Rhinichthys klamathensis goyatoka (western speckled dace): 130099645
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Entry
130099645 CDS
T09701
Symbol
sharpin
Name
(RefSeq) ranBP-type and C3HC4-type zinc finger-containing protein 1
KO
K20894
shank-associated RH domain-interacting protein
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg04217
Necroptosis
rkg04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
130099645 (sharpin)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
130099645 (sharpin)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rkg04121
]
130099645 (sharpin)
Ubiquitin system [BR:
rkg04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
LUBAC complex
130099645 (sharpin)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Sharpin_PH
Zn_ribbon_RanBP
ubiquitin
PH
Tox-ART-HYE1
Motif
Other DBs
NCBI-GeneID:
130099645
NCBI-ProteinID:
XP_056121371
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All DBs
Position
Unknown
AA seq
400 aa
AA seq
DB search
MAVSSGCSSTVLMSVRVSVRPLSVGSDSLRLQLSMNANRAGLFTLTLRHTDRGGRSVSLA
EFDLRSVKYEITSTRCHELRLTKPPHDCLTFTFRSEQEAQEWATVMMSSLRETHRVAKMS
HASHDGLQYMKCEEKNSVLSLSMKEELCIELSRAIETGDTHAAVHYASDLARQQIAVTIQ
PALRDAEDREISLAVVVEDASSSCCVTVKVHPQVTVASLKQQMFVEYGFHPRVQRWVIAQ
CLCSDGRSLASYGIYRDSDTAFLYLLSARHACLDNQQDQENGLPTPTVAPPLNAALAHTP
AISHDWRGYSTLPPRFSHSSTGSSGCGPEKHSVSDIINLEMLQLGRSKLKSSNTQLGWSC
PSCTFINKSTRPGCEICSTDRPNPPNPSSVQQEKARRSNQ
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atggccgtgagctcgggctgcagtagcacggtgttgatgtcggtgcgggtgtcggttcgg
ccgctcagtgtgggctcggattcactgcggctgcagctcagcatgaacgcgaaccgcgcg
ggactcttcacgctcacgctcagacacaccgaccgcggaggacgcagcgtgtctctagca
gagtttgatctacgctcagtgaagtacgagatcacgtcgactcgatgtcacgaactgcgt
ctcaccaagccgccccacgactgtctcacgtttaccttccgcagcgaacaggaggcccag
gaatgggcaactgtcatgatgtcatcactgagggagacacacagagttgccaaaatgtcg
catgcctcacatgatggactgcagtatatgaagtgtgaagagaaaaactctgtcttgtcg
ctgtcaatgaaagaggagctgtgtatagagctttctcgagcaatagagaccggagatact
cacgcagccgtgcactacgcctcggatctggcccggcagcagatcgccgtgactattcaa
ccagcgctgcgggacgctgaggacagagagataagcttagctgtggtagtagaagatgca
tcatcatcctgttgtgtcacagtaaaagtccacccgcaggtgactgtcgcttctctgaag
cagcagatgtttgttgagtatggttttcaccccagggtgcagcgctgggtgatcgctcag
tgtctgtgctccgatggccgttctttagcgtcgtacggcatctacagggacagtgacaca
gcatttctctacctcttgtctgcccgtcacgcctgcctcgataaccagcaggaccaggag
aacggcctcccgacaccgactgtagcgccgccactaaacgccgcgctggcccacacgccg
gccatcagccatgactggagaggctacagcacgttaccgccccgcttcagccacagcagc
acaggcagcagtgggtgtggcccagagaaacatagcgtcagtgacatcattaaccttgag
atgttgcaacttggacggtccaaactgaaatcaagtaacacgcagctaggctggtcctgc
ccttcctgtacattcataaataagtctacgcgacccggctgtgaaatctgcagcacagat
cggccaaaccctcccaatcccagtagcgttcaacaggaaaaagcaagaagatctaaccag
tga
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