Rhodococcus koreensis: JWS14_23415
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Entry
JWS14_23415 CDS
T07497
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
rko
Rhodococcus koreensis
Pathway
rko03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rko00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
JWS14_23415 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rko03400
]
JWS14_23415 (nth)
Enzymes [BR:
rko01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
JWS14_23415 (nth)
DNA repair and recombination proteins [BR:
rko03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
JWS14_23415 (nth)
Prokaryotic type
JWS14_23415 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
Herpes_UL56
Motif
Other DBs
NCBI-ProteinID:
QSE81892
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All DBs
Position
5109646..5110491
Genome browser
AA seq
281 aa
AA seq
DB search
MSQKRHSSNSDRSGIRRVDPVHATPSDGSEVRGRTRSRAAKQEETRLGLVRRARRMNRRL
AEAFPHVYCELDFTTPLDLAVATILSAQCTDVRVNMVTPALFARYPDAKAYAEAERTELE
EYIRSTGFYRNKTNSLIGLGQALLERFDGEVPGNLKDLVTLPGIGRKTANVILGNAFDVP
GITVDTHFGRLVRRWKWTEEEDPVKVEHAIGALIERKEWTLLSHRVIFHGRRVCHARKPA
CGVCVLAKDCPSYGLGPIDPDVAAELVRGPETEHLLRLAGR
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgtctcagaagcgacacagcagcaattcggatcggtcgggtatccgtagagttgatccc
gtgcatgcgacccccagcgacggctccgaagtgcgtggacgcacccgttcgcgggccgcg
aagcaggaagaaacccgactcggactcgtccggcgcgcccggcggatgaaccgcaggctc
gccgaggccttccctcacgtctattgcgaactcgacttcaccacacccctggacctcgcc
gtcgcgacgatcctgtccgcgcagtgcactgacgtgcgggtgaacatggtgacgccggcg
ctgttcgcccgctaccccgatgcgaaggcatacgcggaggccgaacggaccgaactcgag
gagtacatccggtccacgggtttctaccgcaacaagacgaactcgctgatcgggctcggg
caggctctgctcgaacgcttcgacggcgaggtccccggcaatctgaaggacctcgtgacg
ctgcccgggatcggccggaagacggccaacgtgatcctcggcaacgcgttcgatgtgccg
ggaatcaccgtcgacacccacttcggccggctcgtgcggcggtggaagtggaccgaggag
gaagacccggtcaaggtcgagcacgcgatcggcgccctgatcgagcgcaaggagtggacg
ctgctctcgcaccgggtgatcttccacggcaggcgcgtctgccacgcccgcaagcccgcc
tgcggggtgtgtgtgctcgccaaggactgtccgtcgtacgggctcggcccgatcgacccg
gatgtcgccgccgaactggttcgtggaccggagacggagcatctgctgcgtctggccggc
aggtga
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