Rhinichthys klamathensis goyatoka (western speckled dace): 130096514
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Entry
130096514 CDS
T09701
Symbol
rb1
Name
(RefSeq) retinoblastoma-associated protein
KO
K06618
retinoblastoma-associated protein
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg04110
Cell cycle
rkg04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
130096514 (rb1)
04218 Cellular senescence
130096514 (rb1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
rkg01009
]
130096514 (rb1)
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rkg03000
]
130096514 (rb1)
Protein phosphatases and associated proteins [BR:
rkg01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
130096514 (rb1)
Transcription factors [BR:
rkg03000
]
Eukaryotic type
Other transcription factors
Pocket domain Rb
130096514 (rb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rb_C
RB_A
RB_B
DUF3452
TetR_C_15
Motif
Other DBs
NCBI-GeneID:
130096514
NCBI-ProteinID:
XP_056119007
LinkDB
All DBs
Position
Unknown
AA seq
902 aa
AA seq
DB search
MPPKKRSSGTPQKKDFKGNTKSESPDSSENAVLSPERHKDKDSEFVSLSEELHATNLVCD
HAWRIWEREIRPMEKANMAYSNRQQWGACLFIAGMELEGISLTFTQFLKVVGLSVKQFIS
LVRKMDVNVDTISPKVNTAVTRLEKKYDVTFALYQRFVKTFEKIFAEPDKEKRKELWESS
WTLFLLAKGTFLQMEDDLVIAFQLLLCVLEFFTKRFTPSLLQSPYKSVVSSSTLSPLTRA
SRRNQGKTKPRPLEMDMQLLETLCKEGNCSVDEVKNVYQTTFCAFLDSVGLSGLQGLPPM
ETLSKQYEELYHKNKDFDARLFLVDDETLSPNKIEVSKVEVTPRKNFPGEDVVIPVPQTP
IRAAMNSIQQLRVDLTSASDQPSSNLLVYYKNCTVDPSEEIRKRVEELGQVFIQRFAQAV
GQHCEGLGRKRFNLGAQLYYKVMESMLKSEEKRLSVQNFSKLLNNAAFHTSLLACALEVV
MATYVGNSLKNGGFGSSGASDSIETDLCFPWILDVFQLPAFNFYKVIESFIKAEPTLKHD
MMKHLEQCEHVIMESLAWRADSPLFDLLKQSREEGSGEQAEPPATLNQPLHHNHTAADLY
LSPVRPSRRPPSAEAEPPTPGTKAPRSNSLSLFYKKLYRMAYLRLKTLFSHLLTSHPELE
PIIWTLLQHTLQNEYELMQERHLDQLIMSAMYAICKVKNVDLRFKTIVTAYKELPNTNQE
TFKRVLIREGQYDSIIVFYNLVFMQKLKTNILQYSSPRPPPLSPIPHIPCSPYKNSPLRV
PGSNNVYVSPLKSSRMSPVPMTPRSRILISIGESFGSADKFQKINQMVSSTDWSLKRSLD
GGAAPKPLKRLRFDMDGQDEADGSKSSGESTLIQKLAEMSSTRTRMQEQKLKEESVKEHP
EP
NT seq
2709 nt
NT seq
+upstream
nt +downstream
nt
atgccgccgaagaagcgcagcagcgggaccccgcagaagaaagacttcaaagggaacacg
aagagcgaatctccggacagtagcgagaacgcagtgctgagccctgaacgacacaaggac
aaggactctgaattcgtgtctctcagtgaggagctccatgccacaaatctcgtctgtgat
catgcatggagaatttgggagagggagatcaggccgatggaaaaggcaaatatggcgtat
tcgaacagacagcagtggggagcttgtctgttcattgctggcatggagcttgaaggcatc
agcctcaccttcacacaattcctaaaagtggttggactgagtgtgaagcagttcatcagc
cttgtgaggaagatggatgtaaatgtggacacaataagccctaaagtgaacactgctgtg
acacgactggagaagaaatatgatgtgacctttgccctctaccaaagatttgtgaagact
tttgaaaaaatcttcgcagagcctgacaaagaaaagagaaaagagctttgggaaagcagt
tggaccttgttcctcttggccaagggaacatttctgcagatggaggatgaccttgtgata
gccttccagttgctgctgtgtgttctggagttcttcaccaagcgtttcactccttctctc
cttcaatcaccctacaagtcagtggttagttcatccaccttgagtcctctgaccagggca
tcccgacgtaatcagggcaaaaccaaaccccgtccactagagatggacatgcagttgctg
gagacactgtgcaaggagggcaattgcagtgtggatgaggtgaaaaacgtgtaccagacc
actttctgtgcgttcctggactctgtgggtctgtcaggactccaagggcttcctcctatg
gaaacactttccaagcagtatgaagagctgtaccacaaaaacaaggactttgatgccagg
ttgttcttggttgatgatgaaactctttcccccaacaaaatagaagtgtcaaaggtggaa
gtgactccaagaaagaattttccaggcgaggatgttgtaattccagttccacagacccca
atcagagctgcaatgaactccatacagcagctcagagttgatctcacctcagctagtgac
cagccctcaagcaatctcctagtctattacaagaactgcactgttgacccatcagaagag
atcagaaagagggttgaggagctgggccaggtcttcatccagaggtttgcacaggctgtg
ggccagcactgtgagggactggggagaaagcggtttaatcttggtgcccaactctactac
aaagtcatggagtcaatgcttaaatcggaggagaagagattatcagtgcagaatttcagt
aaacttctcaacaatgcagcatttcatacctcattgcttgcatgcgccctggaagttgta
atggcaacttatgttgggaactccttaaaaaatggaggttttggcagctcaggggccagc
gattccattgaaactgatctgtgcttcccctggatcttggacgtcttccagctgcctgct
ttcaacttctacaaggtgatagagagcttcatcaaagccgagcccaccctgaagcatgac
atgatgaagcacctggagcagtgcgaacatgttatcatggagagccttgcgtggagagcg
gactctcctctctttgacctcctcaaacagtctcgtgaggaaggatctggtgaacaagca
gagccccccgcaacattgaaccaacccctgcatcacaaccacaccgctgctgacctgtat
ctctctcctgtgcggccgagccgtcgacccccgtcagcagaggctgagcccccaacacca
ggcaccaaagcaccccgttcaaactctctgagccttttctacaaaaagttgtacaggatg
gcctacctgcgactgaaaacgctgttctcgcacctgctgacctcacacccagaactggaa
cctataatatggaccctgcttcagcacaccctccagaacgagtacgaattaatgcaagag
agacacttagaccagttgatcatgtcggctatgtatgccatatgcaaggtgaagaacgtt
gacttgcgcttcaaaactattgtgaccgcttataaagagctgcccaatactaatcaggag
acatttaagcgtgtgctgatcagagagggtcagtacgactccatcattgtcttctacaat
ctggtcttcatgcagaagctcaagactaacattcttcaatattcctctcctcggccgccg
cctctgtctcccattcctcacatcccctgcagcccctataaaaactctcctctgcgcgtg
cccggcagcaataacgtctacgtctccccattgaaaagcagccgcatgtcccctgtaccc
atgaccccacggagcagaattcttatatctatcggcgaatcctttgggtctgcagacaaa
tttcagaagatcaatcagatggtcagcagcactgattggtccctcaagaggagtctggat
ggaggcgccgcccccaaaccccttaagagattgcgctttgacatggatggacaagatgaa
gctgatggaagcaaatcaagtggcgagtcaacgctgatccagaagctggctgagatgagc
tcgacacgtactcgtatgcaggaacagaaactgaaggaggagtctgttaaagagcatcca
gagccctaa
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