Rhodococcus koreensis: JWS14_04505
Help
Entry
JWS14_04505 CDS
T07497
Symbol
metH
Name
(GenBank) methionine synthase
KO
K00548
5-methyltetrahydrofolate--homocysteine methyltransferase [EC:
2.1.1.13
]
Organism
rko
Rhodococcus koreensis
Pathway
rko00270
Cysteine and methionine metabolism
rko00450
Selenocompound metabolism
rko00670
One carbon pool by folate
rko01100
Metabolic pathways
rko01110
Biosynthesis of secondary metabolites
rko01230
Biosynthesis of amino acids
rko04980
Cobalamin transport and metabolism
rko04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
rko00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
JWS14_04505 (metH)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
JWS14_04505 (metH)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
JWS14_04505 (metH)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
JWS14_04505 (metH)
04980 Cobalamin transport and metabolism
JWS14_04505 (metH)
Enzymes [BR:
rko01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.13 methionine synthase
JWS14_04505 (metH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S-methyl_trans
Pterin_bind
Met_synt_B12
B12-binding
B12-binding_2
CdhD
Motif
Other DBs
NCBI-ProteinID:
QSE78454
LinkDB
All DBs
Position
complement(991236..994805)
Genome browser
AA seq
1189 aa
AA seq
DB search
MSAPFHSALLDALNQRVVIGDGAMGTMLQAADLTLDDFLGLEGCNEILNDTRPDVLKEIH
RAYFEAGADAVETNTFGCNLPNLADYDISDRIRELAEKGTRLAREVADEMGPGRDGMGRF
VLGSMGPGTKLPTLGHAPFAILRDAYAEAAMGMIDGGADAILVETCQDLLQVKAAILGSQ
RAMETLGSRLPIITHVTVETTGTMLLGSEIGAALTALEPLGIDMIGLNCATGPAEMSEHL
RHLSKYSSLPVSVMPNAGLPQLGPKGAEYPLTAEELAEALSGFVTEFGLGLVGGCCGTTP
EHIRQVAEAVRLVEKAARNPVHESGTSSLYTAVPFEQDASILMIGERTNSNGSKAFREAM
IAEDYQKCLDIAKDQTRDGAHMLDLNVDYVGRDGAADMAALASRFATSSTLPIMLDSTEP
AVLQAGLEHLGGRCAVNSVNYEDGDGPDSRFQKIMRLVKEHGAAVVALTIDEEGQARTAE
HKVRIAERLLDDITVNWGLDESDIIIDALTFPISTGQEEVRRDGIETIEAIRELKKRHPR
VHFTLGVSNISFGLNPAARQVLNSVFLHECTEAGLDTAIVHASKILPMARIPDEQRETAL
DLVYDRRREGYDPLQKLMELFEGVSAASARESRAQELAALPLFERLERRIVDGERNGLDD
DLTAAMEEKPPLAIINETLLSGMKTVGELFGSGQMQLPFVLQSAEVMKAAVAYLEPHMEA
TDEDGKGRIVIATVKGDVHDIGKNLVDIILSNNGYDVVNLGIKQPIATILDAAIEQKADV
IGMSGLLVKSTVVMKDNLQELNAKGVAEKFPVLLGGAALTRSYVENDLAEVYEGDVSYAR
DAFEGLHRMDEIMAVKRGGGPDPDSPEAIAAREKAAERKARHERSKRIAEKRKAAETPVE
VPERSDVATDIVVPSPPFWGNRIVKGVSLSDYAGLLDERALFLGQWGLRGQRSGDGPTYE
ELVETEGRPRLRYWLDRLSTEGILAHAAVVYGYFPAVSEGDDVVVLTDPAPDADERFRFT
FPRQHRDRFLCVADFVRSRTEAKETGQVDVFPMQLVTMGQPIADFANELFAANAYRDYLE
VHGIGVQLTESLAEYWHRRVREELVLPGGHNVAEQDPSEVSGFFDLAYRGARYSFGYGAC
PNLEDRAKMVALLEPERIGVKLSEELQLHPEQSTDAFVLHHPEAKYFNV
NT seq
3570 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcgccatttcactctgccctgctcgatgcgttgaaccagcgcgttgtcatcggc
gacggagccatgggcaccatgttgcaggccgcggacctcacgctcgacgacttcctcggg
ctcgaaggctgcaacgaaatcctcaacgacacccgccctgacgtgctgaaagagatccac
cgcgcgtacttcgaggccggggccgacgctgtcgagaccaacacgttcgggtgcaacctc
cccaacctcgccgattacgacatttcggaccgtatccgggaactggccgagaagggcacc
cggttggcgcgtgaggtcgccgacgagatggggccgggacgcgacggcatgggccgcttc
gtcctcggctcgatggggcccggaaccaagctgccgacgctcggccacgcgccgttcgcg
atcctgcgcgacgcctacgccgaggccgcgatgggcatgatcgacgggggcgccgacgcg
atcctcgtcgagacctgccaggacctgctgcaggtgaaggcggcgatcctgggcagtcag
cgggcgatggagacgctggggtcgcggctgccgatcatcacccacgtcacggtcgagacc
accggcacgatgctgctcggcagtgagatcggtgccgcgctgaccgcgctcgaaccgctc
ggtatcgacatgatcgggctcaactgcgcgaccggtcccgccgagatgagcgaacatctc
cgccacctgtccaagtacagttcgctccccgtatcggtgatgcccaacgccggactgccg
cagctcggcccgaagggtgccgagtacccgctcaccgcggaggaactcgccgaggcgctc
agcggcttcgtcaccgagttcggtctcggtctggtcggcggctgctgcggcaccaccccg
gagcacatccggcaggtggccgaggcggtccgcctcgtcgagaaggccgcgcgcaacccg
gtgcacgagtcggggacgtcgtcgctgtacacggcggtgccgttcgagcaggacgccagc
atcctgatgatcggcgagcgcacgaactccaacggctccaaggcatttcgtgaggcgatg
atcgccgaggactaccagaagtgcctcgacatcgcgaaggatcagacccgcgacggcgcc
cacatgctcgacctcaacgtcgactacgtcggacgtgatggcgccgccgacatggccgcc
ctcgcgagccggttcgcgacgtcgtcgacgctgccgatcatgctcgactccaccgagccc
gcggtcctgcaggccggtctcgaacacctcggcggccggtgcgccgtcaactccgtcaac
tacgaggacggcgacggaccggactcgcggttccagaagatcatgcggctcgtcaaggaa
cacggcgccgccgtcgtcgcgctgaccatcgacgaggagggccaggcgcgcaccgcagag
cacaaggtccgcatcgccgagcgcctgctcgacgacatcaccgtgaactggggcctcgac
gagtccgacatcatcatcgacgcgctgaccttcccgatctccaccggtcaggaagaggtc
cgccgcgacggcatcgagacgatcgaggcgatccgcgaactgaagaagcggcacccgcgg
gtgcacttcaccctcggcgtgtccaacatctcgttcggtctcaaccctgccgcccgtcag
gtcctgaactcggtgttcctgcacgagtgcaccgaggccggcctcgacacggccatcgtg
cacgcgtcgaagatcctgccgatggcacggatccccgacgaacagcgcgaaacggccctc
gacctggtctacgaccgccggcgcgagggctacgacccgctgcagaagctgatggagctg
ttcgagggcgtctccgcggcgtcggcacgcgaatcccgcgcccaggaactggcggcgctg
ccgctgttcgagcggctggaacggcgcatcgtcgatggtgagcgcaatggcctcgacgac
gacctcaccgcggcgatggaagagaagccgccgctcgcgatcatcaacgagaccctgctg
tccggcatgaagaccgtcggcgaactcttcgggtccgggcagatgcagttgccgttcgtg
ctgcagtccgccgaggtgatgaaggcggccgtggcgtacctcgaaccccacatggaggcc
accgacgaggacggcaagggccgcatcgtcatcgccaccgtgaagggcgacgtccacgac
atcggcaagaacctcgtcgacatcatcctcagcaacaacgggtacgacgtggtgaacctc
ggcatcaagcagccgatcgcgacgatcctcgacgcggcgatcgagcagaaggccgacgtc
atcggcatgtccggtctgctcgtgaagtcgaccgtggtgatgaaggacaacctgcaggaa
ctcaacgccaagggagtcgcggagaagttccccgtcctcctcggcggtgctgcgctgacc
cgctcatacgtggagaacgatctggccgaggtgtacgagggcgacgtcagctacgcgcgc
gacgcattcgagggcctgcacaggatggacgagatcatggccgtcaaacgcggcggcgga
cccgacccggacagcccggaagcgatcgccgcccgggagaaggcggccgagcgcaaggcg
cgccacgaacggtccaagcggatcgcggagaagcgcaaggccgccgagaccccggtcgag
gtgccggaacggtccgacgttgccaccgacatcgtcgtcccgagcccgccgttctggggc
aaccggatcgtgaagggtgtctcgctgtccgactacgccggactgctggacgagcgcgcc
ctgttcctcgggcagtggggcctgcgcgggcagcgttccggcgacggacccacctacgag
gaattggtggagacggagggccgcccgcgcctgcggtactggctcgaccggctgagcacc
gagggaatcctcgcgcacgccgccgtggtgtacggctatttccccgccgtgtccgagggc
gacgacgtggtcgtgctcaccgacccggcgcccgacgcggacgaacgcttccggttcacg
ttcccgcgccagcaccgcgaccgcttcctctgcgtcgccgacttcgtgcggtcccgcacc
gaggcgaaggagaccggccaggtcgacgtgttcccgatgcagctggtcaccatggggcag
ccgatcgcggacttcgcgaacgagctgttcgccgccaacgcgtaccgcgactacctcgag
gtgcacggcatcggcgtgcagctgacggagtcgctggccgagtactggcaccgacgggtc
cgcgaagaactcgtgctgcccggcggccacaacgtcgccgagcaggatccgtcggaggtg
tccgggttcttcgacctcgcctaccgcggcgcccgctactcgttcggctacggcgcctgc
cccaacctggaggaccgcgcgaagatggtcgctctcctcgaaccggaacggatcggtgtg
aagttgtcggaggaactgcagttgcatcccgagcagtccacggatgcgttcgtgctgcac
caccccgaggcgaagtacttcaatgtctga
DBGET
integrated database retrieval system