Rhinichthys klamathensis goyatoka (western speckled dace): 130103174
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Entry
130103174 CDS
T09701
Symbol
cad
Name
(RefSeq) CAD protein isoform X1
KO
K11540
carbamoyl-phosphate synthase / aspartate carbamoyltransferase / dihydroorotase [EC:
6.3.5.5
2.1.3.2
3.5.2.3
]
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg00220
Arginine biosynthesis
rkg00240
Pyrimidine metabolism
rkg00250
Alanine, aspartate and glutamate metabolism
rkg01100
Metabolic pathways
rkg01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
130103174 (cad)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
130103174 (cad)
00220 Arginine biosynthesis
130103174 (cad)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rkg01002
]
130103174 (cad)
Enzymes [BR:
rkg01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.3 Carboxy- and carbamoyltransferases
2.1.3.2 aspartate carbamoyltransferase
130103174 (cad)
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.2 In cyclic amides
3.5.2.3 dihydroorotase
130103174 (cad)
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
130103174 (cad)
Peptidases and inhibitors [BR:
rkg01002
]
Cysteine peptidases
Family C26: gamma-glutamyl hydrolase family
130103174 (cad)
Metallo peptidases
Family M38: beta-aspartyl dipeptidase family
130103174 (cad)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CPSase_L_D2
GATase
CPSase_sm_chain
OTCace_N
OTCace
CPSase_L_D3
MGS
ATP-grasp
Dala_Dala_lig_C
ATPgrasp_Ter
Amidohydro_1
Peptidase_C26
ATP-grasp_3
DJ-1_PfpI
GARS_A
DHOase
Motif
Other DBs
NCBI-GeneID:
130103174
NCBI-ProteinID:
XP_056125353
LinkDB
All DBs
Position
Unknown
AA seq
2243 aa
AA seq
DB search
MSEKIASLVLEDGTAFKGRLFGAVSSVSGEVVFQTGMVGYPEALTDPSYKSQILTLTYPL
IGNYGVPEDEDGEFGLSKWFESSRIHAAALIVGEVSKNPSHWSSAKSLDKWLREQGIPGL
EGVDTRSLTKKIREKGTMLGKLVVEGTSDNNIPFDNPDTRNLVKEVSMKEPKVFNPEGTV
RITAIDCGIKYNQIRCLCQRGARVTVVPWDHLLDCNDFDGLFISNGPGNPEYCKETVENI
RKVACVENPKPVFGICLGHQLLSLVIGAKTYKMKYGNRGHNQPCIHKGTNRCFITSQNHG
FAVDPQTLPEDWDVLFTNANDQTSEGIVHNHKPLFSVQFHPEHMAGPTDLVSLFDVFLDT
VKDAKDGKAGKSVKQRLTEHLTYPGSPDPEAFVRPRKVLVLGSGGLSIGQAGEFDYSGSQ
AIKALKEENIQTILINPNIATVQTSKGLADKVYFLPITPEYVMQVIKNERPDGVLLTFGG
QTALNCGVELTKQGVLEQYKVRVLGTPVASIEMTEDRKIFVEKMEEINEHVAPSEAAMSV
EQAVAAAERLCYPVLVRSAFALGGLGSGFANNRDEMITLVTQAFAHTSQVLVDKSLKGWK
EIEYEVVRDAYDNCVTVCNMENVDPLGIHTGESIVVAPSQTLNDYEYNMLRNTAIKVVRH
LGIVGECNIQYALNPESEQYYIIEVNARLSRSSALASKATGYPLAYVAAKLGLGIPLPVL
KNSVTNSTTANFEPSLDYCVVKVPRWDLSKFLRVSTTIGSSMKSVGEVMAIGRSFEEAFQ
KALRMVDENCVGFDHTIKPVSEEELQTPTDKRIFVLAAALRAGYTVERLYELTKIDHWFL
HKMKNIADHEKLLEMYNQDESAMPPEVMRKAKQLGFSDKQIAQAVQSTELAVRKMRRDWK
ILPVVKQIDTVAAEWPAHTNYLYLTYNGSESDVVFEQPHVMVIGSGVYRIGSSVEFDWCA
VGCIMELRKMGYKTIMVNYNPETVSTDYDMCDRLYFDEISFEVVMDIYEMENPEGVILSM
GGQLPNNIAMSLHRQQCRILGTSPEFIDSAENRFKFSRMLDTIGISQPRWKELSDIESAV
GFCKTVGYPCLVRPSYVLSGAAMNVAYSDSELEKFLTSAVAVSKEHPVVISKFIQEAKEI
DVDAVACDGVVIAIAVSEHVENAGVHSGDATLVTPPQDINQKTMERIKMIVHAIGLELQV
TGPFNLQLIAKDDQLKVIECNVRVSRSFPYVSKTLGVDLVALATRVILGEEVEAVGLMKG
TGIVGVKVPQFSFSRLAGADVVLGVEMTSTGEVACFGENRYEAYLKAMLSTGFKIPKKNI
LLSIGSYKNKSELLPTVQTLESLGYNLYASVGTADYYTEHGIKVMAVDWPFEEESDCHNK
DKQRNIMDYLEENHFDLVINLSMRNSGGRRLSSFVTKGYRTRRMAIDYSVPLITDIKCTK
LFVQALGQIGRAPHVKTHVDSMTSQKLIRLPGLIDVHVHLREPGATHKEDFSSGTAAALA
GGITMVCAMPNTNPAIIDPSSLTVAQKLAKAGCRCDYALFVGASSDNATLLPSIASSTAG
LKMYLNDTYSTLKMDNVSLWMEHFEKWPKHLPIVAHAEKQTVAAILMVAQLYQRPVHICH
VAKKEEILIIRAAKQKGILVTCEVAPHHLFLCEDNVPAIGNGRAQVRPMLGTREDMEALW
ENLDIIDCFATDHAPHSVEEKNSEKPPPGYPGLETMLPLLLTAVSEGRLTIDDIVKRLYE
NPSRIFSLPAQEDTYVEVDLEQEWTIPKHMQFTKSKWTPFEGMKVKGKVMRVVLRGELAY
IDGQVFVPPGYGQDVKSWSTALPGTTDVIKDAPKRVSEAITPERPRQAAPVDVVRSRAPS
PRRSAGDGRFILPPRIHHASDPGLPPGFKRSTIQRQKALELAPPAEPYAHPPPLARILSP
QAGQQQILPHPQTSPLLHPLVGQHILSVRQFSKEQMSHLFNVAHTLRLMVQKERPLDILK
GKVMASMFYEVSTRTSSSFAAAMQRLGGSVVHFSESTSSTQKGESLADSVHSMSCYADVI
VLRHPIPGAVKSASRHCRRPVINAGDGVGEHPTQALLDIFTIREELGTVNGMTITMVGDL
KHGRTVHSLARLLTQYRINLRYVAPKNLTMPAEIIDFVASKGIKQEEFNSIEEALPETDV
LYMTRIQKERFASEEEYKVCFGQFILTPHIMTGAKRKMVVMHPLPRVNEISAEVDTDPRA
AYFRQAENGMYIRMALLATVLGR
NT seq
6732 nt
NT seq
+upstream
nt +downstream
nt
atgtcggagaaaattgcatctttagtattggaggacgggacagcatttaaaggccgtctg
ttcggtgccgtatcctcagtgtctggtgaagttgttttccaaacaggaatggtgggttac
ccagaggctctcacagatccctcttacaagtctcaaatacttactctgacgtacccgttg
attggcaattatggtgttcctgaagatgaggatggagagtttggactcagcaagtggttt
gaatcttccagaatccatgctgctgctctcattgttggggaggtgtcaaagaatcccagt
cactggagctccgccaagtctctggataagtggctgcgagagcaaggcatccctggactc
gaaggggttgacactcgaagcttgaccaaaaagatcagagaaaagggaaccatgttgggg
aaacttgtggtggaaggaacttcagacaacaacattccctttgacaatccggacacccgc
aaccttgttaaggaagtttccatgaaagaaccaaaagtttttaatccagagggaacagtg
agaatcactgccatagactgtggcataaaatacaaccagatccgttgcttgtgccagaga
ggtgcccgggtcaccgttgtcccctgggatcatcttctggactgcaatgactttgatggg
ttgttcatcagcaatggccctggcaatccagagtactgtaaggagaccgtagagaacata
cggaaggtggcatgtgtggagaatcccaaacctgtctttgggatttgtctgggccatcag
ctgctatctttggtcattggtgcaaaaacatacaaaatgaagtatggtaatcgtggccat
aaccagccctgcatccataaaggaacaaatcgctgtttcatcacgtctcagaatcatggg
tttgctgtggatccccaaactctcccagaagactgggatgtactcttcaccaatgccaat
gaccaaaccagtgagggcattgttcataaccacaaaccacttttcagtgtccagttccat
cctgaacacatggcaggtcccacagaccttgttagtctctttgatgtgtttctggataca
gtcaaagatgcaaaagatggcaaagctggaaaatcagttaagcaaaggctaacagagcac
ctcacttaccctggatctcctgacccggaagcgtttgttcggcctcgtaaagttttggtt
ctaggttcaggggggctttccattggacaggctggagagtttgactattctgggtctcag
gctataaaagctctaaaagaggagaacatccaaaccattcttatcaacccaaacattgcc
acagtacaaacctcaaagggcctggcagacaaagtctacttcctcccgatcacaccagag
tatgtcatgcaggtgatcaagaacgagcgtccagatggagtgttgctcacattcggaggt
cagacggccttgaactgtggtgtggagctcactaagcaaggagtgctggaacaatacaaa
gtgcgtgtgcttggaaccccagtagcctccatagagatgactgaagacaggaagatcttt
gtggagaagatggaggaaatcaatgagcatgttgcccccagtgaagcggccatgtctgtt
gaacaggcagtggctgctgctgaaagactctgctatcctgttctggtccgttctgcgttt
gccctgggtggactgggttcaggctttgccaataatagagatgaaatgatcacgttggtt
acccaggcctttgctcacacatcacaagtcctggttgacaaatcgcttaaaggctggaag
gaaattgagtatgaagtggtgcgggacgcctatgacaattgtgttacggtttgtaacatg
gagaatgtcgatcctctaggaattcacactggggagtcaatagtggtggctcctagtcag
acactgaacgactatgaatacaatatgctgagaaacacggccatcaaagttgttcggcac
ttgggcattgtgggagagtgcaacattcagtatgccttaaatcctgaatccgagcagtac
tacatcattgaagtcaacgctcgtctctcacgaagctctgcattggccagtaaggccacc
ggttaccctctggcctatgtggccgctaaactcggcttgggaatccctctgcctgtgctc
aagaattcagtgacgaattccactacagccaactttgagcctagtctggattactgtgta
gtgaaggttcctcgttgggatttgagcaagttccttagagtcagcactacaattggcagt
tccatgaagagcgttggagaagtgatggccatcggccgcagctttgaagaggccttccag
aaagctttgagaatggtggatgagaactgcgttgggttcgatcacacaatcaaaccagtg
tctgaagaggagttgcagacacccacagacaagcgcatctttgttctggcagctgcgctg
cgtgccggctacacagttgaacgtctttatgagctgaccaagatagaccactggtttctg
cataaaatgaagaacattgcagaccacgagaagcttctggagatgtataatcaggatgag
agtgcaatgccacctgaggtcatgaggaaagccaagcagctgggcttctcggacaaacag
attgcccaagctgtgcaaagcactgagctggctgtgaggaagatgaggcgagactggaag
attcttccggtggtcaagcagattgacacagtggctgccgagtggcccgcccacaccaac
tatctgtacctgacctataatggctcagaaagcgatgtggtcttcgagcagccccatgtc
atggtgatcggctctggggtttaccgcatcggaagcagcgtggagtttgattggtgcgct
gttgggtgtattatggagctgaggaagatgggatacaaaacgattatggtgaactacaac
ccagaaacagtcagcacagattatgatatgtgcgacagactgtattttgatgagatctcc
tttgaggtggtgatggacatatatgagatggagaacccagagggagttattctgtccatg
ggtggacagctgcccaacaacatcgccatgtccctgcatagacagcagtgcaggatcctg
ggcacctcaccggagttcattgactctgcagagaaccgcttcaaattctccaggatgctg
gacacaataggaatcagccagccccgatggaaagagctctctgatattgagtctgcagta
ggtttctgcaagacagtgggttacccctgtctggtgaggccgtcgtatgttctcagcggg
gctgctatgaacgttgcctactcggatagtgaactggaaaagttcctgaccagtgctgtt
gccgtgtcaaaggaacaccctgtcgttatctccaaattcatccaggaagccaaggaaata
gatgtggatgccgtggcctgtgatggagtggtcattgccatagctgtgtctgagcatgtg
gagaacgcaggggtgcattctggagatgccacactggtgactccccctcaggatatcaac
cagaaaaccatggagcgcattaagatgatcgttcatgctatcggcctggagcttcaggtc
accgggcccttcaacctgcagctcattgccaaggatgatcagctgaaggtgatagaatgc
aatgtgcgagtttcacgctccttcccttatgtatccaaaacacttggtgtcgatcttgtt
gccctagcaacaagagtcattttgggagaggaagttgaggctgttgggctcatgaagggg
actggcattgtgggagttaaggttcctcagttctccttctcacggctggctggagcagat
gtggttttaggtgttgaaatgaccagcactggagaagtggcctgctttggagagaaccga
tatgaggcctatctaaaagccatgctcagcaccggcttcaaaatccctaaaaagaatatt
ctcctctctattggtagttacaagaataaaagcgagcttctgcccacagtccagactttg
gagagtttgggttataacttgtatgccagtgtaggcaccgctgactattacactgaacat
ggaattaaggtgatggcagtggactggccatttgaagaggagagtgactgccataataag
gacaaacagaggaacatcatggactatttagaggagaaccattttgacttggtcattaat
ctgtctatgaggaactctggtggaagacgcttgtcctcctttgtgaccaaaggttaccgc
actcgtcgaatggccattgactactccgtaccactcatcactgacatcaaatgcaccaag
ctgtttgttcaggcgctggggcaaattggtcgggctcctcatgtaaagactcatgtagac
agcatgacttcacagaaactcatccgtttacctggtttgattgatgtccatgtgcatcta
cgggaacctggtgccacccataaagaggacttctcttcgggcacagctgccgccctggct
ggaggaatcaccatggtgtgcgccatgcccaacactaaccctgcaatcattgaccccagc
tccttgactgttgcacagaagcttgccaaggctggttgccgctgtgattatgctcttttc
gtgggggcgtcatctgacaacgctactctacttccgtccattgcaagctctacagctggt
ctgaagatgtacttgaatgacacatactccactttaaaaatggacaatgtttctctgtgg
atggagcactttgaaaagtggccaaagcacttgcccattgtggcacatgctgagaagcag
acagtggcagcaatcttgatggtagcgcagctgtatcagagacctgttcatatttgccat
gttgccaagaaagaagagattctgatcattcgagctgctaaacaaaagggtatcctggtg
acgtgtgaagtggcacctcaccatctcttcctgtgtgaagataatgtgcctgccattggg
aacggcagagcacaggtgcggcccatgttgggcacacgtgaggacatggaggcgttgtgg
gaaaatctagacatcattgactgtttcgcaacagaccacgcccctcattcagtagaggag
aagaactctgagaaaccacctccaggttacccgggtctggagaccatgcttcctctactg
ctcacagctgtcagtgagggtcgccttaccattgatgacatcgtcaagaggctctacgaa
aaccccagcagaatattctctcttcctgctcaagaagacacttatgtagaggtggacttg
gagcaagagtggactattccgaagcacatgcaattcaccaagtcaaagtggacgccattc
gagggcatgaaagtgaagggaaaggtcatgagggtggtgctcagaggagagttggcctat
attgatggacaggtgtttgtacctcctggttatggtcaggatgtgaagtcatggtcaaca
gccctgcctggaacaactgatgtgataaaggatgctcccaagcgtgtgagtgaggcaata
actcctgagcgcccccgtcaggcagcacctgttgatgtggtccgtagccgtgccccgagc
ccacgccgttcagctggggatggacgcttcattctccctcctcggatccaccacgcatct
gatcctggtctgccaccaggtttcaaaagatctaccatacagcgccaaaaggcattggaa
ttggctcctccagcagagccatacgcacaccctcctcccctggccaggatcctgtcacct
caagctgggcagcagcagatcctgccccacccccagacctccccgctgctgcacccgttg
gtgggccagcacatcctgtccgtgcgccagttcagcaaggaacagatgtcccacttgttc
aatgtggcacatactcttcgtctcatggtgcagaaagagcgacccttggatattttgaag
ggtaaagtcatggcctccatgttctacgaggtgagcactcgcaccagtagttcgttcgca
gcagccatgcagcgtctgggaggttcagtggtgcatttcagcgagtccacatcctccaca
cagaagggcgagtctctggccgactctgttcactcgatgagctgctatgctgatgttatt
gttctgcgccaccccatacctggagctgtaaaaagtgcatcaaggcattgtcggcggccg
gtgatcaacgctggtgatggagtcggagaacatcccactcaggcccttctggatatcttt
acgatccgagaggagctgggaacagtcaatggcatgactattaccatggttggtgatctg
aaacatggccgcactgtgcattctctggctagacttctcactcaatacaggatcaatttg
cgctacgtggcccccaaaaacctcaccatgcctgctgagatcattgactttgtggcctct
aaaggcattaaacaggaggagtttaacagcattgaagaggctctcccagagactgacgtc
ctgtacatgacgagaatacagaaggagcgattcgcctctgaagaagagtacaaagtgtgt
ttcgggcagttcatcctaaccccacatatcatgacgggagccaaaaggaagatggtggtc
atgcatcctcttccccgagtcaatgagatcagtgcggaggtggacacggatcctcgagct
gcttattttcggcaggcggagaatgggatgtatattcggatggcacttctggctactgtg
ctgggtcggtga
DBGET
integrated database retrieval system
