccgagcataacctacccttgacatccgacaccgccccagtagaggctgaaatggaa
aatgagggagtagttactgctctggtttgtcaagaaaatgtggaatatgtttcagctttg
atgaagaccagtattagtagtggagatagtatcgaagtcttagggacagagaagtccttc
agatcccaaggttcaaatttaccaatggatacggcactgcaaagtccaccacctttgtcc
actacagctgcactggagggtctaaggcaagggagggtacctaccagacggacttgcagt
gaagacagcattgaggtgcttagcacgacagaatccatcctacaagaagaattgcgtgcc
ttatacccttgcgcaattgatgaggaaagcccagagcaagagaatgatgagaaagacagg
tgtcaaaaacaagacaacaaaaatgttgaatgtgttttcggggtgggaaatgttcctgga
gatcatggaggtgcctttttggagtcgccgcaaggtttttatcctgttgtcaccctgact
ccacctgactgtcctattactttatccctgggtgggttaagcttacaagatgcttgtcat
gcaacagaatcgatccctctctcattgtcagaggagccctgtcggacaatacctgatgat
ttgtcagactgcttcagctatcggagcaccactgcctccacaacctccgaatgccctttc
tctgcttgtcttcccaggggaaaaaaagaaggtgggaccagacgaaggcgtggcagagta
gggcgggcagcattgcagttcttgcgacagtttccctttgcagtgcatgcagtgtatagc
ctactgagtgggagaacattggtggtactaggcaacgaggaggctgcagtgagacgacta
gttacagcactgtctgtgtacatgccacatccgagtagatacagagacagcattcaacct
tggacttcaacgccgctgcagcttactgacctgctcaactggaaactcatcggctttaat
aggatgtgctgttttactcacacaactttgcctcactgcctgggccattacagccgatac
atcagtgttctagatgtggatcaaaagacactgcgctgcccaacctacagtggtactcta
atcaacctgctggtggatccaaggagcaactttaaacgtggaaacacctacttcatgttt
gctcaaagtgtgcaaagcaagcttgtcaccagagcattccttttaacatttttaaatggt
cgccttacacccagaagggctcgggaaagtacatggacaaaacgttttctttctgaattt
cacaaagatgataagaaaatcctcaactatttatctgagctcattaaactaaacttaatg
gagattccacccaatgtcctccgattcagctacgccacaacctccattttcaaacactga
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