Rhinichthys klamathensis goyatoka (western speckled dace): 130102846
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Entry
130102846 CDS
T09701
Symbol
ptcd3
Name
(RefSeq) pentatricopeptide repeat domain-containing protein 3, mitochondrial isoform X1
KO
K17659
pentatricopeptide repeat domain-containing protein 3
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
rkg03029
]
130102846 (ptcd3)
Mitochondrial biogenesis [BR:
rkg03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
130102846 (ptcd3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rib_mS39_PPR
PPR_2
PPR_3
PPR_long
TPR_24
RPM2
Motif
Other DBs
NCBI-GeneID:
130102846
NCBI-ProteinID:
XP_056124919
LinkDB
All DBs
Position
Unknown
AA seq
679 aa
AA seq
DB search
MVFRQALGVMASSCSRALRHHACKSSRILRIHLHNSWPNRSFALNSAADQQPAVSSLEEI
VIPKKKTWNKEAVLQALASTVNRDPTGSDYRFQDDPYLAPKTAFDFKLFSLSQESGRNAA
KYFINKYPNYFQKDYAYPHIPCLMPETLEAQIEEASEAALAERVHLRKVKAAVDLYDQLL
QAGTPVSLDVTNELLELICFYGDRDPAQENIPEQRTEETEDVQDEPQASKARGAKASDVL
KFPWKENNNAERIFALLSEPNTRSYSALIRGMVKYGAYSKAFSTYTDLLNNRLTADVHIF
NALIAAAPDAQEKYNEKWELMVDLLKQMAEQKVKPNLLTFNAVLKALRRCGSLGKSQAFP
VISEMKALKIEPCLASYGHVLNIFYKTGATVQGQKDILQEVMYEVSGKSFAPQDPDDAQF
FITAMRICLETKDMEQAYRVHRLLGVGENWRLMGNDVKRSIYYARFFSLLCLMEHVDVVM
KWYRDLIPSVYYPNSNVMTDLLRALDTDNRLELIPQIWKDIKALGHANRQKLVEDLLALM
ARETHSAQVQDSLADCALDIRSMYSTGDRGKAQMSWTAGSLSDVISVLLAAHRTPDAWET
LKLFKTHNRVPSVDLLNRFLTCVKESGDVDQAVELVKISAGFCLPDTHTLIHRIQQEFEL
SPEHRSILSDLETQTFSSD
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atggttttccgtcaagcactcggtgtcatggcgtcctcctgttcgcgagctctcaggcat
catgcttgtaagagtagcagaatattgcgcatccatctgcacaattcatggcctaatagg
agttttgctctgaattctgctgcagaccaacaacctgccgtttcttcactagaagaaata
gtcattccaaagaagaaaacgtggaataaagaggctgtcttacaggcactggcatccacc
gtgaacagggatcctacaggatcagattacagattccaggatgatccatatctcgctcca
aaaacagcatttgactttaaattattctccttgtcccaggagtcaggcagaaatgctgcc
aaatatttcatcaacaaatacccaaattacttccagaaagactacgcataccctcatatt
ccctgtctgatgccggagactctggaggctcagatagaggaggcgtctgaagctgcgctc
gcggagagagttcacctgaggaaggtcaaagctgctgtggatctgtacgaccagctgctg
caggccggtacaccagtgtctttggacgtgacgaatgagctgttagagctgatctgcttc
tatggagaccgtgatcctgcacaagagaacatcccagaacagaggactgaagagacggag
gacgtccaggatgagccgcaggctagcaaagcaagaggagcaaaagcctcagacgtactg
aagttcccctggaaagagaataataatgctgagcgaatctttgcgctgctgtccgagccg
aacacgcgctcatacagcgctctgatccggggcatggtgaagtatggcgcttactcgaag
gcgttcagcacgtacacggacctgctgaacaaccggctgacggccgatgtgcacatcttc
aacgccctgatcgcagccgccccagacgcacaagagaagtacaatgagaaatgggagctg
atggtggatctcctgaagcagatggcggagcagaaggtcaagccgaacctcctgacgttt
aacgccgtcctgaaggctttgagacgctgtggctccctgggaaagtctcaggcctttcct
gtgatcagcgagatgaaggctctcaagatcgagccctgtctggcctcttacgggcacgtg
ctcaacatattttataaaacaggtgccacagttcagggccaaaaagacattctacaggaa
gtgatgtacgaggtgtcggggaagagcttcgccccacaggacccggatgatgcacagttc
ttcatcactgccatgagaatctgtctcgagaccaaggacatggagcaggcgtacagagtc
cacaggctgctgggagtcggggagaactggagactcatgggaaatgatgtaaaacggagc
atctactacgcgcgcttcttcagcctgctctgcctgatggagcatgttgacgtggtgatg
aagtggtacagagatctgattccctcagtgtactaccccaattctaacgtcatgacggat
ctactgcgagcgctggataccgacaacagattagaactcatcccgcagatatggaaagat
atcaaagcgctgggccacgcgaacagacagaagctggtggaggatctgctggcactgatg
gccagagaaacacacagtgcgcaggtgcaggactcgctggccgactgtgcgctggacatt
aggagcatgtacagcaccggtgaccgagggaaggcccagatgagctggacggccggttct
ctcagcgacgtcatctccgtcctgctcgcggctcacaggacaccggacgcctgggagaca
ctgaaactcttcaaaacccacaatagagttcccagtgtggatctgctgaaccggttcctg
acgtgtgtgaaggagagcggggatgtggatcaggccgtggagctggtgaagatctccgct
ggcttctgtctgcccgacacacacacactcatccacaggatccagcaggagttcgagctc
tcgccggagcacaggagcatcttgtctgatctggagactcagaccttcagcagcgattaa
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