Rhinichthys klamathensis goyatoka (western speckled dace): 130095213
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Entry
130095213 CDS
T09701
Symbol
tnfaip3
Name
(RefSeq) tumor necrosis factor alpha-induced protein 3
KO
K11859
tumor necrosis factor, alpha-induced protein 3 [EC:
3.4.19.12
]
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg04217
Necroptosis
rkg04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
130095213 (tnfaip3)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
130095213 (tnfaip3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rkg01002
]
130095213 (tnfaip3)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rkg04121
]
130095213 (tnfaip3)
Enzymes [BR:
rkg01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
130095213 (tnfaip3)
Peptidases and inhibitors [BR:
rkg01002
]
Cysteine peptidases
Family C64
130095213 (tnfaip3)
Ubiquitin system [BR:
rkg04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
OTU
130095213 (tnfaip3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-A20
OTU
DUF3915
zf-BED
Motif
Other DBs
NCBI-GeneID:
130095213
NCBI-ProteinID:
XP_056117876
LinkDB
All DBs
Position
Unknown
AA seq
782 aa
AA seq
DB search
MSQGQNFLPKFLFVSNLLKAVKIRERVPNDVVKPSSSSGLIHHLRSMHRYTLEMIRMSQF
PQAFREVIQAAILDRAMQSSLEQEKRLNWCREVKKLVPLRTNGDGNCLLHAASQYLLGVQ
DTDLVLRKALYAVLKETDTSNFRTRFQTELLHSQEFTQTGLRYSTLNWEEEWVKIVEMAS
PVSSSNGLQFDSLEDIHIFVLSNILRRPIIVIADQVLRSMKSGSSFSPLNVGGIYLPLHW
PPGECYKYPIVLGYDSQHFAPLITIKDSGPEIRAVPLINPGRGGFEELRLHFLTEKEQQQ
KEKLLKDYLMLIEIPVIGLGYDPTQIITAARLDEGNLPEDMNLMEDYLQLVNHEYKRWQE
DKESSWAPQSQRPPPFSVSQLSLIEIRCATPRCTFYVSVDTQPHCHECFEKRQAGRKPEA
ISSSNHSSSSDPESRGRLERSVLPSPRSAPPTAPSLSLYSETHAMKCKTPGCLFTLSVEH
DGLCERCFTARQNRSAANRPSHGWCHGQWAQGGREREKETERERERERERDTERCVLCRQ
EVFRIFNGLCPPCMQRTAVSERGDAQQEEPSTEASVWATHRETERTGTTGHTWQTPAARS
CKRSGCQFFGTAEKLGFCTICYLDYQTNHQATPAIVQPRHTSEAGFQNCPRCRGQGCGAE
GKAMLEGYCNKCFVKEQSARLNQAASRGSNSPPLVTRASKPRPPPVLTQAQCRRSGCKNL
SPGCTELCPDCITRGQREGRRAQAPKEKSKQRCKTQGCDHYANQEKQGYCNECDHFKQIY
RG
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atgtctcagggccagaacttcctgcccaagttcctgttcgtgagtaacctcctgaaggcc
gtgaaaatcagagagcgggttcccaatgacgtggtcaagccttcgtccagcagcggcctg
atccatcacctgcgcagcatgcatcgctacaccctggagatgatccgcatgagccagttc
ccgcaggccttccgcgaggtcatccaggcggccatcttggacagggccatgcaaagctcg
ctggagcaggagaagaggttgaactggtgccgtgaggtcaagaagctggtgccgctgaga
accaatggtgatggaaactgcctgcttcacgcagcctctcagtatctactaggggttcag
gacacagacctggtgctcagaaaggctctttacgcagtactgaaggaaacagacactagt
aactttaggacacgctttcagacagagcttctgcactcgcaggagttcacccagaccggc
ctgagatacagcactttgaactgggaggaggaatgggttaagattgtagaaatggcttct
ccagtgtccagcagtaatggcctacagtttgactctttagaggatattcacatatttgtg
ctttcaaatattctacggaggccaattattgttattgcagaccaagtacttagaagtatg
aagtctggttcctccttttcacccctcaatgtggggggcatatacctgcctttgcattgg
cctcccggagaatgctacaaatatcccatagtgcttggatatgactcccagcactttgca
cccctgatcacaatcaaagatagtggcccagagatccgtgcggtgccgctgataaacccg
ggacggggagggtttgaggagcttcgattgcacttcctgacagaaaaggagcagcaacag
aaggagaagttgctaaaagactacctaatgcttatagaaatccctgtcattggcctgggc
tacgatcccacacagattatcactgcggccagacttgatgaaggcaacctacctgaggat
atgaacctgatggaggactacctacaactggtaaaccatgaatataagcgctggcaagag
gataaggagtcatcatgggccccccaatcccagcgtccccctcccttctcagtctcacaa
ctctctctcatcgagatccgctgcgccacaccccgatgcaccttctacgtctcggtggac
acccaaccccactgtcacgagtgcttcgaaaagcggcaggcggggcggaaaccagaggcc
atttccagctcaaatcattcgtcgtcctcggacccggagagccgagggagactggagcgc
tcggtccttcctagccctcgttctgctccccctacggccccaagtctaagcctttacagt
gagactcacgccatgaagtgcaagacacccggatgcttgttcacactcagtgtggagcac
gacgggttgtgtgaacgctgctttacggcgaggcaaaaccggtccgctgccaacaggccg
tctcacggatggtgccacggtcagtgggcgcaaggcggccgggaacgagagaaggaaacg
gagagggaaagagaacgagaacgagaaagggacaccgagagatgcgttctgtgtcgacag
gaggtttttaggatattcaatggtctttgcccgccctgcatgcagaggactgctgtttcc
gagaggggagatgcccagcaagaggagccttcgactgaagcctcggtgtgggcaacgcat
cgggagaccgaacgcacgggcaccaccggacacacctggcaaacgcctgccgcccgttcc
tgtaaacgctccggatgccagttcttcgggacggcagagaagctgggattctgcactata
tgttatctagactaccagaccaatcaccaggccacccctgctattgtccagcccaggcac
acgtccgaggcgggtttccagaactgtccacggtgccgaggtcagggatgcggggccgag
ggaaaggccatgctggagggttactgcaacaagtgcttcgtgaaggagcaaagcgctaga
ctcaaccaagctgctagcaggggctctaactccccacctcttgtcacgcgggcctcgaaa
ccacgtccaccgccagtgctcacccaggctcagtgtcggcgtagcggttgtaagaacctg
tcccctggttgcacagagctgtgcccggactgcatcacccgaggccagcgagagggtcgg
cgtgcccaggcgcccaaagagaaaagcaaacagcgctgcaagacgcagggctgcgatcac
tacgccaatcaagagaaacaaggctactgtaacgaatgtgaccacttcaagcagatttac
cgaggctga
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integrated database retrieval system
