KEGG   Rhinichthys klamathensis goyatoka (western speckled dace): 130102042
Entry
130102042         CDS       T09701                                 
Name
(RefSeq) H-2 class II histocompatibility antigen, A-U alpha chain-like
  KO
K06752  MHC class II antigen
Organism
rkg  Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg04145  Phagosome
rkg04514  Cell adhesion molecules
rkg04672  Intestinal immune network for IgA production
rkg05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:rkg00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    130102042
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    130102042
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    130102042
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    130102042
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rkg04147]
    130102042
Exosome [BR:rkg04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   130102042
  Exosomal proteins of epithelial cells
   130102042
  Exosomal proteins of breast milk
   130102042
SSDB
Motif
Pfam: C1-set MHC_II_alpha Ig_3 Ig_2 C2-set_2 C2-set_3 I-set ig
Other DBs
NCBI-GeneID: 130102042
NCBI-ProteinID: XP_056123908
LinkDB
Position
Unknown
AA seq 237 aa
MEGFLRIIVIGVCVVYINAQSYHEFGLIEACGDLNQEDFIVKFDDEQVGHVDFKEQKEIL
TLPDFAGQIELPPLYADGKKGVSVCKNVAGVLKEVYANSSVPLESPWSSIYPKSEAQLNV
KNALICHVTGFFPPPVKVSWTKNNVNVTDGSTISRYYSNKDGTLNVFSRLSFIPEEGDIY
SCSVEHKALQQPQTRTWDVEITEPSIGPSVFCGVGLALGLLGLVTGVFFIAKGNNCN
NT seq 714 nt   +upstreamnt  +downstreamnt
atggaaggattcttaagaattatagtcatcggtgtctgtgtcgtttacattaacgcccaa
agttatcatgaatttgggctgattgaagcatgtggtgatttaaatcaagaagatttcatt
gtcaaatttgatgatgaacaggtgggacatgtagacttcaaagagcaaaaagaaatcctc
acattacctgactttgctggccaaattgagctaccgccactgtatgcggacggaaaaaaa
ggcgtatctgtttgcaaaaatgttgcaggtgtgcttaaagaggtgtatgccaattcatct
gtaccacttgaatccccctggagctcaatttatcccaaaagtgaggcacagttgaatgtc
aaaaatgccctgatctgtcatgtgactggattcttccctccacctgtcaaagtttcatgg
accaagaacaatgtgaatgtgacagatggatcaaccatcagcagatattactccaacaaa
gatgggacacttaatgtattttctcgactgagcttcattccagaggaaggagacatttac
agctgttctgtggagcacaaagcccttcaacaacctcaaaccagaacatgggatgtagag
ataacggagcccagcatcggcccatcagtgttctgtggagttggtctggctcttgggctg
ctgggtttggtcactggagtctttttcattgccaaaggaaacaactgcaattaa

DBGET integrated database retrieval system