Rhodococcus koreensis: JWS14_05680
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Entry
JWS14_05680 CDS
T07497
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
rko
Rhodococcus koreensis
Pathway
rko00300
Lysine biosynthesis
rko00550
Peptidoglycan biosynthesis
rko01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rko00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
JWS14_05680
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
JWS14_05680
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rko01011
]
JWS14_05680
Enzymes [BR:
rko01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
JWS14_05680
Peptidoglycan biosynthesis and degradation proteins [BR:
rko01011
]
Precursor biosynthesis
Amino acid ligase
JWS14_05680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
QSE78672
LinkDB
All DBs
Position
complement(1242254..1243867)
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AA seq
537 aa
AA seq
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MPVPSRPQSASVEAKVTDGLRPAQPVRTTVSALAALAGARVEAPTGTAEHVIVTGVDLRA
QGIMEGDLFAALPGARAHGAEFAADALERGATAILTDEAGFALVSALGTDAPVLVHDDPR
GVLGELSATIYGRPSEKMQVIGITGTSGKTTTSYLVEGALNAAGRTTGLVGTIETRMSGR
RVPSALTTPEAPQLHALFAVMLEQGIDTVVMEVSSHALSLGRVDGVRFDVGAFTNLSQDH
LDFHRDFEDYFAAKARLFAADSSVHAQYAVICVDDVWGRRMAEVARGAHSIVTTVATTPV
TDGAVWTAGPATVSASGSQTFALTTAEGTALDVELRLPGQYNVANASLAVALCAALGVDP
RDAVSGIAGVDVPGRVQRIDRGQDFLAVVDYAHKPAAVEAVIATLREQVRGRVAVVVGAG
GDRDAGKRPLMGAAAARGADLLIITDDNPRTEDPAKIRAAIREGALGVPESERGQVWEVA
DRAKAIADAVGWAQAGDVVLVAGKGHEIGQEIHGVKYPFDDRDVLGDAIERQVGGTR
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
gtgcctgttccgtcccgcccgcagtcggcgtcagtggaggcgaaggtcacagacggtctt
cgccccgcccagccggtccgtaccacggtgagcgctctggccgcgctcgccggagcgagg
gtcgaggcacccaccggaaccgccgagcacgtgatcgtcaccggggtggatctgcgcgcc
caggggatcatggagggcgatctgttcgcagcccttccaggggcccgcgcgcacggcgcg
gagttcgccgccgacgctctcgaacgcggagccaccgcgatcctcaccgacgaggccgga
ttcgcgctggtgtccgcactgggcaccgatgctccggtgctcgtccacgacgacccgcgc
ggcgtgctcggtgagctatcggccaccatctacggtcgcccctcggagaagatgcaggtc
atcggcatcacggggacgtcggggaagaccaccacctcgtatctcgtcgaaggcgccctc
aacgcggcaggccggacgacgggtctcgtgggcacgatcgagacccggatgagcggccgc
cgggtgccgagcgccctgacgacccccgaggcgccgcaactccacgcgctgttcgccgtg
atgctcgagcaggggatcgacaccgtcgtcatggaggtgtccagccacgcgctgtccctc
ggccgcgtcgacggagtccgcttcgacgtgggcgcgttcaccaacctctcccaggaccac
ctggacttccaccgcgacttcgaggactacttcgccgccaaggcgcggctcttcgcggcc
gactcgtccgtgcacgcgcagtacgccgtcatctgcgtcgacgacgtgtggggccggcgg
atggccgaggtcgcgcgcggcgcccactcgatcgtgacgacggtcgcgacgacgccggtg
accgacggcgcggtgtggacggcgggcccggcgacggtgtcggcatccggctcgcagacg
ttcgcgctcaccaccgccgagggcacggcgctcgacgtggaactccggctgccggggcag
tacaacgtcgcgaacgcttcgctcgccgtcgcgttgtgcgccgcgctgggcgtcgatccg
cgcgacgccgtctccggtatcgccggggtcgacgtgccgggccgggtgcagcggatcgac
cgggggcaggattttctcgccgtcgtcgactacgcgcacaagcccgccgcggtggaggcc
gtgatcgcgacgctgcgcgagcaggtccgcggccgcgtcgccgtcgtcgtgggtgccggg
ggcgatcgcgacgcgggtaagcggcccctgatgggcgccgcggccgcgcggggagccgac
ctgctgatcatcacggacgacaacccgcgtaccgaggatccggcgaagatcagggccgcg
atccgcgagggcgccctcggggtgcccgagtccgagcggggacaggtgtgggaagtagcg
gaccgagcgaaggcgatcgccgacgccgtcggctgggcgcaggcaggcgacgtggttctg
gtcgcaggcaagggacacgagatcggtcaggagatacacggggtgaagtacccatttgac
gaccgcgacgtactgggcgacgcgatcgagcgacaggtcggaggaacgcgatga
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