KEGG   Rhinichthys klamathensis goyatoka (western speckled dace): 130103385
Entry
130103385         CDS       T09701                                 
Symbol
kdm6ba
Name
(RefSeq) lysine-specific demethylase 6B isoform X1
  KO
K11448  lysine-specific demethylase 6B [EC:1.14.11.68]
Organism
rkg  Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:rkg00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:rkg03036]
    130103385 (kdm6ba)
Enzymes [BR:rkg01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.68  [histone H3]-trimethyl-L-lysine27 demethylase
     130103385 (kdm6ba)
Chromosome and associated proteins [BR:rkg03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    130103385 (kdm6ba)
SSDB
Motif
Pfam: JmjC KDM6_C-hel KDM6_GATAL
Other DBs
NCBI-GeneID: 130103385
NCBI-ProteinID: XP_056125608
LinkDB
Position
Unknown
AA seq 2005 aa
MHHTPEQFTGCSTRDPFPLDGLNRGPWTPVGSRAWPPPSRCLPGVSQHQFLSHMPPSHMT
GLNQPSKFLNNGPLHRGDKQDLSQALLPGLQRMPPAPPRPWEPTRTGQGYEPLPGENHNR
LHNGYNAGPPSHLTARANQLLKYGAPQPQFTAHGSRPMPPLPDIWTQAQTQQQPRGPHSH
SGQLKRPGQPLGEHSVIQHTPAPSLHRPMEDCPGPSKRKKSSGSEQAPHSAMERIPGQPV
HLNQQPSSHYPSPKPGFWSPLHKGGALWNPNERKSGQIDFQDSAKPGIGSFPYKPPSLNP
STMSSPIIPPTRGYGQSRGPLLPQSHKTGPSSQSLGPPSQSPHTHHSTYPYPNNRPSALT
QGQPQGTTTQRGRDSVLNSLDRHPPPPPTSSSSLRADRERPAPSPANHTTVPYSHSQFQP
HPGLIHSTSPSASNQAQATVPQHNPNKPWKNQESRDISATGDSQVVARLSQAQNKVVGGD
QGPGTPKRVSPSQAPVRKPVITPNLETPRPPCSLGLYTNVGDIPTMSSAPPTTTSIPSTL
SSWRGTDSSVLISNPNHVSMIGKNLPHPGYQGVHPGVGTLPHPYRGAQSQIQQSTLPHTG
QGRPNYTPVSSTFSTLNSGLQRSGESVITSKTSNTLQRAVISPLHHPQPPAHIKVSSALQ
PISNSSCNLVPIQASPSISQATTTVPAPVYLRSCLQTAASSSQSTADALNKLDAELQGHM
QAEERMREQEEKRKRNVERQEVETKPHGESAIKSLERLLSGSAAEPLPPRLSPANAPSSI
SPPSQNSPPYPWLSRGGVPQRPSGTATTINERPRPPPLTPQTEYAREKQRQREKWKSGAP
SQNPPGIPTYPSESGLISPSHNHAMQLKPDPSKDITMLKTSHIPGILDAIPNPPPLREPP
KLYQAFPKDVRSSCTQIRTTANSLQKHMPSTGLGSLGSSASSCSGDSDGAQFEEETSELL
PDGLANIMKMLDESIKKEEELYSGQRGEQAVPEPQFSANVAQMKSYLCAPDLVPALKQSP
TEDYQPVSHASPPVLSRQGSLASPCSRTSSLEEEEEVLKVIPKSANSISMESRGSILATT
GTNYRHSDLAKLYGLSELEKSECEDDEDDAEREDETPSCSPPQRPHLHQTGVNSMFKNLA
SVLESQKYTYRGGPFGRPPPSAFVGVKYSSSLSLGPDICRQQQSTSPTSGTTNHPGFSSP
TQTPAISNSGESCPLSPTAWASERKRGDKISQSDLLGNDDEEEISEEPTGEKDSGTVKDL
LERRPKLTTISESSLAELGHSYELNKHILPYKGHSKAESQEICKPVKEKDRHRERERERK
HKHSSSKKHEDRKERKKKHRERYDDASLSSSSSSSFSRRHRDGKSHKEKKSRQVLGNLDI
QSKEFREKEQERDGDKKRRKEECNQSQSEGEEWAQSRDKDSSSGRSSDLPSASSAFCSDD
FQKLKALTDGPPKELKIRLIKVESGDRETFIASEVEEKRIPLEQITIKNTASEIIRACKG
ARMKEKFKESYLLPAFSVKPILPLEMPIPREKLNPPTPSIYLESKRDAFSPVLLQFCTDS
KNPVTVIRGLAGSLRLNLGLFSTKSLVEANSEHAVEVRTQVQQPADENWDSTGTGQTWPC
ESSRSHTTIAKYAQYQASSFQESLQEEKGSDFEEEEDDKSASNSENLTSNSSAPGSSSEQ
KSVGKIIKFGTNIDLSDAKRWKPQLQELQKLPAFMRVSSSGNMLSHVGHTILGMNTVQLY
MKVPGCRTPGHQENNNFCSVNINIGPGDCEWFSVHDDYWEAISDFCEKHGVDYLTGSWWP
VLDDLYRSNIPVYRFIQRPGDLVWINAGTVHWVQAVGWCNNIAWNVGPVNSYQYQLALER
FEWNEVKKVKSIVPMIHVSWNVARNVKVSDPDTYKMIKHCLLQSIKHIQILRDQLVASGK
KISYQSRVKDEPAYYCNECDQVEVFNLLFVTSENGSRKTYVVHCEDCARQRSPNLSNVVV
LEQYRMEELMNVYDSFTLAISPSSR
NT seq 6018 nt   +upstreamnt  +downstreamnt
atgcatcacacaccagaacagttcaccgggtgcagcacacgggacccttttcctctggac
ggactcaaccggggaccatggactcccgtgggcagccgcgcctggccacctccctccagg
tgcttacctggtgtcagtcagcaccagttcctctcacatatgccaccaagtcacatgact
ggcctaaaccagcctagtaaatttttaaacaatggtcctttacatcgaggggataagcaa
gacctgtctcaggctttgttgccaggattacaaaggatgccccctgctcctccaagacct
tgggaaccaaccagaactggccagggttatgagccattgcctggtgaaaaccacaaccga
ctacacaatggctacaatgcagggcctccttcacacctcacagctcgagccaatcagcta
ctgaagtatggtgctcctcaacctcagttcacagcccatggctcacggcccatgcctcca
ttacctgatatatggactcaagcccagactcagcagcaacccagaggacctcactctcat
tctggacagttaaaacggcctgggcaacctctgggagagcactctgtcattcagcatacc
cctgctccatctttacaccgacccatggaggactgccccggtccaagcaagagaaagaag
agctctgggtctgagcaggctcctcattcagccatggagcgtatacctgggcaacctgta
catttgaatcagcagccatcctctcactacccctctcccaaacctggattttggagccca
ctgcacaaaggaggagcactctggaatccaaatgaacgcaaaagcgggcagatcgatttc
caggattcagccaaaccaggaattggaagtttcccatataaaccgccttccttgaatcca
tcaaccatgtcttcacccatcattccccccacaagaggttacggacaaagcaggggtcct
ctactaccacagtcccacaagaccggtccatcatcacaatctctggggccaccttcacag
agtcctcacacccaccattcaacatacccctaccccaacaacagaccttcagctctaacc
caagggcaaccacagggtactactacacaaagaggacgtgattctgtattgaattctttg
gatagacatcctcctccaccacctacatcctcatcatcactgcgggcagatagggagcgc
cctgcaccctcaccagcaaaccacaccactgtgccttacagtcactcccagttccagcct
cacccagggctgatccattccaccagcccatcagccagcaaccaggcccaggccacagta
cctcagcacaaccccaacaaaccctggaagaaccaggagtcacgtgacatttcagcaaca
ggggattctcaggttgtcgcacgcctttctcaggcacagaataaggttgttgggggcgac
cagggtccagggacgcccaaacgtgtgagtccttctcaggcccctgttcgaaaacctgtc
attaccccaaacctggaaactcctcgtccaccttgctccctgggactatacaccaatgtt
ggagacatccctacaatgagctctgcaccccctaccaccacctccatccccagcacccta
agcagttggagaggaactgattcttcagtgctaatctcaaacccaaaccatgtatccatg
attggtaaaaatctgccacatccagggtatcagggtgtccaccctggtgttggaaccctt
ccacacccatatagaggggcacaatctcagattcagcagtccactcttcctcacacagga
caaggtagacctaactacaccccagtgtcctctactttctccaccctaaactcagggctt
cagagatcaggggagagcgtcatcaccagcaagacctctaacactctccaacgagccgtc
atttcacctttgcatcaccctcaacctccagcacacataaaagtcagttcagccctccag
ccaatatccaacagttcatgtaacttagtgcccattcaagcttccccctcaatttctcag
gcaactactactgttccagccccagtctacctaaggtcctgtttgcaaactgctgcctca
agctctcaatccactgctgatgctttaaataaacttgatgcagagttgcagggccacatg
caagcagaagagagaatgagagagcaggaggaaaagaggaaacggaatgtagagcgacaa
gaagtggagacaaagccacacggtgagtccgcaatcaagagtctggagcgtttgctgtca
ggtagtgcagctgagcctctacctcctcgtttgtctccagccaatgcaccctcttccatc
tcacctcctagccagaattcaccaccttatccctggttgagtcgaggaggagtgccccaa
cgtccttctggaactgcaacaaccattaatgaacgaccacgaccaccccctctcacccca
cagactgaatatgcccgtgagaagcaaaggcagagagagaaatggaagagtggggcacca
tctcagaatcccccagggattcccacatacccctcagagtcaggtctcatcagcccctcc
cacaaccacgcaatgcaattaaaacctgacccctccaaagatatcaccatgttaaaaacc
tctcatatccctgggattttggatgctattcccaaccccccgcccctgcgagagccaccc
aaactttaccaggctttccccaaggatgttcgctcttcatgcacacaaatccgcacgacc
gcaaatagcctgcaaaaacatatgcccagtacaggacttggtagtctgggtagcagtgct
agtagttgcagtggtgactctgatggtgcccaatttgaggaggaaacttctgagctcttg
cctgatggattggctaacattatgaagatgttggatgagtccatcaagaaagaggaggag
ttgtattctggtcagagaggagaacaggcagtaccggaacctcagttttctgctaatgtg
gcacagatgaagagttatttatgcgcaccggacctcgtgcctgccctaaagcaatctcca
actgaggattatcaaccagtgagtcatgcaagcccacctgtgttaagtcggcaaggttcc
ttggcatcgccttgcagtcgcacttcttcacttgaggaagaagaggaggttctaaaggtc
attcccaagtctgccaattccattagcatggagtcgcgaggaagcattcttgccacaaca
ggaaccaactatcgtcatagtgacttggccaagctgtatggcctttcggagttagagaaa
agtgagtgcgaggatgatgaagatgatgctgaacgggaagatgaaacgccatcctgttca
ccacctcagcggccacatctccaccagacaggtgtgaacagcatgtttaaaaaccttgca
tctgtgcttgagagccagaaatacacctaccggggtggaccctttggtcgtcctcctccc
tctgcttttgtgggagttaagtactcctcgtctctttctctggggcctgacatttgcagg
caacaacaaagcacttctcccacatcaggtacaaccaatcacccaggttttagcagtccg
acgcaaacccctgccattagtaactcaggtgagtcctgtcccctctcgcctacagcttgg
gcgtccgagagaaagagaggggataaaataagccagtcagatcttttgggcaatgatgat
gaggaagagatttcagaagaacccacaggagagaaggattctggaactgtgaaagacttg
ttggaaagacgaccaaaactgaccaccatctcagagtcttcgctagcagagcttggtcat
agctatgagttgaacaaacacattctcccttataaaggccactcaaaggcagagtcacag
gagatatgcaaacctgttaaagaaaaggacagacacagagaaagagaacgagagaggaaa
cacaaacacagtagcagtaaaaaacatgaggacaggaaagagagaaagaaaaagcacaga
gaaagatacgacgatgcgtctctttcctcatcctcatcttcaagcttcagtcgacggcac
agggacggaaagtcacacaaggaaaagaagagcaggcaggtgctgggtaacctggacatt
caaagtaaggagtttagggagaaggaacaagagcgtgatggagacaagaagagaaggaaa
gaggaatgtaaccaatctcagagcgaaggggaagagtgggcacaaagtagagacaaagac
agcagctcaggacgttcctctgatctcccatcagcttcatcagcattttgttcggatgac
tttcagaaactaaaggcactgacagatggaccacccaaagaactgaagatacgcctcata
aaagtggagagtggggacagggagacatttattgcttcagaggtggaggagaagaggatt
cctctagagcaaatcaccataaagaacaccgctagtgaaatcatcagagcttgcaaggga
gctcgtatgaaggagaaatttaaggaatcatacctcctacctgccttctctgttaaacca
attttgcccctagagatgcccatccctcgagagaaactcaacccccccacacctagtatc
tatttggaaagtaaaagagatgcattctctccagtcctgctgcagttctgcacagattct
aaaaacccagttactgtcatccggggactagctggctcccttagattaaatcttggtctg
ttttcaactaagtctttggtggaggcaaactcggagcatgcagtagaagttcggacccag
gttcaacagccagcggatgagaactgggattccactggcactggccagacctggccctgc
gagagcagcaggtcacacacaacgattgccaagtatgcccagtaccaggcctccagcttc
caagagagcttacaggaagaaaagggcagtgattttgaggaggaggaagatgacaaatcg
gcctctaactctgagaatttgaccagtaactcctcagctcccggctccagttcagagcag
aaatctgtggggaagataataaaatttggcaccaatattgacctgtccgatgccaaaaga
tggaagcctcagctgcaagaactgcagaagttgccggcgtttatgcgcgtttcttccagt
gggaatatgctgagccatgttggccacaccattttgggaatgaatacagtacaactctac
atgaaggtccctggctgccgcacaccaggacaccaggagaacaataacttttgttccgta
aatatcaatattgggcctggagactgtgagtggttttctgtccatgacgactactgggag
gccatcagtgatttctgtgaaaagcatggagtggactacctgacaggatcatggtggccg
gttctggatgacttgtaccgctctaatatccctgtgtaccggttcatccaaaggccagga
gatctggtatggatcaacgcaggcactgtacactgggttcaagccgtaggctggtgcaac
aacattgcttggaatgtggggcctgtcaactcatatcagtaccagttggctttagagaga
tttgagtggaacgaagtgaagaaagtgaaatccatcgttcccatgattcacgtgtcctgg
aacgtggcacgcaacgtcaaagtcagcgatccagacacttacaagatgatcaaacactgt
ctccttcagtctattaagcacattcagatcctgagggaccagctggtggcatcaggaaag
aagatctcctaccagagcagagtgaaggatgagccggcctactactgtaacgagtgtgat
caggtggaggtgtttaatctgctgtttgtgaccagcgagaacggcagtcggaagacgtat
gtggtgcactgtgaggactgtgcacgacaacgaagcccaaacctctccaatgtagtggtg
ctggagcaataccgcatggaggagctgatgaacgtgtacgactcattcaccctggccatc
agtcccagctcccgatga

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