Rhinichthys klamathensis goyatoka (western speckled dace): 130102905
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Entry
130102905 CDS
T09701
Symbol
c9orf72
Name
(RefSeq) guanine nucleotide exchange factor C9orf72 homolog
KO
K23609
guanine nucleotide exchange protein C9orf72
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
130102905 (c9orf72)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rkg04131
]
130102905 (c9orf72)
Membrane trafficking [BR:
rkg04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
130102905 (c9orf72)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C9orf72-like
DUF7645
Motif
Other DBs
NCBI-GeneID:
130102905
NCBI-ProteinID:
XP_056125013
LinkDB
All DBs
Position
Unknown
AA seq
462 aa
AA seq
DB search
MSAACPPQSPAVAKTEVLVEDWCPMLAATFAYWDNILGPRVRHIWAPKGQGLSLLSDGEV
TFLANHTLNGEILRNAESGAVDVKFFVLAEKGVIIVSLIFDGELKGDKNTCALSIILPQS
ELGFYLPLHSVCVERLKHIIRKGRICMQKGYNIISMLSSEIVPIMELLTSMKKHSVPEEV
DLKDTVLNDDDIGDSCHEDFLHKAISSHLQTCGCSMVVGSNPEKVNKIVLTLCLFLTPAE
RKCSRLCHPDGSFKYDTGLFVQGLLKDSTGSFVLPYRQVLYSPYPTTHIDVDINTVKQMP
PCHEHTYHQRRYMRSELSALWRAASEDDISSDNLINAQDSYTPDLNIFQDVMHKDMLVKS
FIDEVFLLKPGLSLRSVYLSHFLLLLHRKALTLLRYIEDETQKGKKPFRSLRNLKTDLDL
TLEGDLNIIMAMAEKLRAGLHSFVFGKSFVTSMQERDLLMSF
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcagcctgtcccccgcagtctccagctgtggctaagactgaagtgctggttgag
gactggtgtcccatgttggctgcgaccttcgcttactgggacaacatcctgggacctcgt
gtacgccacatctgggccccaaaaggtcaggggttgtcgctgctcagtgatggagaggtc
acatttctggccaatcacacgctgaacggtgagattttgcgaaatgctgagagcggcgca
gtggatgtgaaattcttcgtcttggcggaaaagggagtcatcatcgtctcactgattttt
gatggagaactcaagggtgataagaatacttgcgctctgtcaatcatcttgccacagtca
gagctcggtttctacctgccactgcacagcgtgtgtgtggagagactcaaacacattatc
cgcaagggacgcatctgcatgcagaagggttacaacataatctctatgttgtcatctgag
attgttcccataatggagcttctcacttccatgaagaaacacagtgtaccagaggaggtg
gatctaaaggacactgtgctcaacgatgatgatattggagacagctgtcatgaagacttt
ttgcacaaggctatcagctctcatcttcagacttgtggctgctccatggtggttggcagc
aatcctgagaaagtcaataagattgtgctcacgctgtgtctcttcctcactcctgcggag
agaaagtgctctcgactctgtcaccccgatggctcgtttaaatatgacaccggtctcttt
gttcagggccttcttaaggactccactggcagctttgtattaccctaccggcaggttctg
tactccccgtatcccaccacccacatcgacgtggacattaacacggtgaagcagatgcca
ccctgccacgagcacacgtatcatcagcggcgctacatgcgctctgagctcagtgccctt
tggagggctgccagcgaggatgacatcagttcagacaacctcatcaatgcccaggactcc
tacaccccagacttgaatatatttcaggacgtgatgcacaaagacatgcttgtgaagtcc
ttcatagatgaggtgtttctgttgaaaccaggtctgtctctgcggagtgtgtatttgtcc
cacttccttctcctgctgcacaggaaggccctgacactgctccgatatattgaggatgag
acgcagaaggggaagaaacctttcagatctctgcgcaatctgaagactgatttagactta
acgttggaaggggacttgaatatcatcatggcgatggcggagaagctgcgggcaggcctt
cactccttcgtttttgggaagtctttcgttaccagcatgcaggagcgtgacctcctcatg
agcttctga
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integrated database retrieval system
