Rhinichthys klamathensis goyatoka (western speckled dace): 130095036
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Entry
130095036 CDS
T09701
Symbol
ints1
Name
(RefSeq) integrator complex subunit 1 isoform X1
KO
K13138
integrator complex subunit 1
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rkg03041
]
130095036 (ints1)
Spliceosome [BR:
rkg03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
130095036 (ints1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
INTS1_INTS2-bd
INTS1_RP2B-bd
INT1_R3
INTS1_R4
UNC45-central
HTH_RNase_II
Motif
Other DBs
NCBI-GeneID:
130095036
NCBI-ProteinID:
XP_056117653
LinkDB
All DBs
Position
Unknown
AA seq
2206 aa
AA seq
DB search
MNRPKPTSIRRPSNTKPSGHPPPGDFIALGAKSQGSEPKANPALLKPPSTVLPPDRKREA
SSSLPSSSSLSKRPKLSSTPPSALSRLAEVAAVDKRSISPSIKEPSVVPIEVSPAVLLDE
IEAAEGEGNDDRIEGVLCGAVKQLKMNRAKPDMTLYLSLMFLAKIKPNVFATEGVIEALC
SLLRRDASINFKAKGNNLVSVLACNLLMAAYEEDENWPEIFVKVYIEDSLGERIWVDSSH
CKTFVDNIQTAFTTKMPPKSMLLQTETGRSGGDLSAGNSPHPSTPDEDEGQTELLIAEEK
LSPEDDGQAMPRYEELAESVEEYVLDVLRDQLNRRQPMDNVSRNLLRLLTATCGYKEVRL
MAVQRLEMWLQNPKLTRPAQDLLMSLCMNCNTHGSDDMEVISNLIKIRLKPKVLLNHYML
CVRELLNAHRDNLGTMVKFVIFNELSNARNPNNMQVLHTVLQHSPEQAPKFLAMVFQDLL
TNKDDYLRASRALLREIIKQTKHEINFQSFCLGLMQERKEATYVDMEFKERFVIQVTDLL
TVSMMLGITAQVKEAGIAWDKGEKKTNFKTKGRNRRESGISTDLEALRSFQNQIAAIQRD
AVWWLHSVVPTISKVGAKDYVHCLHKVLFTEQPETYYKWDNWPPESDRNFFLRLCSEVPL
LEDTLMRILVIGLSRDLPLGPADAMELADHLVKRAAGVQSDDLDVLRVERIQLIDAVLNL
CTYHHPENIQLPAGYQPPNLAISTLYWKAWLLLLVVAAFNPQKIGLAAWDGYPSLKMLME
MVMTNNYSYPPCTVADEETKTEMINRELQISQKERQEILAFESHLAAASTKQTITENNSL
LLSQLTSLDPKGPPRRPPPLVLDQVKTLNQSLRLGHLLCRSRNPDFLLNIIQRQASSQSM
PWLADLVQSSEGSLDVLPVQCLCEFLLHDAADDSSSIDDEEEGESKEQRVKKRQRQQKQR
QLLGRLQDLLLGPKADEQTTCEVLDYFLRRLSSSQVASRVLAMKGLSLVLTEGGLRDGEE
RDQLMEEDSGDAELLPGYQWLLQDLPKLPLFDSVRGLTASALQQAIHMETDPQTISAYLI
YLSQHAPVEEQSLHNDLALDVARLIVERSTIMNCLFSKHSCRPESDAVLSALITIFSAYI
RRMRKTKEGEDLYSWSESQDQVFLRWTTGETATMHILVVHAMVILLTLGPPKGESEFYIL
LDIWFPDKKPLPTAFLVDTSEEALLLPDWLKLRMIRSEVARLVDAALQDLEPTQLLLFVQ
SFGIPVSSMSKLLQYLDQAVSHDPQTLEQNIMDKNYMAHLVEVQHERGATGGHTFHSLLS
ASLPSRRDSSEVNRAKVTVETPHGSVKMRAVSQVPAIGPEDDLTGILLQLFPLKVDPRWP
PPPVRPLSLSLQQTLAQEVLQARQGHIQQGGAAGRLLQALAALLNSAHAGALVMAMHHSH
TISCPLLRQLHLYQRLVSQDVGFSSLFFNAVVQMLTWLENSAVETGPLHSLLKSLAAQYS
HKHRITDVRTGFLHLAESLAYRRDSEVAARGIIASLRAGEKCNAEPELIRKVLQGLMEVK
SPYLEELLSLLMTIGTENGTPGNTAGPVAMVISLLLQETEERGVKIEVDSKITESKKPGS
CSGLLVDWLELLDPEVTSVCSDLQQKLLFAQNKVKSSGVSVAPSYRPYLLALLTHQSNWS
TLHQCISSLLNKHREQRLDPTSALDFLWACSHIPRIWQGRDQKTPQKRTEQFVLKLCSEE
LISLVDLILSESELSCRDSATSKSALDQVSCSLLQSRLPLLHSCLHSDLDNVKKVSEYLI
SCVKKWGDSIMSKRCQTLLLQIYLHFPEVIQHIRLPEATLSAEGAADGSTCKLDVLVHRL
ITLLADTGDSKSAENRVSDANLACRKLAVSHPVLLLRHLSMIAALLHGRIHLNLHEIRQQ
THLTFFGDVLAVLELLQPLVFLSDHQRALQDCLLSFIKVLQNFRRSSRMPIINKFVQFIQ
KYITHDAASAVPFLQKHSDVLQGLSTENPDLVQLKSLLAGLTLPVRSGSSESAAEDRDAE
DSSSGSLSLVNISASMPLTAADMTKCLKKISKGEAIEDVFDGLTEVDEKSKRNPEIIQYF
VNDLQRLMSSPEEVCRNMAFSLALRCIQNIPSMAAEFLPTFMYCLGSGNFDVVQTALRNL
PEYVLLCQEHADILLHKAFLVGIYGQIDTSSMIAESMKVLRMEATT
NT seq
6621 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgaccaaagccaacaagcattaggcgtcctagtaacaccaaaccatcaggtcac
ccacctccaggggatttcattgctcttggagcaaagagtcaaggcagtgagcccaaagca
aacccagctctcttgaagccaccgtccaccgttttgcccccagaccgcaagagagaggca
tcttcatccctgccctcttcctccagcctgtccaagcggcccaagctctctagtactcca
cccagtgccctctcacgcctcgctgaggtggctgccgttgacaaaagatcaatatcccct
tcaatcaaagagccatctgtagttcctattgaagtgtcccctgctgttcttctggatgag
atcgaggcagcggagggagagggtaatgatgaccgcattgagggtgttctctgcggggct
gtcaaacagctgaagatgaacagagccaagcctgacatgacgctgtacctcagcctcatg
tttctggccaaaatcaagcccaatgtatttgctacagagggtgtgatagaggctctctgc
agtttgctccgccgtgatgcctcaattaactttaaggccaaggggaacaacctggtgtcc
gtgctggcctgtaacctgttgatggccgcctatgaggaggatgaaaactggcctgagata
ttcgtcaaagtctacattgaggattctctcggtgagaggatctgggtggacagctcgcac
tgtaaaacatttgtggataacatccaaactgccttcacaacaaagatgcctcctaagagt
atgctgctccagacggaaacagggcggtcaggaggcgacctcagtgcagggaacagccct
catccttccactccagatgaagatgaaggtcagactgagcttctaatcgctgaagagaaa
ctcagtccagaggatgatggacaggccatgccaaggtacgaagagctggctgaaagtgtg
gaggagtacgtgttggatgttttgagggaccagctgaaccgtcgccagcccatggacaat
gtgtccaggaaccttttgcgtcttctcacggccacctgtggttataaagaggtccgactg
atggccgtgcagagactcgagatgtggttacagaatcccaagctgactcggccagcgcag
gatcttctcatgtctctgtgcatgaactgtaatacacacggctcagacgacatggaggtc
atctcgaacctcatcaagatccgcctcaaacctaaagttctactcaaccactacatgctg
tgtgtcagggaacttctaaatgcccacagagataatctgggcaccatggtgaagtttgtg
atctttaatgagttgtcaaatgccagaaatcccaataatatgcaagtcctccatactgtt
ctgcaacatagcccagagcaggcgcccaagtttctggcaatggtgttccaggacttgctg
accaataaggatgactacctgcgggcatcaagggccttgcttagggaaatcattaaacag
accaaacatgagatcaacttccagtccttctgtttaggcctcatgcaagagaggaaagag
gccacttatgtggacatggagtttaaagagcgttttgtcatccaagtgacagatctcttg
acggtgtccatgatgttggggatcacggctcaggtcaaagaggccggcattgcgtgggac
aaaggagagaagaagactaatttcaagaccaaaggccgcaataggagagagagcggcatc
agcaccgatctggaagcactgaggtcctttcagaaccagatcgctgccatccagcgagat
gctgtgtggtggctacactccgtggttcccaccatcagtaaagtgggagctaaagactat
gtgcactgtcttcacaaggtgcttttcacagagcagcccgagacctattacaaatgggac
aactggccacctgagagcgacagaaatttctttctccggctgtgctctgaggttcctctg
ctggaggacacactgatgcgcatcttggtgatcggtctctctcgtgatttgccccttggc
cctgctgacgccatggagctggccgatcacctggtgaagagagctgcaggagttcagtct
gatgacttggatgtgttgcgagtcgagaggatccagctcattgatgctgtgctgaacctt
tgcacctaccatcacccagagaacatccagcttcctgcagggtatcaacctcctaatctg
gccatatcaactctttactggaaggcctggctcctgctgcttgtggtcgcagcattcaac
ccacagaaaatcggtttggcagcatgggatggttaccccagtctgaaaatgctcatggag
atggttatgacaaataactactcctaccctccgtgcacggtggccgacgaggagaccaaa
acagaaatgatcaatcgagagctgcagatctctcagaaggagcggcaggagatcctggcc
tttgagagccacctggcagccgcctccaccaagcagaccataacagagaacaacagcctt
ctgctgtcccagctcaccagcctggaccccaagggacccccacgtaggccacctcctctt
gtcctggatcaagtgaaaactctgaaccagtctttgcgcctgggccatttgctctgccgc
agccgcaaccctgacttcctgctcaatatcatccagagacaagcctcctctcagtctatg
ccgtggctggctgatctcgttcagtctagtgaagggtcgttggatgtgctgcccgttcag
tgcctgtgcgaattcctcctccacgatgctgctgatgactcatcttccattgatgatgag
gaagaaggagagagcaaagagcagagagtgaagaaaagacagaggcagcagaaacagagg
cagcttcttgggcggctgcaggaccttctgctgggtcctaaggctgatgaacagaccaca
tgcgaggtcttggactacttcctgcgccgtctcagttcttctcaggtggcctctagagtg
ctggcaatgaagggtttgtctctggtgctgacggagggaggattaagagatggagaggag
agggatcagctcatggaggaggactcgggagatgcagagttattgccaggctaccagtgg
ctccttcaggacctccccaaactgcctctgtttgacagcgtgagaggcttgacggccagc
gccttacagcaggccattcacatggagaccgatcctcaaaccatcagtgcatacctgatt
tacctatcccagcatgcaccagtggaggagcagtccctacacaatgacctggccttggat
gtagctcgcctgatagtggaacgctccactataatgaactgcctgttctccaagcactcc
tgcagacccgagtctgacgccgtcctctccgctctgatcaccatcttctctgcctacatc
cgccgtatgaggaagacaaaagagggagaggacctctacagctggtcagagtctcaggat
caagtgttcctgcgatggaccacaggagaaacagccaccatgcacattctggtagtccat
gctatggtcatcctgctcacgctgggacctcccaaaggggaaagtgagttctatatactg
ctggatatctggtttcctgataaaaagccccttcctactgcattcctggttgacacgtct
gaggaggcccttcttttgcctgattggctgaaattacgaatgatccgttctgaggtcgcc
cgattggttgatgcagccctacaggatctggagcccacgcagctgctgttgttcgtccag
tccttcgggatccccgtctccagcatgagcaaactgctgcagtatctggaccaggccgtg
tcccatgatccccagacactggagcagaacatcatggacaagaactacatggctcatctt
gtagaagtccagcatgagagaggagccacgggaggacacacgtttcacagtttgctcagt
gcttcacttccttcacgcagagacagctcagaggtgaacagggctaaggttaccgttgaa
acacctcatggctctgtaaagatgagagcagttagtcaggtgccagcgatcggcccagag
gatgatctcactgggatcctactacagctcttccccctgaaggtggatcctcgctggcct
cctcctccggtccgaccactgtcattatctctgcagcagaccctggcccaggaggttctg
caggcacggcagggtcacatccagcagggtggcgctgccggacgactcctacaagcctta
gcagcccttctaaactccgcccacgctggagccctggtcatggcaatgcaccacagccat
acgatctcctgtcctctactgcgccaactccatctttaccagcggttggtgtctcaagac
gttggcttctcatcgctgttcttcaacgccgttgtgcagatgttgacgtggttggagaac
tccgcggtagagacggggccactccacagcctgctgaaatctctggcagctcagtactct
cacaaacatcgcatcacagatgttcgtacaggatttctgcacttggctgaatcactggcg
tatagacgagactctgaagtggcagcgaggggcattattgcctctctgagagctggagaa
aaatgcaatgctgaacctgaactcatacgaaaagtgttgcagggcctcatggaggtgaag
tctccatatctagaggagctgttatccctgcttatgaccatcggtacggagaatgggacc
ccaggaaacacagctggtcccgttgccatggtgatctctctgctgctacaggaaacagag
gaacgaggggtgaaaatagaggtggattccaaaatcactgagtcaaagaagcctggctcg
tgttcagggctgttggtggactggctggagttgctcgacccagaggtgacctccgtgtgc
tcggatcttcagcagaagctgctttttgctcaaaacaaggttaaaagcagcggtgtaagt
gtggccccctcctacaggccgtatctgttggccctccttacacaccagtccaactggagc
accttacatcagtgcatcagctctctgctcaacaaacacagagagcagagactggaccca
acctcagctctggacttcctgtgggcctgcagtcacattccccgcatctggcaggggcga
gatcagaaaactcctcagaagcgcaccgagcagtttgtgttgaagctgtgttctgaggag
ctcataagtctggtggacctcatcctgtctgagtcagagctgagctgtcgtgactcagcc
acctctaagagcgctctggaccaggtctcctgctctcttctccagtcccgcttgcccctc
ctgcacagctgtctccactcagacctggacaatgtaaagaaggtctctgagtacctcatc
agctgtgttaagaagtggggagacagtataatgagtaagaggtgtcagacgctgctgctg
cagatctacctgcacttcccagaggtcatccagcacatccgcctaccagaggccaccctg
agtgctgagggggcagcagatggcagcacctgcaagctggatgttctcgtgcatcgtctc
atcactctgctagctgacacaggagactccaaatcagccgagaaccgtgtgtctgatgcc
aatctggcctgcaggaaactggccgtatctcatccggtgcttctgctcagacacctgtcc
atgatcgctgcactcctgcatgggcgcatccatctgaacctgcatgagatcagacagcag
acccatctgaccttcttcggtgatgttctggctgtcctggagctgctgcagccgctggtt
ttcctctctgaccaccagagggcactgcaggactgtctgctgtcctttatcaaagtactg
cagaacttcagaagatcatcccgtatgccgatcataaacaaatttgtgcagttcatccaa
aaatacataacccatgatgcagcatccgctgtgcctttccttcagaaacactcagatgtg
ctacagggactatccactgagaatccagacctggtgcagctcaaatctttgctcgctgga
cttactctgcctgtgaggtctggttcctctgagagcgctgctgaggacagagacgcagag
gattcgtcctcaggctccctctctttggtcaacatctcagcctccatgcctctgactgca
gccgacatgactaaatgcctgaagaagatctccaaaggagaagcaattgaggatgtgttt
gacgggttgactgaagtggatgagaaatccaaaagaaatccagaaatcattcagtatttt
gttaatgatcttcagaggttgatgagttcccctgaggaagtgtgccgcaacatggcgttc
agtctggccctgcggtgcatccagaacatccccagtatggctgctgaattcctgccaacg
ttcatgtactgtctgggcagcggcaactttgatgtagtgcagacggccctgaggaacctg
cctgaatatgtgctgctctgtcaagaacatgctgatattctcctccataaggcattttta
gtgggcatctacggtcagattgacaccagttccatgatagcagaatccatgaaggtctta
cgcatggaggcaacgacatag
DBGET
integrated database retrieval system
