KEGG   Rhinichthys klamathensis goyatoka (western speckled dace): 130091054
Entry
130091054         CDS       T09701                                 
Symbol
smcr8b
Name
(RefSeq) guanine nucleotide exchange protein smcr8b
  KO
K23611  guanine nucleotide exchange protein SMCR8
Organism
rkg  Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:rkg00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    130091054 (smcr8b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rkg04131]
    130091054 (smcr8b)
Membrane trafficking [BR:rkg04131]
 Autophagy
  Other autophagy associated proteins
   Rab associated proteins
    130091054 (smcr8b)
SSDB
Motif
Pfam: Folliculin UPF0181
Other DBs
NCBI-GeneID: 130091054
NCBI-ProteinID: XP_056114716
LinkDB
Position
Unknown
AA seq 999 aa
MIGSPDLVAFTKETDFSEIDPSALPEELSVPMYPYTGDITPWSRMSGANFKKDFILLSEF
SEQVGPQPLLTVPPETKACGTFDLNHFSLRIMSVDYQSSLASSASCGSLKLNFVEDSMVV
LGDSREGAFAYVHHLTLYDLEARGFVRPLCLAYVSSDENKIMQQFQQLSTEFSKVSECLK
TGNRKNFANELEIKLRDLEYTKVMLLREIEREFNNASVKCTNERERMLNGMPTLDRNTED
VKLNECETEMKLQEKDGSGISKKAEVESENENRSCITHEKDKRFGDRRDKQDKRSCPMPL
ANKEQELATVEKSIQDYKSLLKQVTCYPTRKLRNSEYSPYEPDDLPHSLELDLDDLRHDQ
LAEPMLECNVFPYTNTPSHSLQLINPTSSCRFDKRLKTLEELCDDYFHQQALQQLYSIER
TFRGDICHLYTQLLCRNLLRNLKSTNFLFEDPCDLEEGAGLQTEIAGQHSVRQPSFLSAP
SILSELVSLESYASCVEMVPIKLELAGSNQSPVVPSSVNTPSEHNLPLTSDTAPVEAEME
NEGVVTALVCQENVEYVSALMKTSISSGDSIEVLGTEKSFRSQGSNLPMDTALQSPPPLS
TTAALEGLRQGRVPTRRTCSEDSIEVLSTTESILQEELRALYPCAIDEESPEQENDEKDR
CQKQDNKNVECVFGVGNVPGDHGGAFLESPQGFYPVVTLTPPDCPITLSLGGLSLQDACH
ATESIPLSLSEEPCRTIPDDLSDCFSYRSTTASTTSECPFSACLPRGKKEGGTRRRRGRV
GRAALQFLRQFPFAVHAVYSLLSGRTLVVLGNEEAAVRRLVTALSVYMPHPSRYRDSIQP
WTSTPLQLTDLLNWKLIGFNRMCCFTHTTLPHCLGHYSRYISVLDVDQKTLRCPTYSGTL
INLLVDPRSNFKRGNTYFMFAQSVQSKLVTRAFLLTFLNGRLTPRRARESTWTKRFLSEF
HKDDKKILNYLSELIKLNLMEIPPNVLRFSYATTSIFKH
NT seq 3000 nt   +upstreamnt  +downstreamnt
atgattggttctccagacttggtagcttttactaaagaaacagatttcagtgaaatagac
ccatcagctcttccagaggagctgtctgtgcccatgtatccctacactggggatatcact
ccgtggtccaggatgtctggtgctaattttaagaaggactttattcttttatcagagttt
tcagagcaagttgggccccaacctttgcttactgttcctcctgaaaccaaagcgtgtggg
acgtttgatttgaaccacttctcccttcggattatgtcagtggactatcagtcctctctc
gccagctcggcaagttgtggctctttgaaactgaactttgtagaagactcaatggtagtt
ttaggggattctagagaaggagcatttgcatatgtgcaccaccttacgctctatgacctg
gaggctcgagggtttgtacgaccactttgtcttgcttatgtgtcatcagatgagaataaa
atcatgcaacaattccagcagctttccacagagttctccaaagtatctgaatgtctgaaa
acggggaacaggaagaactttgcgaatgaactggagataaaactaagagatctggagtat
acaaaagtcatgttacttagagagatagaaagagagttcaataatgcatctgtgaagtgc
accaatgaaagggaacggatgttgaatggtatgcctacattagatagaaatacagaagat
gtgaaactgaatgagtgtgaaactgaaatgaaattacaagagaaagacggaagtgggatt
tcaaaaaaggcggaagtagaatctgaaaatgagaataggtcatgtattacacacgagaaa
gataaacggtttggggatcgaagggacaagcaggataaaagatcttgcccaatgccattg
gctaacaaagaacaggagttggccactgtagaaaaatcgattcaggattataaaagcctt
ttaaaacaggtcacttgctatccaaccaggaagcttagaaactctgagtactccccttat
gaaccagatgacctccctcattctctggaacttgacctggatgatttaaggcacgatcag
cttgctgagccaatgctagaatgcaatgtttttccttacacaaacacaccctcgcattct
ctgcagctgattaaccccacttcatcttgccgatttgacaagcgtctgaaaactctcgag
gaattgtgtgacgactacttccaccaacaggctctacagcaactgtactccatagagagg
acattcagaggagatatttgccatctctacacacaactcctctgccgtaatcttctccgc
aaccttaaatctaccaatttcttatttgaggatccatgtgacttggaagagggtgctgga
ttacagactgaaatagctggtcaacattcagtgcgacaaccgtcctttctttctgcaccc
tcaattctaagtgaacttgtcagtcttgagtcatatgcctcctgtgttgaaatggtgcca
atcaaactagagttggctggatctaaccaatctccagttgtacccagctctgtaaatacc
ccttccgagcataacctacccttgacatccgacaccgccccagtagaggctgaaatggaa
aatgagggagtagttactgctctggtttgtcaagaaaatgtggaatatgtttcagctttg
atgaagaccagtattagtagtggagatagtatcgaagtcttagggacagagaagtccttc
agatcccaaggttcaaatttaccaatggatacggcactgcaaagtccaccacctttgtcc
actacagctgcactggagggtctaaggcaagggagggtacctaccagacggacttgcagt
gaagacagcattgaggtgcttagcacgacagaatccatcctacaagaagaattgcgtgcc
ttatacccttgcgcaattgatgaggaaagcccagagcaagagaatgatgagaaagacagg
tgtcaaaaacaagacaacaaaaatgttgaatgtgttttcggggtgggaaatgttcctgga
gatcatggaggtgcctttttggagtcgccgcaaggtttttatcctgttgtcaccctgact
ccacctgactgtcctattactttatccctgggtgggttaagcttacaagatgcttgtcat
gcaacagaatcgatccctctctcattgtcagaggagccctgtcggacaatacctgatgat
ttgtcagactgcttcagctatcggagcaccactgcctccacaacctccgaatgccctttc
tctgcttgtcttcccaggggaaaaaaagaaggtgggaccagacgaaggcgtggcagagta
gggcgggcagcattgcagttcttgcgacagtttccctttgcagtgcatgcagtgtatagc
ctactgagtgggagaacattggtggtactaggcaacgaggaggctgcagtgagacgacta
gttacagcactgtctgtgtacatgccacatccgagtagatacagagacagcattcaacct
tggacttcaacgccgctgcagcttactgacctgctcaactggaaactcatcggctttaat
aggatgtgctgttttactcacacaactttgcctcactgcctgggccattacagccgatac
atcagtgttctagatgtggatcaaaagacactgcgctgcccaacctacagtggtactcta
atcaacctgctggtggatccaaggagcaactttaaacgtggaaacacctacttcatgttt
gctcaaagtgtgcaaagcaagcttgtcaccagagcattccttttaacatttttaaatggt
cgccttacacccagaagggctcgggaaagtacatggacaaaacgttttctttctgaattt
cacaaagatgataagaaaatcctcaactatttatctgagctcattaaactaaacttaatg
gagattccacccaatgtcctccgattcagctacgccacaacctccattttcaaacactga

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