Rhinichthys klamathensis goyatoka (western speckled dace): 130101075
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Entry
130101075 CDS
T09701
Symbol
pdgfbb
Name
(RefSeq) platelet-derived growth factor subunit B
KO
K04359
platelet-derived growth factor subunit A
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg04010
MAPK signaling pathway
rkg04020
Calcium signaling pathway
rkg04510
Focal adhesion
rkg04540
Gap junction
rkg04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
130101075 (pdgfbb)
04020 Calcium signaling pathway
130101075 (pdgfbb)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
130101075 (pdgfbb)
04540 Gap junction
130101075 (pdgfbb)
09142 Cell motility
04810 Regulation of actin cytoskeleton
130101075 (pdgfbb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
rkg04052
]
130101075 (pdgfbb)
00536 Glycosaminoglycan binding proteins [BR:
rkg00536
]
130101075 (pdgfbb)
Cytokines and neuropeptides [BR:
rkg04052
]
Cytokines
Growth factors (RTK binding)
130101075 (pdgfbb)
Glycosaminoglycan binding proteins [BR:
rkg00536
]
Heparan sulfate / Heparin
Growth factors/receptors
130101075 (pdgfbb)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDGF
PDGF_N
Motif
Other DBs
NCBI-GeneID:
130101075
NCBI-ProteinID:
XP_056122588
LinkDB
All DBs
Position
Unknown
AA seq
412 aa
AA seq
DB search
MRSRIPLLLAVLAAACLRFGSAEADPLPAAVVELVKGGSVSSIQDLQFLLFSESIEVEPD
SHHENDTSNRLPRSLLDAQPAQQAICKVRTEVIEVTRSMLDRSNANFLLWPPCVEVQRCS
GCCNTKSLQCVPVLTHTRYLQVMKIQYVNKRPLYDKAVVSVLDHVECRCQPAPRPAQRRK
SSGQKQDARDRLGKTRPKDELHRSDELKHNQRLSLEDLLSHSWLPKERFSESGAPDTFHF
GRDGWARNETQYGGGKSNHRHPADGRRHGNTNGTSSAEGTTAPLPNHTEQEETDSSLHNA
TQFESQSNANQSTTNQTSEYNMGPLTNQTFKHQSNLTQEIEQLRTTNRTDQLAFNATGTA
SQNLGDVEENGPNVRGETTDVEAKEVEREQRQMDRKAKEGEEVVVVEDLLLQ
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgagatcgcggatcccgctacttctcgcggtacttgcggcggcgtgtctgcggtttggc
agtgcggaggccgatcctctcccggctgctgtggttgagttggtgaagggtggatctgtg
tcttctattcaggacttgcagtttctactgttttctgaatccatagaggttgagccagac
agtcaccatgaaaacgacaccagcaaccgtctgccacgcagtcttctggatgctcagccc
gctcagcaagccatctgtaaggtcaggaccgaggtcatcgaggtcacacgctccatgttg
gaccgtagcaatgcaaatttcctgttgtggcctccgtgcgtggaggtgcagaggtgctcg
ggctgctgtaacaccaagagcctgcaatgtgttcctgtacttacacacacacgataccta
caggtgatgaagatacagtacgtgaacaagcggccgctctacgataaggccgtcgtctcc
gtcctcgaccatgtagagtgccgctgtcagccggctcctcggcctgcccagcggcggaaa
tcatccggccaaaaacaggatgcacgggatcgtttgggaaaaactcgacccaaagatgag
ctccatcgcagtgatgaactcaaacataaccagaggttaagcctggaggacctgctcagc
cacagttggctgcccaaagagaggttctctgaatcgggagcaccagacactttccatttc
ggccgtgacggctgggctcggaacgagacgcagtatggagggggtaaaagtaatcaccgt
caccctgcggacggaaggagacacggcaacacgaatggcacatcatcagcagagggaaca
acggctccactgccgaatcataccgagcaggaagaaactgattcgtcactgcacaacgct
acgcaatttgaatcacagagtaatgccaaccaaagtacaaccaatcagacatctgaatat
aatatggggccattaaccaatcagacttttaagcaccagtcaaacctcacgcaagaaata
gaacaattgcgaacaaccaatcggacagaccaacttgctttcaatgccacaggaacagcc
agtcagaatctgggagatgtagaggagaatggtccgaacgtgagaggtgagactacagac
gtagaggcgaaggaggtggagcgagagcagagacaaatggacagaaaggccaaggagggg
gaggaggtggtggtggtggaagacttgctgcttcag
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