Rhinichthys klamathensis goyatoka (western speckled dace): 130103629
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Entry
130103629 CDS
T09701
Symbol
cd4-1
Name
(RefSeq) CD4-1 molecule
KO
K06454
T-cell surface glycoprotein CD4
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg03250
Viral life cycle - HIV-1
rkg03260
Virion - Human immunodeficiency virus
rkg04060
Cytokine-cytokine receptor interaction
rkg04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
130103629 (cd4-1)
03260 Virion - Human immunodeficiency virus
130103629 (cd4-1)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
130103629 (cd4-1)
04514 Cell adhesion molecules
130103629 (cd4-1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
rkg04090
]
130103629 (cd4-1)
CD molecules [BR:
rkg04090
]
Proteins
130103629 (cd4-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
ig
Ig_2
V-set
I-set
C2-set
V-set_CD47
Motif
Other DBs
NCBI-GeneID:
130103629
NCBI-ProteinID:
XP_056125893
LinkDB
All DBs
Position
Unknown
AA seq
492 aa
AA seq
DB search
MIKYFAHKITIHPLWLCSEDRMMFSWILISLLVRFLKAQESPIVVYAQIGGTAILPRDVS
VIPNKESSFYVNWYCGLDQTNQPTISKNPQSGIQKGKDVKTHASLLSDFSLQISPVQDFD
FEVWRCEQHVLTSKFTKTYKLYHVTIPKVPAVMFGDPLSLECKLDDSSVKPSVTWIPPEN
SDCHQNKLYKKTISIKDVSRCHSGVWTCKVKYDGREAEATTTVSVIDLSPSPPDPIYTSA
SPSSTVNIPCSLSSNIPWSVLNETGLRGGSWNFTPLSDQKQQSLLSLSIGPVVRWDITPD
TDSKVQGRELKDQDLSFNNLPVSEKIRGEYNCYLKFYSKTLRSKVKVEVLQVSSSGGPRV
YVGQRVNLTCTLGHPHAPDLEVKWKCRSCSSLHSSPFLSIPEVTMEHSGQWTCELWKNEK
RLTYAVLSLKIEKAPVDIWLCVAISSGVVVFILLLVIAIIGIRRHKQIMMYRRRKTRFCC
CKTPQPQGFYKT
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgataaagtatttcgctcataagatcaccattcatcctctctggctctgctctgaggac
agaatgatgtttagttggatactaatatcgctgcttgttcgatttctcaaagcgcaagaa
agccccatagtagtttacgcacagataggagggactgctatcctacctagagatgtatcg
gtaataccaaataaagaatcaagtttttatgtgaactggtactgcgggttagaccaaact
aaccaaccaactatctccaagaaccctcagagtgggatccaaaaagggaaagatgttaag
acacatgcctctctgttatcggatttctctctccaaatctcaccagtacaagattttgat
tttgaagtttggcgctgtgaacagcatgtattaacgtctaaattcaccaagacctacaaa
ctgtaccatgtcactatacccaaggtaccggccgtgatgtttggtgaccctctgtctctg
gaatgtaaactggacgatagttcagttaagcccagtgtaacatggattccacctgaaaac
tcagattgtcatcaaaacaagctttacaaaaagacaatttccatcaaagatgtgtccagg
tgtcatagtggtgtttggacatgcaaggtgaagtatgatgggagagaagctgaagcaaca
acaactgtttctgtaatagacctctccccttctccaccagatcccatttatacctcggcc
tccccgtcctctacagtcaacattccttgctccctgtcttctaacattccctggtccgtg
ttaaatgagactggccttcggggtggtagctggaacttcactcctctcagtgaccaaaag
cagcagtctctcctcagcctcagcattggtcccgtggtcagatgggatatcacaccggac
acagacagcaaggtccagggaagagagttaaaagaccaggatctatcgtttaataatctg
cctgtatcagagaagatcaggggggagtacaactgttacctaaagttctacagcaagacc
ctcaggagtaaagtcaaggtggaggttctgcaggtttcctcatctggaggtcctcgagtt
tatgtaggccagagggtgaatctgacgtgcacattaggacatccacatgcccctgacctt
gaggtgaaatggaaatgtcgctcctgctcctctcttcactcttcaccttttctgtccatc
cctgaagtgacaatggaacacagtggccagtggacatgtgaactctggaaaaatgagaag
aggttgacatatgctgtgctatcattaaagattgagaaagctccagtggacatctggctt
tgtgttgccatcagcagtggagttgtggtcttcatcttgctccttgttatcgccattata
ggcattcgcagacacaaacagattatgatgtacagacgacgaaagaccagattctgctgc
tgcaaaactcctcagccacagggattctacaagacctga
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