Rhinichthys klamathensis goyatoka (western speckled dace): 130094475
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Entry
130094475 CDS
T09701
Symbol
ptprfb
Name
(RefSeq) receptor-type tyrosine-protein phosphatase F isoform X1
KO
K05695
receptor-type tyrosine-protein phosphatase F [EC:
3.1.3.48
]
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg04514
Cell adhesion molecules
rkg04520
Adherens junction
rkg04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
130094475 (ptprfb)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
130094475 (ptprfb)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
130094475 (ptprfb)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
rkg01009
]
130094475 (ptprfb)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
rkg04515
]
130094475 (ptprfb)
Enzymes [BR:
rkg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
130094475 (ptprfb)
Protein phosphatases and associated proteins [BR:
rkg01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
130094475 (ptprfb)
Cell adhesion molecules [BR:
rkg04515
]
Immunoglobulin superfamily
Type II RPTP family
130094475 (ptprfb)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Y_phosphatase
fn3
I-set
Ig_3
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Ig_2
ig
Interfer-bind
fn3_2
Tc-R-P
PTP-SAK
V-set
DSPc
Y_phosphatase3
C2-set_2
Fn3_VIN3
PTPlike_phytase
PTP-NADK
Ig_VEGFR-1-like_5th
Fn3_PTPRU
Fn3_ELFN
Insulin_TMD
TMEM154
DUF3377
Motif
Other DBs
NCBI-GeneID:
130094475
NCBI-ProteinID:
XP_056116755
LinkDB
All DBs
Position
Unknown
AA seq
1908 aa
AA seq
DB search
MVPNICMSVPLLPVGLPLLLLLSCVQFSSQADSLPNFIKSPEDQTGISGGVASFVCQAAG
EPKPRITWMKKGKKVSSQRFEVIEFDDGSGSVLRIQPLRTHRDEAIYECTATNSMGEINT
SAKLTVLEENQIPHGFPTIDMGPQLKVVERTRTTTMLCAASGNPDPEITWFKDFLPVDIN
SNGRIKQLRSGALQIENSEESDQGKYECVAMNSAGTRYSAPANLYVRVRRVPPRFSIPPT
NHEVMPGGSVNLTCVAVGAPMPYVKWMAGDVELTKDEEMPVGRNVLELNNIRQSTNYTCV
AISSLGMIEATAQVSVKALPKPPTSFIVTETTATSVTLIWDSGNPEPVSYYIIQYRAKTS
DTNFQEVDGVATTRYSIGGLSPYSEYEFRVMAVNNIGRGPPSDPVETRTGEQAPSSPPLH
VQARMLSASTMLVQWEPPEEPNGQIRGYRIYYTSDLDAPLSAWQKHNTDDSRLTTISSMT
TDITYSLRVLGFTSVGDGPPSDVLQVKTQQGVPAQPSSFEAEAELDTRIQLTWLWPVQDP
IIKYELLYWEDDSDNKIHVTFDPAGSYAVEGLKPDTVYKFSLAARSEMGLGVFTQPIEAK
TAQSTPSAPPQDVHLLSLSSTSIKVSWVAPPAASRHGAIVRYTVSYQAVNNEDSERHEVK
DIGADASSYVLDGLEKWTEYQVWVRAHTDVGPGPESTAVRKRTNEDVPGAPPRKVEVEAV
NSTAIRVTWKPPLSGKQHGQIRGYQVIHSRLENGEPRGQPIIMDVALPEAQWKIEESTEY
EAVITGLLSETSYSVTVAAYTTRGDGARSKAKVITTTGAVPGKPTMIISTTVGNTALIQW
QPPKDMVGELIGYRLRYKHLEEENYEVREFARTDDHHTATDLHKGATYSFHLSARNRAGA
GEEYVKEISTPEDVPSGFPQNLRVVGLTTSTTRLSWEPPILSERNGRITQYLVVYRDINS
KQNSTNRTNETQMTIQGLRPDTTYDIRVQAFTSKGGGPISPSIQSRTMSTSPAFATSFGV
KAVMKTSVLLTWEVPENYKSQVPFKILYNQQSVEVQGNLKRKLITRLQPDTDYSFVLMSR
GNSAGGLQQQVSIRTAPDLFKSKPVLYTAEQTNNGKLSINLPKVPTSAPVRCYYIVVVPG
SPTSSRKWINPDEMELDDLLESTEGALLRRRRHSDTVRPYIAAKLLSLPDSFTLGDEKTY
SGFYNRPLSNSQNYQCFVMAELKDQYPVAANEKQRTFSASPYSDLIMVTDENHMQRSMDQ
PEMLWVMGPVLAVVLIIIIVIAILLFKRKRASPLPKDDHSSGVKDCLLANSSDPVEMRRL
NYQTPGMREHPPISVCELADHIERLKANDALRFSQEYESIDPGQQFTWENSNLEVNKPKN
RYANVIAYDHSRVVLTPVDGVPGSDYINANYIDGYRKQNAYIATQGPLPETLSDFWRMVW
EQRASTIVMMTRLEEKSRVKCDQYWPIRGTETYGMIQVTMLDAVELATYSVRTFALYKNG
SSEKRELRQFQFMAWPDHGVPEYPTPILAFLRRVKACNPPDAGPMVVHCSAGVGRTGCFI
VIDAMLERMKHEKTVDIYGHVTCMRAQRNYMVQTEDQYIFIHEALLEAATCGNTEVPARN
LYAHIQKLTQPPSGETVTAMELEFKRLANSKAHTSRFISANLPCNKFKNRLVNIMPFEST
RVCLQPIRGVEGSDYINASCIDGYRQQKAYIATQGPLAETTEDFWRMLWEHNSTIVVMLT
KLREMGREKCHQYWPAERSARYQYFVVDPMAEYNMPQYILREFKVTDARDGQSRTIRQFQ
FTDWPEQGVPKTGEGFIDFIGQVHKTKEQFGQDGPITVHCSAGVGRTGVFITLSIVLERM
RYEGVVDLFQTVKTLRTQRPAMVQTEDQYQLCYRAALEYLGSFDHYAT
NT seq
5727 nt
NT seq
+upstream
nt +downstream
nt
atggtgcctaatatttgcatgtccgtgcccctcctgcccgttgggcttcctctactgctt
ctgctgagctgcgtgcaattctcctctcaggcggacagcttgccaaatttcatcaaatct
ccagaggaccagacagggatttcaggaggagtggcatcctttgtgtgccaagcagcgggt
gagcccaagcctcggatcacatggatgaagaaaggaaagaaagttagctcccagcgcttt
gaggtgattgaatttgatgacggttcgggctcagttctccgcatacagccgctgcgcact
cacagggacgaggccatctatgagtgcacagccaccaacagcatgggagaaatcaacacc
agcgccaaactcactgtgctggaagaaaaccagattcctcatggctttccgaccatagac
atgggccctcagctaaaagtggtggagcgaacaagaacaaccacgatgctctgtgccgcc
agtgggaaccctgacccggagatcacttggttcaaggacttcctgcctgtagacatcaac
agcaacgggcgaattaaacagcttcgttcaggagctctgcagattgaaaacagcgaggaa
tcagaccagggcaagtacgaatgtgtagctatgaacagcgccgggacgcgctactctgcc
cccgccaatctctacgtgcgagtacgacgagtgccgccccgtttctccatcccacccacc
aatcacgaggttatgccagggggtagtgtcaaccttacctgtgtggcagtaggtgccccc
atgccctacgtcaaatggatggctggtgatgtggagctcaccaaggatgaggagatgccc
gtggggcgcaatgtcctggagctcaacaacatccgtcagtcgaccaactacacatgcgta
gctatctcatccctgggtatgattgaggcaaccgcacaagtttctgtcaaagctctccca
aagcctcctacatctttcattgtgacggaaaccacagctacgagcgttaccctgatatgg
gactctggaaaccctgaacctgtgtcttactacattattcagtaccgggccaagacctcg
gacaccaacttccaagaagtggacggtgttgccaccacgcgttacagcattggtggtctc
agcccttattccgagtatgagttccgcgtgatggcggtcaacaacatcggccgtgggcca
cccagtgacccggttgagacacgaacgggtgagcaggcgccttcctccccacctctgcac
gtccaggcacgtatgctgagtgccagcaccatgttggtgcagtgggaaccgccagaggaa
cctaatggtcagattagaggctatcgaatctactacacatctgacctggacgctcctctc
agtgcctggcagaaacacaacacggacgacagccgtctcaccacaatctcgagcatgacc
accgacattacctatagcctacgtgtcctgggcttcacatctgtaggggacgggcctcca
tctgatgtgttgcaggtcaagacacagcaaggagttcctgctcagccatccagctttgag
gcggaggcggagctggatacgcggatccagctaacttggctgtggccggtccaggacccc
attattaaatatgaactgctatattgggaggatgactcggataacaagatccatgtcacc
ttcgaccctgctggctcatacgctgttgaaggtctgaagccggacactgtgtataaattc
tccctggcggcccgctctgaaatgggacttggggtcttcactcagcccatcgaagccaag
accgcccagtccaccccctctgccccccctcaagacgtgcacctgctcagcctgagctcc
accagcatcaaggtgagttgggtggcgccgccggccgctagtcgccacggcgctatcgtg
cgctacacagtcagctaccaggcggtgaacaatgaagactcggagcgccacgaggtgaag
gacatcggagcggatgcttccagctatgtgctggatgggctggagaagtggacggagtat
caggtgtgggtgagagcgcacaccgatgtgggccccggcccagagagcacagctgtgcgt
aaacgtaccaatgaggacgtgccaggagccccacctcggaaagtggaagtggaggctgtg
aactccacagctattcgtgtgacatggaagccaccactctctgggaagcagcacggccag
atccggggataccaggtcatacactcccgcctggagaacggggagccacgcggacagcct
attataatggatgtcgctctgccagaagcacagtggaaaattgaagagtccacggaatat
gaagctgtgatcactggacttctctccgagacctcttactctgttaccgtggcagcgtac
acaaccaggggcgatggggcgcgcagtaaagccaaagtcatcaccaccaccggagcagtg
cctggcaaacccaccatgatcatcagcaccaccgtcggcaacacggctctcatccagtgg
cagcctcctaaggacatggttggcgagctgatcggctaccgactgcggtacaagcatctg
gaggaagagaactatgaagtccgtgagttcgcacgcaccgacgaccaccacaccgccaca
gacctgcacaagggcgccacctacagcttccacctgagcgccaggaaccgggcaggagcc
ggagaggagtacgtaaaagagatcagcactccggaggacgtgcccagcgggtttccccaa
aacctgcgcgtcgtgggcttgaccacctccaccacccgcctgtcctgggaaccgcccatc
ctgtctgagcgcaacggccgaatcactcaatatttagtggtgtaccgtgacatcaacagc
aaacagaacagcaccaaccgcaccaacgaaacccagatgaccatccaggggcttcggcca
gacaccacctatgatattcgtgtgcaagccttcaccagcaagggagggggtcccataagc
cccagtatccagagcaggaccatgtctacatcacctgcatttgccacaagttttggtgtc
aaagctgtgatgaaaacctctgtccttctcacctgggaagtaccagaaaattataaatcc
caagtgccttttaagatcctctataaccagcagagtgtggaagtccaaggcaacctcaag
aggaagctgatcacgcgactgcagccagacacggattactcctttgtgctgatgagcaga
gggaacagtgccggtggtctgcagcaacaggtttccattcgaactgcacccgacctgttc
aaaagtaaacctgtcctgtacacagcagaacagaccaataatggaaaactcagcatcaac
ctccccaaagtgcccacctcagctcctgtcaggtgttactacattgtggtcgtgcccggg
tctcctacatcatctcgtaagtggattaatcctgatgagatggagctggatgacctcctg
gagtctactgaaggagctctgctcaggagacgacgtcactcggacaccgtaaggccatac
atcgccgcaaagctgctctccctcccagacagcttcaccttgggcgacgagaagacgtac
tccggcttctacaaccggcccctttctaacagccaaaactaccagtgctttgtcatggcc
gaactcaaggaccaataccctgttgctgcaaatgagaagcagcggaccttctcagccagc
ccatactcggacctcatcatggtgacggatgaaaaccatatgcagcgcagtatggaccag
cctgagatgctttgggtcatgggccccgtgctcgccgtggtgctcatcatcatcatagtt
atcgctatcctgctcttcaagaggaagagggcatcccccctacctaaagatgatcattct
agtggtgtgaaggattgtcttctggccaactcgtctgatcctgtagaaatgaggagactc
aactaccagacaccaggaatgagagaacatcctcccatatctgtctgcgagttggcggac
cacatcgagcgactcaaggccaatgatgccctccgcttttcccaggagtatgagtctatt
gatccaggccagcagttcacatgggagaactccaacctggaggtcaacaagccaaagaac
cgttatgccaacgttattgcttacgaccactcgagagttgttctcacccccgtggacggt
gttccaggtagcgactacatcaatgccaactacattgacggctaccgtaagcagaacgcc
tacattgccacgcagggccctctgcctgagactctgagcgacttctggaggatggtttgg
gagcagagagccagtaccattgtcatgatgaccagactggaagagaagtccagggtgaag
tgtgaccagtactggcccattcgtggcacggagacttacggaatgatccaagtgaccatg
cttgacgctgttgagttggcaacctacagtgtgcgcacctttgccctttacaagaatggt
tctagcgagaaacgcgagctcaggcagttccagttcatggcctggccagaccacggagtg
cctgaataccccacccccatcctagccttcctgcgcagggtcaaagcctgcaaccctccc
gatgctggacccatggtagtgcactgcagtgctggagtgggccgcacgggctgcttcata
gtcattgatgcaatgctggagcgcatgaaacacgagaagacggtagacatttatggccac
gtcacatgcatgagagcccagaggaactacatggtgcagacggaggaccagtacatcttc
atccacgaggccctgctggaggccgccacctgtggaaacaccgaggtccctgcccgaaac
ctgtacgcccacatccagaagctcacccagccaccatctggagagaccgtcacagccatg
gagctggagtttaagagactcgccaactccaaagcccacacctcacgattcatcagcgcc
aacctgccctgcaacaagttcaagaaccggctggtcaatatcatgcctttcgagtccacg
cgggtgtgcctgcagccaatccgaggagtggagggatctgactacatcaatgccagctgc
atcgacggatacagacagcagaaggcctatatcgccactcagggccctctagcggagacc
acagaggacttctggaggatgttatgggagcacaattccactatagtagtaatgctgacc
aaactcagagagatgggacgggagaagtgccatcagtactggcctgcagagcgctctgcc
cgctatcagtactttgtggtggatcccatggctgaatacaacatgccccagtacatcctg
cgagagttcaaagtcacagatgccagggacggtcaatccaggaccattcgccagttccag
ttcactgattggccagagcagggagtgccaaaaaccggagagggattcattgatttcatt
ggccaagttcataaaaccaaggagcagtttgggcaggatggaccaatcactgtgcactgc
agtgctggagtgggaaggacgggtgttttcatcactctgagtattgtcctggagaggatg
agatatgagggtgtggtggatctgttccagacggttaagaccctgcgcacacaaaggcct
gccatggtgcagacagaggaccagtaccagctgtgctacagagccgctctggagtacctg
gggagcttcgatcactatgcaacgtaa
DBGET
integrated database retrieval system
