Candidatus Rickettsia kotlanii: FLA4_02050
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Entry
FLA4_02050 CDS
T09157
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
rkt
Candidatus Rickettsia kotlanii
Pathway
rkt03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rkt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FLA4_02050 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rkt03400
]
FLA4_02050 (nth)
Enzymes [BR:
rkt01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
FLA4_02050 (nth)
DNA repair and recombination proteins [BR:
rkt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
FLA4_02050 (nth)
Prokaryotic type
FLA4_02050 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
HHH_5
RecR_HhH
SdiA-regulated
Motif
Other DBs
NCBI-ProteinID:
BDU59795
LinkDB
All DBs
Position
183022..183654
Genome browser
AA seq
210 aa
AA seq
DB search
MQAQIINKIFEIFSKNNPNPKTELIYKNDFTLLVAVILSAQASDISVNLATKSLFETYDT
PEKILELGEEGLKKYIKSIGLFNSKAKNIIALCKILISNYQASVPNDFKELIKLPGVGRK
TANVVLNCLFGMPTMAVDTHVFRVAKRIKLAKGGTPEIVEKELLQIIDKKWLTHAHHWLI
LHGKYICKARKPDCEICPIKEHCDYYFNLK
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
atgcaagcacaaataattaataaaatttttgagatttttagcaagaataatccaaatccg
aaaaccgaattaatatataagaatgattttaccttactagtagcggtaatattatctgct
caagccagcgatatatcagtaaatttagcaactaaatctttatttgaaacttatgataca
ccagaaaaaattttagaactcggcgaagaaggacttaaaaaatatataaaatctatcgga
ctatttaacagcaaagcaaaaaatattatcgcattatgtaaaatattgatcagcaattat
caagcttcagtaccgaatgattttaaggaattaattaaactaccgggcgttggcagaaaa
actgctaatgttgtactaaattgcttattcggcatgcctacaatggcagttgatacgcat
gtctttagagtagccaaaaggatcaaacttgctaaaggcggtactcctgaaatagtagaa
aaagagctactgcagattatcgataaaaaatggctaacacatgcccatcactggctaatt
ctgcacggcaaatatatatgcaaagctagaaaacccgattgcgaaatctgccctattaaa
gagcattgcgattattattttaaccttaaataa
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