Rhinichthys klamathensis goyatoka (western speckled dace): 130105388
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Entry
130105388 CDS
T09701
Symbol
trpm2
Name
(RefSeq) transient receptor potential cation channel subfamily M member 2
KO
K04977
transient receptor potential cation channel subfamily M member 2 [EC:
3.6.1.13
]
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
130105388 (trpm2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rkg04040
]
130105388 (trpm2)
Enzymes [BR:
rkg01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.13 ADP-ribose diphosphatase
130105388 (trpm2)
Ion channels [BR:
rkg04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
130105388 (trpm2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSDAT_euk
LSDAT_prok
Ion_trans
PKD_channel
CorA
Motif
Other DBs
NCBI-GeneID:
130105388
NCBI-ProteinID:
XP_056127350
LinkDB
All DBs
Position
Unknown
AA seq
1452 aa
AA seq
DB search
MLCTSEEKVHPTDVSKIQLGNLIQTSLFSNIEKHWSLAAWIKDNIKKKECCFYVEDAREG
ICKCGYQKNQHCDEAIKPEDYVGEQWHKHRHIRETPTDAFGDISFGGLGQKTGKYVRVSS
DTTCESLYQLMTEQWKLRSPNLLISVTGGAKNFYMKNHLKDKFRRGLIKVAQTTGAWILT
GGTHAGVMKHVGMAVRDYSLSSGLMEGQIVVIGVAPWGVIHNSDTLIHPEGCFPAHYSLD
EQGQDRLSCLDINHTHFLLVDDGTHGHYGTEIELRTNLEGLISQQSLGNRESGVKIPVVC
VVLNGGPGTLDTIYNSMMNNTPCVVLEGSGRLADVIAQVAALPVSKVTLVLIRKLLKRFF
GKEYKSFTDLQVNEWTKKIQDIIRMPRLLTVFRIDEDKNYDVDVAILQALLKASRSDEHA
GRRSWERQLELAVAWNRVDIAESEIFTEESQWTSCDLHPAMFSALVGDKPEFVRLLLENG
VCLRTFLEEKETLCKLYAHLPACFFLRKLAKRAQGVKNISLRHVSEEVRHLLGSFTQPLY
VPSRYKKTKDDVRLTVPSKDPLDLPCSGEDPTALTFWDPGRDLFLWAVVQNNRELAEIGW
EQCRDCIAAALAASKILRKLAQESGEDDNEEAKEMRELANHYEKQAIGVFSECHSWDAQR
AQRLLIRISPLWGKSTCLWLALEADDKSFVAHSGVQALLTQIWFGELSVENPHWKILLCM
IFFPLIYTGFLIFRRDEDIQRRKLAVDPVLAGSPDAKIKRHLRVPVQKSDSELKPLNCSS
RLMSLYTSPQVKFYWNIVSYFGFLWLFAVVLMIDFQTFPSWRELLLYVWLISLVCEEVRQ
LYHDFDGSGFRRKAKMYIRDLWNILDVLSIMLFISGLVCRLQANATVLYVGKVLLCIDFI
IFCLRLMAIFTISRTLGPKIIIVRRMMMDLFFFMFLLSIWVVAYGVAKQSIMIDNEERLN
WIVRGAVYDPYLIIFGNFPTNIDNTQFDKSSCSVDATDPLKPKCPVLNGDNLPMFPEWLT
IIMLCVYLLFANILLLNLLIAIFNYTFQEVQDNTDTIWKFQRYELIKEYHSRPALPPPFI
LLSHLILFIRGALQRDPSERHKHFRQELEQTEEEELLSWEAFMKDNYLVSTRQDESQSVE
HRIQDTAEKVGAMSELLEGEQEMVSTTMAKRLSNLEEQVSESGKALRWIIDALKSQGCKS
KMQPPLMSKSSDRDDGESSGQETDDESAPHTFARQLVYPGSNVVKRFPVPEEKVPWEVNF
SLYNPPVYNPQDSSDSDTSVLDKYRNPEGRTGIRGKGALKSLGPNHILHPIFTRWRDAEH
QVLEFLSVSEDVEKPVTLPGGPAKPDEPLPQTLERILGKKLNDKTKSELKAGEQVYSGYV
DDSRNTDNAWVEATIITLHCDKHTPLMDELNRIVESSASSHQPLKWREVNSTACVCPFQQ
EALRDVAKLHKM
NT seq
4359 nt
NT seq
+upstream
nt +downstream
nt
atgctgtgcacatcagaggagaaagtccacccgacggatgtcagcaaaatccaattagga
aatctgatacagacaagtttattctcaaacattgagaagcactggtcgctcgccgcctgg
attaaagacaacatcaagaagaaagagtgttgcttctatgtggaggatgccagggagggg
atttgtaagtgtggttaccaaaagaaccagcactgcgatgaggccatcaaaccggaggac
tatgttggggagcagtggcacaaacacaggcacatcagagagacgcccaccgatgctttt
ggagatatcagctttggtggacttggacagaaaaccgggaagtatgtccgggtgtcgtcg
gacacgacctgtgagagtctgtaccagctgatgacagaacagtggaaactgcgttcgccg
aacctgctgatttcagtgaccggcggagccaaaaacttctacatgaagaatcacctgaag
gacaagtttcgtcggggtctcattaaagtcgcccagaccacaggtgcgtggatcctgaca
ggaggaacacacgcaggtgtgatgaagcacgtgggcatggccgtgagagattactcactc
agtagtggtttgatggagggacagatcgtcgtcatcggtgtggcaccctggggagtcatt
cacaacagcgacacactgatccatcctgagggctgtttccctgcacactactctctggat
gagcagggccaggaccgtctctcgtgtctcgacatcaatcatactcacttccttctggtg
gatgatggcactcatggacattatggaactgagattgagctgcggaccaatctggaggga
cttatctctcaacaatcactgggaaacagagagagtggcgtgaagataccggtggtctgt
gtggtcttgaatggtggtccaggaactctagacacgatctacaattcaatgatgaacaac
acgccgtgtgtcgtgcttgagggatctggacgcctggctgatgtcattgctcaggtggcg
gccctgccggtgtcaaaggtcactctggtccttatcaggaagctcttgaagaggtttttt
ggaaaagagtacaaaagctttactgatctgcaggtcaatgagtggaccaagaagattcag
gacattatccggatgcctcgtctgctgactgtgtttcgtattgacgaggataaaaactat
gatgttgacgttgctattctacaggctctgctaaaagcctccagaagtgatgaacatgct
ggccgccggtcctgggagagacagctggagctcgcggtggcctggaaccgggtcgacatc
gcagagagtgagatcttcactgaggagagccagtggacgtcctgtgatctgcatccggcc
atgttttctgcactggtgggtgacaaacctgagtttgtgcggctgttgctggagaatgga
gtgtgtctgcgtacgtttctggaagaaaaggagaccctctgtaagctctacgcacaccta
cccgcctgcttcttcctgcgcaagcttgcaaaacgggcccagggtgtcaaaaacatttcc
ttgaggcacgtgtctgaagaagtgcgccacttgctgggaagttttactcaaccgttatac
gtcccttcacgctacaagaaaaccaaagatgatgtccgtttaacggtgccgtccaaagac
ccgctggatctgccgtgttctggtgaagacccgaccgcactcacgttttgggacccggga
cgggatctcttcctctgggctgttgtacagaataaccgagagctggcagagatcggctgg
gagcagtgcagagactgtatcgcagccgctctggccgccagtaagatcttgaggaaactg
gcgcaggagagcggcgaggatgataacgaagaggcaaaagaaatgagagaactggccaac
cactatgagaaacaagccatcggtgtcttcagtgagtgtcacagctgggacgcccagcga
gcgcagagactcctgatccgcatctctccgttgtggggcaaaagcacatgtctgtggctc
gctctcgaggccgatgataaaagcttcgtcgctcactccggagtgcaggccctgctcact
cagatctggtttggagagctgtcagtggagaatccacactggaagattctcctgtgcatg
atcttctttcctctgatatacaccggcttcctgatcttcagacgggatgaagacatccag
agacggaagctggcagtggatccagtcttagctggaagcccagatgccaagatcaaacgt
catttacgtgttcccgtacagaagtctgactctgagctgaagcctctgaactgctcgtca
cgtctgatgagtctctacacgtctcctcaagtcaagttttactggaacatcgtctcgtat
tttggcttcctgtggctctttgctgtggtgctcatgatcgattttcagacatttccgtcg
tggagagaacttctgctctatgtgtggctcatctcgctggtgtgtgaggaggttagacag
ctctatcacgacttcgatgggtccggctttcggaggaaagcaaagatgtacatcagggat
ctgtggaacattctggatgtgctgtcaatcatgctgttcatttctggtctggtctgcaga
ctccaagccaacgccactgtcttgtacgtgggtaaagttctactctgcatcgacttcatc
atattctgtctacgattaatggccatcttcactatcagtcgaaccctgggtccgaaaata
atcattgtcaggagaatgatgatggatttgttcttcttcatgtttctgctcagtatctgg
gtggtggcgtacggcgtggcgaaacagagcattatgatcgacaatgaagagagactaaac
tggatcgtccgtggagccgtctatgacccctacctcatcatatttggcaacttccccact
aatatagacaacactcagtttgataagagcagctgcagtgtggacgccactgaccctctg
aagcccaaatgccccgtgctgaacggcgataacctgccgatgttccccgaatggctgacc
atcatcatgctgtgtgtctatctgctgttcgccaacattttgctgctcaacctcctcatc
gctatcttcaactacacgttccaggaggttcaagacaacacggacaccatctggaagttc
cagcgttacgagttgattaaggagtatcacagtcgacctgctcttcctccacccttcatc
ctcctcagtcacctcatcctcttcatcagaggagcgttgcagcgggacccttcagagaga
cacaagcacttcaggcaggaactagagcagaccgaggaagaggagctgttgtcctgggag
gctttcatgaaggacaactatctggtatctacacgacaggacgagagccagagcgtggag
catcgtatccaggacaccgcagagaaggtcggagcgatgtcagaacttctggagggggag
caggagatggtttcgaccacgatggcaaaacgactttctaaccttgaagagcaggtctca
gagtctggcaaagctttacgatggattatagatgcgctgaaatctcagggatgcaaatcc
aaaatgcagccgccgctaatgagtaaaagctctgacagggacgacggtgaatcgagtgga
caggagacagatgacgaatccgcccctcacacattcgcacgtcagcttgtgtatcccggc
agtaacgtcgtcaaacgctttcctgtgcctgaggagaaggtgccctgggaggtaaacttc
agtctgtacaatcccccagtttacaatccacaggacagcagcgactcagacacttcagtc
ttagacaagtacaggaatccagaaggaaggactgggatacggggaaaaggggctctgaaa
tccctcggcccgaatcacattctccacccaatcttcaccaggtggcgtgatgctgaacac
caagtgctggagtttctctccgtttccgaggatgtagagaagcctgtgactcttcctggg
ggcccagccaaacctgacgagcctcttccacagacactggagaggattctgggtaaaaag
ttaaatgacaagaccaagtctgaactaaaggctggggaacaggtgtatagtggttatgta
gatgacagcaggaacactgataatgcctgggtggaggccaccatcatcacacttcactgt
gacaaacacactccgctgatggatgagctgaaccgcatagttgagagctcggcatcgtct
catcagccgctcaagtggcgggaagtgaacagcaccgcgtgtgtgtgtccattccagcaa
gaggctctacgtgatgtagcaaagcttcacaaaatgtag
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