Rubripirellula lacrimiformis: K227x_04250
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Entry
K227x_04250 CDS
T07352
Symbol
nth_1
Name
(GenBank) Endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
rlc
Rubripirellula lacrimiformis
Pathway
rlc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rlc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
K227x_04250 (nth_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rlc03400
]
K227x_04250 (nth_1)
Enzymes [BR:
rlc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
K227x_04250 (nth_1)
DNA repair and recombination proteins [BR:
rlc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
K227x_04250 (nth_1)
Prokaryotic type
K227x_04250 (nth_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
Motif
Other DBs
NCBI-ProteinID:
QDT02054
UniProt:
A0A517N4J2
LinkDB
All DBs
Position
557744..558430
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AA seq
228 aa
AA seq
DB search
MGRAPLGADEIEQVFRILSKEMPGRVPGAMGPKRQPNPFRSCISCMLSAQSRDANTAAAT
KALFRLARMPRTMLQLSDQQITHAIKPCGLYNLKARNIRKFCQALLRDFDGVVPETRGQL
MQLPGIGRKCADIVMQFAFGVDTIAVDTHVHRVCNRTGIAIGKTAEQTAIALEQTAPAWV
FKEGHFWLIQFGKRVCLARSPKCRTCPIRHLCQKRAADLRRGDATDTK
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atggggcgggctccactcggcgcagacgaaatcgaacaggtcttccgaattctttcgaaa
gaaatgcccggccgggtgcccggggcgatggggcccaagaggcagccaaacccgttccgg
tcttgcatctcgtgcatgttgtcggcgcagtcacgtgacgccaacacggcggcggccacg
aaggcattgttccggctcgcacgcatgccgcgaacgatgttgcagctaagcgaccagcag
atcacccatgcgatcaagccctgcggcctctataatctcaaagccagaaacatccgtaag
ttctgccaggccctgcttcgcgattttgatggtgtggtccctgaaacgcgcgggcaattg
atgcagttgcccggtatcggacgcaagtgcgccgatattgtcatgcagtttgcgtttggg
gttgatacgattgcggtcgacacgcatgtccaccgagtctgcaatcggacaggcatcgcg
attggcaaaactgccgaacagaccgcgatcgcactcgagcagacggcacctgcttgggtg
ttcaaggaaggccatttttggctgatccagtttgggaaacgtgtttgcctcgctcgatcg
cccaaatgcaggacttgtccaatccggcacctttgtcagaagcgggcggcggatctgcgg
cgcggcgatgcgacggataccaaatga
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