Rhinichthys klamathensis goyatoka (western speckled dace): 130101256
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Entry
130101256 CDS
T09701
Name
(RefSeq) rap guanine nucleotide exchange factor 4-like isoform X1
KO
K04351
Rap guanine nucleotide exchange factor 4
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg04081
Hormone signaling
rkg04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
130101256
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rkg04131
]
130101256
Membrane trafficking [BR:
rkg04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
130101256
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RasGEF
cNMP_binding
DEP
RasGEF_N
RA_2
RA
Motif
Other DBs
NCBI-GeneID:
130101256
NCBI-ProteinID:
XP_056122882
LinkDB
All DBs
Position
Unknown
AA seq
1021 aa
AA seq
DB search
MRASRRDLRFTPVEPKMVAVHTSAHSVASSEWIICLDKRPAERSGEDVDIILARLKGVKA
FEKFHPNLLQQICMCGFYEFLEKGITLYRQGDIGTSWYAVLSGSLDVKVSETANHQDAVT
ICTLGVGTAFGESILDNTPRHATIVSRENSELLRIEQREFKTLWEKYRQCMAGLLAPPYG
VMDSGATNDRMPDKENLNSDPLNFMSKNLNKVPSEKILRAEKVLRNAILARAPHMIRDRK
YHLKTYRQCCVGTELVDWLLQQSSCVHSRAHAVGMWQVFLEEGVLNHVDHELSFQDKYLF
YRFLDDEEEDAVLPSEDEKREAEEELQETLLFVSQIGPDAHMRMILRKPPGQRTAEDLEI
IYDELLHIKALSHLSNTVKRELAGVLIFESHAKAGTVLFNQGEEGTSWYIIQKGSVNVVI
YGKGVVCTLHEGDDFGKLALVNDAPRAASIVLREDNCHFLRVDKEDFNRILRDVEANTVR
LKEHDLDVLVLQKSLRPSSHGNIPAHFKYTVMSGSPEKILEHLLETMRLDIHFSDPDPTL
DDFVLMHCVFMPNSQLCPALVAHYHSQASQGSEQERLDYAVASKRRVFSLALRWAALQGH
HLLEDDTTLSFLEELHGFVSNDARVLRPLKELLPELERIIKHYPDDARTSQKKLKVLLRQ
FSSGEERLAKKQPMRSFDDILLKVYCSDHTYTTIRVSVLATGREVTAAVADKLGSTEELL
LINLSASGEKQILKPNDVSVFQSLGVNGRLFVCSREQLDSLNPLPEQEGPSTGSMSSFEL
MSSKDLAFQMTQYDWELFSCVHEYELVYHTFGRQAYRRSTANLELFLRRFNQVQLWVVTE
VCLCGTLSKRVQLLKKFIKIAAHCREFKNLNSFFAIIMGMCNPAVSRLSQTWEKLPSKFK
KFYAEFESLLDPSRNHRAYRLTVAKMEPPIIPFMPLLIKDMTFTHEGNKTFIDGLVNFEK
MRLIANTVRAVRHCRSQPFNAEALPASKNPQEVRNYVRQLNVIDNQRTLSQLSFRLEPRR
G
NT seq
3066 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgcgagtcgaagagatctgcgattcacaccggtcgagccgaagatggtagcggtg
cacacctctgcgcactccgtggcctcctccgagtggatcatctgcctggacaagaggcca
gcagaacgctcgggagaagatgtggatataatcctggctcggctgaagggtgtgaaggcc
tttgagaagtttcacccaaacctactgcagcagatctgcatgtgtggcttctatgagttc
ctggagaaaggcatcaccttgtataggcagggtgacatcggcaccagctggtacgcggtt
ctgtctggatctctggatgtgaaagtgtctgagacagccaaccatcaggatgctgtaacg
atctgtactttgggagtgggaacagcatttggggagtcaattctggataacactcctcga
catgccacgatcgtcagccgagagaacagtgaacttctgcgcatcgaacagagggagttc
aaaaccctgtgggagaaatacaggcagtgcatggcagggcttctcgctccgccgtacgga
gtgatggacagtggggctacaaatgacagaatgccagacaaagagaatctaaacagcgac
cctctcaattttatgtccaaaaacctgaataaggtcccatcagaaaagattttgagggct
gaaaaagtcttacgtaatgctatactggctagagctccccacatgatcagagatagaaaa
tatcatctgaaaacctacaggcagtgttgtgtcggcacggagctggtcgactggctgctt
cagcagagctcatgtgttcacagtcgagctcacgctgtgggaatgtggcaggtgttcctg
gaggaaggggtcctgaatcacgttgaccatgagctcagctttcaagataagtaccttttt
tatcgtttccttgatgacgaggaagaggatgcggtgttgcctagcgaagacgagaaacgt
gaagctgaggaagagctgcaggagaccctcctcttcgtctctcagatcggccctgacgca
cacatgcgaatgatcctcaggaaaccgccaggtcaaagaacagctgaagacctagagatt
atttacgatgagctgctgcatatcaaagcactctctcatctatctaacactgtgaagaga
gagctcgctggggtcctcatctttgagtcgcatgccaaagcaggcactgtcttgtttaat
caaggggaggaaggcacttcttggtatattatccagaagggatcggtaaatgttgttatc
tatggcaagggtgtggtgtgtacgctgcatgaaggggatgattttgggaaactggccctg
gtgaacgacgccccccgcgctgcgtccatcgttctgagagaggacaactgccacttcctg
agagtggacaaagaggacttcaaccgtatactcagggatgttgaagcaaacacagtgcgt
ctaaaagagcatgacctggatgttctggtactacagaagagtctccggccctccagccat
ggaaacatcccagcccacttcaaatacactgtgatgtcaggcagcccagagaagattcta
gagcatctgcttgagacaatgcgactggacattcatttctctgacccagatccgactctg
gatgattttgtgctcatgcactgtgtcttcatgcccaacagccagctgtgccctgccctt
gtggctcactaccactctcaggcgtctcagggctcagagcaggagcgtctagactacgct
gttgccagcaagagacgggtgttcagcttggctctgcgctgggctgccctgcagggccac
catctgctggaggatgacaccacgctcagctttctggaggagctgcatggcttcgtatct
aatgacgcaagagttttgcgtccactgaaggagctactgcctgagcttgagaggatcatc
aaacattatccagatgatgcacgaacctcccaaaaaaagcttaaagtcctcctgcgacag
ttcagctctggagaggaaaggcttgcaaaaaagcagccaatgaggagctttgatgacatt
ctcttgaaggtttactgcagtgatcacacttacactactattcgtgtttctgtgctggcc
acggggagagaggtgaccgcagctgtagcggataaactgggatcgactgaagagctgctt
ttgataaacctcagcgcatctggagaaaagcagattttaaagcccaatgatgtatcagtg
tttcagtcgctgggagtgaacggacgattgtttgtctgctccagagaacagctcgattca
ctgaatccgcttccagagcaggagggtccctccacagggtctatgtccagttttgagctg
atgagctctaaagatctggccttccagatgacccagtatgactgggagcttttcagctgt
gtacatgagtatgagctggtgtatcatacgttcggacggcaggcatacagacgctccact
gcaaatctggagctgtttctgaggcgctttaatcaggtgcagctgtgggtggtcacagag
gtctgtctgtgcgggacgctcagcaaacgggtacagctgctcaagaagttcatcaagatt
gccgcccactgtagagagtttaagaatctgaactctttcttcgccattatcatgggcatg
tgcaacccagccgtgagcaggctcagccagacgtgggagaaactacctagtaagttcaag
aagttctacgcagagtttgaaagtttgcttgatccatccaggaatcaccgcgcataccgc
ctcactgtggctaagatggagcctccaatcattccctttatgccccttctcattaaagac
atgacattcactcatgaggggaataagacttttattgatggactggtgaactttgagaag
atgcggctgattgcaaacacagtccgggcggtgaggcactgcaggagccagccctttaat
gccgaggcattgccagccagtaagaatccacaggaagtgaggaattacgtacgtcaattg
aatgtgattgacaaccagagaaccttatcccaactgtccttcagactggagccaagacgg
ggctaa
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