Rhinichthys klamathensis goyatoka (western speckled dace): 130104078
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Entry
130104078 CDS
T09701
Symbol
pkp1b
Name
(RefSeq) plakophilin-1
KO
K10387
plakophilin 1
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
rkg04812
]
130104078 (pkp1b)
Cytoskeleton proteins [BR:
rkg04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
130104078 (pkp1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Arm
ARM_ARMC5
HEAT_EZ
Atx10homo_assoc
Arm_2
HEAT
Motif
Other DBs
NCBI-GeneID:
130104078
NCBI-ProteinID:
XP_056126456
LinkDB
All DBs
Position
Unknown
AA seq
732 aa
AA seq
DB search
MMPEPLKSALSIGAVEDTSLALPSDRELRSAQQRVLDQVHTIKRSKSKYSSKSVSGLASP
TSPETDSVFYDFKFSPGPSFSRGGTMTNGNMQRQNFVRKSTNSRSSSGQRMTSNASRVDR
PLFSPTGNLPVQPRANNQLYSYKATRSAPDLGFQPAVNGGGVGATQRSQTAKQTFRMEKA
FSQPNQAFGNGTFGRMTNSNQIGSFQAVSRRPSSLQSNAESRTSMIRNGQVKDISGMNAE
KLLADLTMRDAVEYLFSPDENFQQYGAAHIQHSTFTDDKAKQEVLTLKGIPPLVNLLSSP
SPQIQETVAAALRNVVFKNQANKDEVQRCGGITQAVQMLSDTNSETQRHLTGLLWNLSSA
DNLKPDLLRTALPALTEKVIAPFSASTDDNANTSLAPEVFNNATGCLRNLSSSKPVNRKA
MRNCKGLIDSLMRYTENCVNGGMPDNTSLENCVCILHNLTYQLETEMPSLFTKINMLASQ
ARNRSSPSDAGPIGCFSSQSQKLQQESVFDYPVMEDNNPKGTGWLFHSKALQMYLNLLSS
SERDATLEASCGALQNLTANEGLVSNVLSHTIVQKLNGLKYISPLLESSNPALQNSAIAL
LGNLSRSTRTNKTMARQTLPQLVGFLNSGLTKGDSSPEHDSTMATALHSTHSLLKADPEV
GKSLLNNSLINSLNSMSLNLGLPKSSTAAGVLLHSLWSEKSIQSILKKQGMNKKSFVNDI
TSAAIKSFQVVD
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgatgcccgaacctttaaaatcggctctttcgataggagctgtggaggacacgtctctc
gcgctcccgtccgaccgcgagctgagatccgcgcaacagagagtcctggaccaggtgcac
actatcaagaggagcaagtccaaatacagcagcaagagtgtgtccggcctcgcctcaccc
accagccctgaaactgacagtgtgttttacgacttcaagttttctcccggaccctcgttc
agcagaggaggaaccatgacgaatgggaatatgcaaaggcaaaactttgtgcgcaagtcc
accaactcccgcagctccagcggtcaacggatgaccagtaacgccagcagggtagatcgg
cccttgttctcccccactggcaacctcccggtccagccacgggccaataaccagctgtac
agctataaagccactcgcagcgccccggacctgggcttccaacccgcagtgaacggtgga
ggagtaggagctactcaacgcagccagaccgccaaacagaccttccggatggagaaggcc
ttcagtcagcctaaccaggctttcgggaacggcactttcggcagaatgaccaacagcaat
cagatcggctccttccaggccgtcagcagacgcccgtcttccctgcagtccaacgcagag
tccaggacctctatgatcaggaatggacaagtcaaggatatttctgggatgaatgcagag
aagcttctggccgatttgacgatgcgagacgcggttgagtatctgttcagcccggatgag
aacttccagcagtatggagccgctcacatccagcacagcaccttcaccgacgacaaggcc
aagcaagaggtgctgaccctgaagggcattcctccgctggtaaacctgttgagcagcccc
agtcctcagatccaggagacggtggccgctgccctgagaaacgtggtcttcaaaaaccag
gccaataaagatgaagtgcagcgctgtggaggaatcacacaggctgtgcagatgctcagc
gataccaactctgagacacagagacacctgacaggtctcctgtggaacctctcctccgct
gataacctgaagcccgatctgctccgcacggctctgcccgcgctcacggagaaggtcatc
gcgccgttttcagccagcacagacgacaatgccaacacaagcctggcaccagaggtcttc
aacaatgccacgggatgcctacgcaacctaagctcctccaaaccggtaaaccgaaaagcc
atgcgcaactgcaaaggtcttatcgactcgctcatgcgctacacggagaactgcgttaat
ggtgggatgccagataacacgtctttggagaactgcgtgtgtattctgcacaacctcacc
taccagctggagaccgagatgccgtctctcttcactaaaataaacatgctggccagccaa
gctcgcaatcgctccagtccttcagacgctggtccgatcggctgcttcagctcccagagc
cagaagctgcagcaggagagcgtttttgactatcccgtgatggaggacaacaatcctaaa
ggcaccggctggctcttccactctaaagccctgcagatgtacctcaatctgctgagctcc
agtgaaagagacgccacactcgaggccagctgtggagcgctgcagaacctcaccgccaat
gaaggcttagtatcaaatgtgttgagtcacacgatcgttcagaagctcaacgggctcaag
tacatcagcccattgttggagtcgtccaaccccgcgctacagaacagcgcaatcgctctc
ctcgggaatctgtccagatctacacgcacaaacaaaaccatggcccgtcagactctaccg
cagctggttggtttcctgaactcagggctcacgaagggcgattcctctcccgaacacgac
agcaccatggcaaccgctcttcacagcacacactcccttctgaaggccgatcctgaggtc
ggcaagagtctgctgaacaacagcttgatcaactccctcaacagcatgagtctcaatctg
ggtctgccaaagtccagcactgcggcgggagttcttcttcacagtctgtggtcggaaaag
agcattcagagtattcttaaaaagcaaggcatgaataagaagtcctttgtgaatgacata
acgtcggcagctatcaagtcttttcaggtggtcgactga
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