KEGG   Rhinichthys klamathensis goyatoka (western speckled dace): 130091060
Entry
130091060         CDS       T09701                                 
Symbol
actb1
Name
(RefSeq) actin, cytoplasmic 1
  KO
K05692  actin beta/gamma 1
Organism
rkg  Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg03082  ATP-dependent chromatin remodeling
rkg04145  Phagosome
rkg04210  Apoptosis
rkg04510  Focal adhesion
rkg04520  Adherens junction
rkg04530  Tight junction
rkg04810  Regulation of actin cytoskeleton
rkg04814  Motor proteins
rkg04820  Cytoskeleton in muscle cells
rkg05100  Bacterial invasion of epithelial cells
rkg05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:rkg00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    130091060 (actb1)
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    130091060 (actb1)
  09143 Cell growth and death
   04210 Apoptosis
    130091060 (actb1)
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    130091060 (actb1)
   04520 Adherens junction
    130091060 (actb1)
   04530 Tight junction
    130091060 (actb1)
  09142 Cell motility
   04814 Motor proteins
    130091060 (actb1)
   04820 Cytoskeleton in muscle cells
    130091060 (actb1)
   04810 Regulation of actin cytoskeleton
    130091060 (actb1)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    130091060 (actb1)
   05100 Bacterial invasion of epithelial cells
    130091060 (actb1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rkg03021]
    130091060 (actb1)
   03019 Messenger RNA biogenesis [BR:rkg03019]
    130091060 (actb1)
   03036 Chromosome and associated proteins [BR:rkg03036]
    130091060 (actb1)
   03029 Mitochondrial biogenesis [BR:rkg03029]
    130091060 (actb1)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:rkg04812]
    130091060 (actb1)
   04147 Exosome [BR:rkg04147]
    130091060 (actb1)
Transcription machinery [BR:rkg03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     130091060 (actb1)
Messenger RNA biogenesis [BR:rkg03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Factors that have mRNA localization signals
     130091060 (actb1)
Chromosome and associated proteins [BR:rkg03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    TIP60 complex
     130091060 (actb1)
    NuA4 complex
     130091060 (actb1)
  Chromatin remodeling factors
   BAF complex
    130091060 (actb1)
   PBAF complex
    130091060 (actb1)
   GBAF(ncBAF) complex
    130091060 (actb1)
   SWR1 complex
    130091060 (actb1)
Mitochondrial biogenesis [BR:rkg03029]
 Mitochondrial quality control factors
  Mitochondrial dynamics
   Actin cytoskeleton organization
    130091060 (actb1)
Cytoskeleton proteins [BR:rkg04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actins
    Actins
     130091060 (actb1)
Exosome [BR:rkg04147]
 Exosomal proteins
  Proteins found in most exosomes
   130091060 (actb1)
SSDB
Motif
Pfam: Actin
Other DBs
NCBI-GeneID: 130091060
NCBI-ProteinID: XP_056114724
LinkDB
Position
Unknown
AA seq 375 aa
MDEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS
KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL
AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMGTAASSSSLEKSY
ELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLS
GGTTMYPGIADRMQKEITSLAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ
EYDESGPSIVHRKCF
NT seq 1128 nt   +upstreamnt  +downstreamnt
atggatgaggaaatcgccgccctggtcgttgataacggctccggtatgtgcaaagccggt
tttgctggagatgatgcccctcgtgctgttttcccttccattgttggccgacccaggcat
cagggagtgatggttggcatgggacagaaggactcctatgtgggagatgaggctcagagc
aagagaggtatcctgacccttaagtatcccattgagcacggtattgttaccaactgggat
gatatggagaagatctggcaccacactttctacaatgagctgcgtgttgcccctgaggag
caccctgtcctgcttacagaggctcccctgaatcccaaggccaacagggagaagatgaca
cagatcatgtttgagaccttcaacacccctgccatgtatgtggccatccaggctgtgctc
tccctgtatgcttctggtcgtactactggtatcgtgatggactctggtgatggtgttacc
cacaccgtgcccatctatgagggttatgctcttccccatgccatcctgcgtctggatctg
gctggtcgtgacctgacagactacctgatgaagatcctgaccgagcgtggctacagcttc
accaccacggccgagagagaaattgtccgtgacatcaaggagaagctgtgctacgtggcc
ctggacttcgagcaggagatgggaaccgctgcctcatcttcctccctggagaagagctac
gagctgcctgacgggcaggtcatcaccattggcaatgagcgtttccgttgccctgaggct
ctcttccagccatccttccttggtatggaatcttgcggtatccatgagactaccttcaac
tccatcatgaagtgtgacgtggacatccgtaaggacctgtatgccaacacagtgctgtct
ggaggtaccaccatgtaccctggcattgctgaccgtatgcagaaagaaatcacctccctt
gctccttccaccatgaagatcaagatcattgctccccctgagcgcaaatactccgtctgg
atcggtggctccatcttggcctccctgtccaccttccagcagatgtggatcagcaagcag
gagtacgatgagtccggcccatccatcgtccacaggaagtgcttctaa

DBGET integrated database retrieval system