Rhinichthys klamathensis goyatoka (western speckled dace): 130100580
Help
Entry
130100580 CDS
T09701
Symbol
pbx1b
Name
(RefSeq) pre-B-cell leukemia transcription factor 1b isoform X1
KO
K09355
pre-B-cell leukemia transcription factor 1
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
130100580 (pbx1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rkg03000
]
130100580 (pbx1b)
Transcription factors [BR:
rkg03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
130100580 (pbx1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PBC
Homeobox_KN
Homeodomain
DUF7260
UCH
Motif
Other DBs
NCBI-GeneID:
130100580
NCBI-ProteinID:
XP_056122041
LinkDB
All DBs
Position
Unknown
AA seq
446 aa
AA seq
DB search
MDEQPRLMHAHTAVGMSGHPGLSQHIQDNTGANDGDGRKQDIGDILQQIMTITDQSLDEA
QARKHALNCHRMKPALFNVLCEIKEKTVLSIRGAQEEEPPDAQLMRLDNMLLAEGVSGPE
KGGGSAAAAAAAAASGGVGADNSAEHSDYRAKLSQIRQIYHTELEKYEQVSKPAKANSQI
PMLNNMACNEFTTHVMNLLREQSRTRPISPKEIERMVGIIHRKFSSIQMQLKQSTCEAVM
ILRSRFLDARRKRRNFNKQATEILNEYFYSHLSNPYPSEEAKEELAKKCSITVSQVSNWF
GNKRIRYKKNIGKFQEEANMYAARTAVSAASVSTHGSQANSPSTPNSAGSAGSFSMSNSG
DLFMSVQSLNGDSYQGSQVGANVQSQVDTLRHVISQTGGYSDGLAANQMYSPQGINANGG
WQDPTTPSSVTSPTEGPGSVHSDTSN
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atggacgagcagccgcgcctgatgcacgctcatacggccgttgggatgagtggacacccc
ggcctgtctcagcacatccaggacaacaccggagcgaacgacggagacgggagaaagcag
gacattggagacattttacaacagatcatgaccatcactgaccagagtctggacgaggcg
caggccagaaaacatgcgctcaactgccaccgaatgaagccggcgctcttcaacgtcctg
tgtgagatcaaggaaaaaacagtgttgagtatccgtggcgcgcaggaggaggagcctccc
gacgcccagctgatgcgattggacaacatgctcctggcggagggcgtgtccgggccggag
aaaggcggcggatccgcggcggcggcggcagcggcagcggcttcgggaggagtcggggcc
gataactcggcagaacactccgactacagagccaaactctcccagatccgccagatctac
cacaccgagctggagaaatacgaacaggtcagcaagcctgcaaaagccaacagccaaatt
cccatgctgaacaacatggcgtgtaacgagttcacgactcatgtgatgaacctgctgagg
gaacagtctcgcacacggcccatctcgcccaaagagatcgagcgcatggtgggcatcatc
caccgcaagttcagctccatccagatgcagctgaagcagagcacctgtgaggcggtgatg
atcctcaggtcccgattcctcgacgccaggaggaaaagacgaaacttcaacaaacaggcc
acggagatcctgaatgaatatttctactcccatctcagtaacccgtatcccagcgaagag
gccaaagaggagctggccaagaaatgctccatcacagtctcgcaggtgtccaactggttc
ggaaacaaaagaatccgatacaagaagaacatcggaaagttccaggaagaagccaacatg
tacgccgccagaacggctgtgagcgcagcgagtgtgtccacacacggcagtcaggccaac
tcaccatccaccccgaactcagcaggttctgctggctcttttagcatgtcaaactctggc
gatttgtttatgagtgttcagtctctgaacggggactcgtaccagggctctcaggtggga
gccaatgtgcagtcacaggtggatacccttcgccatgttatcagccagacaggaggatac
agtgacggcctcgcagcaaaccagatgtacagtccgcagggcatcaatgcgaacggtggc
tggcaggaccccaccaccccctcctccgtcacctcccccacagaaggacccggaagcgtt
cactccgacacctccaactga
DBGET
integrated database retrieval system
